Xenopus tropicalis (tropical clawed frog): 100496743
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Entry
100496743 CDS
T01011
Name
(RefSeq) vacuolar protein 8
KO
K08332
vacuolar protein 8
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
100496743
03029 Mitochondrial biogenesis [BR:
xtr03029
]
100496743
Membrane trafficking [BR:
xtr04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Other Cvt associated proteins
100496743
Other autophagy associated proteins
Micronucleophagy
100496743
Mitochondrial biogenesis [BR:
xtr03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
100496743
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
HEAT
HEAT_2
HEAT_EZ
DUF383
Cnd1
ARMC9_ARM
Motif
Other DBs
NCBI-GeneID:
100496743
NCBI-ProteinID:
XP_031758122
UniProt:
A0A803JKZ6
LinkDB
All DBs
Position
5:58691801..58741243
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AA seq
579 aa
AA seq
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MGLLCQRCLELLLDIVNFVKRLSSRIVERIKECMVLVRECCCMKPKSFKVRHLYEPVLPN
HEKQAAQEFLNHLEAGLGERQLGKETLDALRILAFSENADLQQSAALYYLHMSQHMTAKL
PQEFLEPYQALLQSSDLEVQQMSSLSLVNFLLEGYLNKELVVQVGLLEPVLELLESGDSA
VQCNSCACIMMLAVSESNREAIGIAGGIRPLLTLAKSYDPRVQQNAVGAILNLTRSEHIK
SILCRQGALPVLILLLQSPDSDIQYYSCASLGNIAANADHHEAMMEIGDKFLLRMLVSLM
SSSVQKVSSQACLCLNNLASNAEIRTHIHALDIIHLLLILLNSSSKDVRQASITLLCTMT
HPPGNMNAVLCKELLTHLVVLMQRERTNPVVVVHAACTIQNLSQSENIEVIIQSQCFEEL
LQALLDPNNEEETLQYLASCLSELAKHDITRECLIDKKDKGLIRCLVKLAGLVEHKELSF
HAASVIKQLSHYGKISAELKFLIKDVQHYLMCFLSHPELRFQQLSIATLCTLSEDTEFST
VISQSQLKEQLEQLRKQTEDTQALLRLTLSQTESADSTK
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgggtctcctgtgtcaaaggtgcttggagctcttgctagatattgtgaactttgtcaag
agactctcctccagaattgtggagcgtatcaaggagtgtatggtgcttgtacgtgagtgc
tgctgcatgaaacctaaaagcttcaaagtcaggcatctatatgagcctgtccttccgaac
catgagaagcaagctgcccaagagttccttaatcacctggaagcgggactgggagagaga
cagcttggcaaagaaacactggatgccctgaggatcttggctttttctgaaaatgcagat
ctgcagcagtctgcagctctctattatctacatatgagccagcacatgactgccaagttg
ccacaagaatttttggagccatatcaagctttgctgcagtctagtgatttagaagttcag
cagatgtcttccttgtcactcgtgaactttttgcttgagggatatttgaacaaagagctt
gttgttcaggtgggactactggaaccagttctggaacttctggaatcgggagactctgct
gtgcaatgtaactcatgtgcttgcattatgatgcttgcagtctctgaatccaaccgagag
gctataggaattgctggaggcatcaggccattactgacattagccaagtcctatgatccc
agagtgcagcaaaatgctgttggagctattttgaacttgactcgatcagaacatatcaag
agtattctttgcagacagggagccctgccagtactgattcttcttttgcaatctcctgac
tctgatatccagtactacagttgtgcctccctgggtaacattgctgcaaacgccgaccac
catgaagctatgatggaaattggtgacaaatttcttctccgaatgcttgtctctctgatg
tcttcatctgttcaaaaggtatcaagccaagcatgcctttgtctgaataacctagcttca
aatgctgaaattcggactcatatccacgccctggacatcatacacctgctactgatcttg
cttaactcaagcagtaaagatgtccgacaggcttctattactcttctctgcactatgacc
catcctccaggaaacatgaatgctgtcttgtgtaaggaactgcttactcatctagtagtg
ctgatgcagagagagaggaccaatccagtggttgtagtccatgcagcctgcactatacag
aacttgagccagtctgagaacatagaggtgatcatacagagccagtgctttgaggaattg
cttcaagctctccttgatcctaacaatgaagaagaaaccttacagtatttggcatcatgt
ctctcagagctggctaaacatgacatcacaagggagtgtttgattgataaaaaggacaaa
ggactgatcagatgtctggtgaaactggcaggactagtggagcacaaagagctctccttc
catgcagcctctgttatcaagcaactttcacattatggaaaaatatcagcagagttgaaa
tttttaataaaggatgttcagcactacctcatgtgttttcttagccatccggaactacga
tttcagcagctcagtattgccacactttgcactttgagtgaagatactgagttctccaca
gtaatcagtcaaagtcagctaaaggagcagcttgagcaactccggaagcagacagaagac
actcaggcactgctgagactgacactcagtcaaactgaatctgcagactcgactaaatga
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