Xenopus tropicalis (tropical clawed frog): 100496782
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Entry
100496782 CDS
T01011
Symbol
abca9
Name
(RefSeq) ATP-binding cassette sub-family A member 8-B
KO
K05651
ATP-binding cassette, subfamily A (ABC1), member 9
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
100496782 (abca9)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xtr02000
]
100496782 (abca9)
Transporters [BR:
xtr02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
100496782 (abca9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
RsgA_GTPase
DUF4162
AAA_30
AAA_15
AAA_22
AAA_29
SRP54
AAA_25
AAA_23
DO-GTPase2
Motif
Other DBs
NCBI-GeneID:
100496782
NCBI-ProteinID:
XP_031750505
Xenbase:
XB-GENE-6464273
UniProt:
F6PPE6
LinkDB
All DBs
Position
10:33227614..33318366
Genome browser
AA seq
1608 aa
AA seq
DB search
MVELKLSETSLFQQTVALFWKNLLLKWRRKWHSTLEWLQNLAFVFLMFLTIVIGFNGPTS
NTDLSPARVLGRLDAFYNFSVGYVRTTSISRDIMEKVAQSIIIPDVKVEEFADEEELMKA
FHNTSMVAVTFVDKFSYHIRYRMHVMGHPSDYFAFMGHCGNDLLYCLPTYYWSEGFLSLQ
ASIDSAIIEVTSNHSVWNNMASIVAIKMKSAQLTYRRLVHVASFVFVMPMCYVSLIYLLS
LYVTRERYEMKETLRLMQLKDLAFWLSWGLLYAGYILIVANLMTLITKPFIFMTSSYGVI
MFLFFLYGVALMSFTFMLSALFRSPRATAVAGFFITLFLSAVGLVLLRKDFPQALAVLLS
IFPQFAFAVGLLQSVHMDSDLEGVYFSDLMGDSSHMLSCFISLVLDSVFYMILTLYFEKV
LADKHGVKHEPLFFLKASYWSKEKPSPLMGQTDYSGESSLGDFVEKVPDDLHGKEAIRIH
GVKKTFSDKDKSTEALRGLDLNIYEGQITALLGHSGAGKTTLLNILSGMYPASGGSATIC
NYKLSNMRHLEEIKKRVGFCPQGDIKFDPLTVKENLMVFAMIKGIPTKQVAHKVQKVLSD
LQMNDIENTEAITLSGGQRRKLTFGIAILGDPQVLLLDEPTAGLDPCSRHHVWTILKENK
ADRVTLFSTQFMDEADILADRKAVISKGRLKCVGSSLFLKRKWGIGYHLRMQVSPSCDVE
LMTSIIKQRIPSAKLTAQNEEELTYALPFENMDVFPDLFSHLDGQVGNSIVSYGVSMTTL
DDVFLKLEGEGEIESGDYDVFNPESRTAEDRYDISAEMEESLLLMSDSGNVTLSGWELWR
QQVLAVARIRFLKLRHDTKSLRSILLLLVLFILASILSIIMAHISNKFISWELTPSLYFQ
SPGSRLNKYYTDLLIHNNTGSSIDDFIGAVKEQNIAVQVANGKYDMDTIKYRGAIEVSQA
EKGYNFTIVANPKAHNALPVLLNIISNALLKVFKVSEHVRVWNHPITMDEMDIHHKTYIS
IMFFMIFASGLSPHIAMSSTEDNRINARTQLRLAGLFPSAYWFGQALVDVILYWSLLFLM
TAILFAFNNYSYFLLNFITAMVMIAGMFGYGMAVILYVYVISFIFGKGKIHRDSWSLFFV
IITFFPASNEISIFPWFYIYLFIFPVTTLYGIMDYTEDLQFLQEADNFILPCTPYLHIII
FFGLLWFLEWKFGLRSLTTDPLFRISRRNMTVKKNPEELGNDVDEDVLAEKERVKNAATV
ANVEEKPVIIVDSLRKEYKVKKRGSFFKKNRKAATKNISFCVRKGEVLGLLGPNGAGKTT
SMYMLAGEVKPTAGEVVLCGNDPAESTGFLGYCPQDNPLWPNLTVKEHLEIYAAVKGMKK
EDAYIAINRVAAALELKEHMGKESRKLSLGESRKVCFAISMIGNPNIVLLDEPSTGLDPK
AQQRLWRAIRAAFKNKDRGAILTTHYMEEAEAVCDRVAIMVSGKLRCIGSIQQLKSKFGK
GYLLEIKVKETHQVDQIHNEIIRIFPHAARQDRFSSLLVYKIPMDNVQSLSQAFLLLEEA
KRAYNIEEYSFSQSTLEQVFIELAKEQEKEDFELNNTFQWRHLRAESI
NT seq
4827 nt
NT seq
+upstream
nt +downstream
nt
atggtggaattaaagctgagtgagacaagcctattccagcagacagtggcattgttctgg
aagaacctgcttctgaaatggaggaggaagtggcacagcaccttggaatggctgcagaac
ttggcctttgtgttcctgatgtttctaacaattgtcatagggtttaatggacccacatca
aatactgatctatcccctgcacgggttcttggccgtttggatgcgttttacaatttctct
gttggatatgtgcgcactacctctatatccagggatatcatggagaaggtggcccaaagc
atcattatacctgatgtaaaggtcgaagaatttgcagatgaggaggaactaatgaaggct
tttcataatacgtcaatggttgcagtcacctttgtggacaaattcagttaccatatccga
taccggatgcatgtaatgggacatccaagtgattactttgcttttatgggtcactgtggc
aatgacttgttatactgccttcctacatactactggtcagagggcttcctttctctgcaa
gcaagtattgactctgctattattgaagttaccagcaatcattccgtatggaacaatatg
gcttctatcgtggcaattaagatgaaatctgctcaactgacttatagacgactggtgcat
gttgcatcatttgtatttgttatgcccatgtgctatgtctcgctgatatacctattatcc
ctctatgtgacaagagagaggtatgaaatgaaggagacactaaggctgatgcaacttaaa
gacttagcattttggttatcctggggattgctttatgccggttatatattaatagtggcc
aacctgatgactctgatcacaaaaccttttatatttatgacaagttcctatggtgtcatc
atgtttcttttctttctgtatggagtcgctctgatgtcattcaccttcatgctgagcgcc
ctgtttcggagtcccagagcaacagccgttgctgggtttttcatcacactcttcctttct
gctgtgggtctcgtactactaagaaaagattttcctcaagctcttgcagtcttattgagc
atcttcccccagtttgcctttgcagttggattactgcagagtgttcatatggatagtgat
ctagaaggtgtctacttctctgacttgatgggggattcctctcacatgctatcctgcttt
atcagccttgttctcgattcggtattttacatgatcctcacactgtattttgaaaaagtt
cttgcagataaacatggagttaagcacgagccattgtttttcctaaaagcttcttattgg
tccaaagagaagccgtctccactaatgggacaaactgattatagcggtgaatcctcattg
ggagactttgttgaaaaggtccctgatgatttacatggaaaagaggccatcagaatccat
ggagttaagaaaaccttctctgacaaagacaagagcactgaggctttgagaggtctagat
ctaaatatctatgaggggcagattacagccctgcttggtcatagcggagctggtaaaacg
acactactaaatatccttagtggaatgtatccagcttctggcggatctgcaactatctgc
aattataaactctctaacatgaggcacttggaagagataaagaaaagggttggattttgc
ccacagggtgacattaagtttgaccctttaactgtgaaggaaaatttaatggtctttgca
atgatcaaagggatcccaacaaagcaagtagcacataaggtccaaaaagttctgtcggac
ttgcagatgaatgatattgaaaacacagaagctattacattaagtggtggacaaagaaga
aaattaacttttggaattgctattttaggagatcctcaggttctacttcttgatgaaccg
actgctggtttggacccatgttccaggcaccatgtatggaccattttaaaagagaacaaa
gcagatcgagtcacactcttcagcactcagttcatggatgaggcagacatccttgctgat
cgaaaggctgtgatctctaaaggaaggttaaaatgtgttggatcctccttgtttctcaag
agaaagtggggcattgggtatcacttaaggatgcaagtgtctccatcatgtgacgtggag
cttatgacatcgatcattaagcagcgcatacccagtgctaagctcacagcgcaaaatgaa
gaggagcttacatacgccttgccctttgaaaatatggatgttttcccagatttatttagt
catttggatggccaagtaggtaacagcatagtcagctatggagtctctatgacaaccctg
gatgatgtatttttaaaactagaaggggaaggagagatagaaagtggagattatgatgtt
tttaacccagagtctaggacagctgaagacagatatgatatttctgctgaaatggaagag
tcacttttactgatgtcggactctggaaatgtgacactaagtggctgggaactgtggaga
caacaagtgttggctgttgcaaggattcgatttctgaagttaagacatgacactaaaagc
ttgagatctatattgttacttcttgttctttttattctggcttcaattctaagcattata
atggctcatatttccaataaatttatttcttgggaacttactccaagcctctactttcaa
agtcctggtagtcgactaaacaaatactacacagatttgctgattcataacaacactggt
tcatctattgatgactttattggtgcagtgaaagaacagaatatagcagtacaagtggcc
aacggcaaatatgacatggatactataaagtacagaggagcaattgaagtctctcaagcg
gaaaagggctataattttaccattgtggcaaaccccaaggcacataatgcactaccagta
cttctaaatatcatcagcaatgctcttttgaaggtttttaaggtctcagaacatgtccgt
gtgtggaaccacccaataactatggatgaaatggatatacatcataaaacatatatatca
attatgttttttatgatttttgcatctggtctatcccctcacattgcaatgagcagcact
gaggacaacaggatcaatgctcgcactcagctgaggctcgctggtctctttccctctgca
tactggtttggccaagcgcttgtggatgtcattctctattggagtttactcttcctgatg
acggccatactttttgcatttaacaactactcctactttctattaaatttcatcactgct
atggtgatgatcgctggcatgttcggctacggcatggctgtgatcctgtatgtttacgtc
atctcctttatttttgggaaaggaaaaatccaccgggacagctggtcattattctttgtt
ataattacttttttcccagctagtaatgaaatatctatatttccctggttctatatatac
ttattcatttttcctgtgaccacactatacggaatcatggactacactgaagatcttcag
tttcttcaagaagcagacaattttatcttgccgtgtacgccatacctgcatatcatcata
ttctttgggctactttggtttttggaatggaagtttgggttgagaagcctgacaactgat
cccttattcagaatctccagaagaaatatgacagtcaagaaaaatccagaagagctgggt
aatgatgtggatgaagatgtgttggcagaaaaagagagagtaaaaaatgccgcaaccgtt
gccaatgtggaagagaaaccagtgattattgtagacagtctgcgcaaggagtataaagtc
aagaaaagaggatcctttttcaagaagaacagaaaagctgccactaaaaacatctccttt
tgtgtcaggaaaggtgaggtcctaggactgctagggccaaatggagctggaaaaaccaca
tccatgtacatgctggctggagaagtaaagccaactgcgggagaggtagttctctgtggg
aatgacccagctgagtccactggctttcttggctactgtccccaagacaatcctctatgg
cccaatctgactgtgaaagaacatttagaaatctatgctgctgtgaagggcatgaagaag
gaggatgcatatattgcaatcaatcgagttgcagcagccttggagcttaaagaacatatg
ggaaaagaatccagaaagctgtctcttggggagtccagaaaggtgtgctttgccataagc
atgataggtaaccccaacattgtccttctggatgaaccttcaactggactggaccctaaa
gctcagcagcgtctttggagagctataagagcagcttttaaaaacaaagaccgaggagca
attctgaccactcactacatggaggaagctgaggctgtctgtgaccgggtagccatcatg
gtgtctgggaagctcagatgcattgggtcaatccagcagctgaagagcaagtttggaaaa
ggctatcttctggagattaaagtaaaagagactcaccaagtggatcagattcacaatgag
ataatacgtatattcccccatgcagcgaggcaggacagattctcatccctgcttgtctat
aagattcccatggataacgtgcagtccttgtcccaagcttttctactgctggaggaagct
aaacgtgcctataacattgaggaatacagcttctcacagtctactttggaacaggtgttt
attgagttggccaaggagcaggagaaggaggactttgagctgaacaacacatttcaatgg
agacacctgagggcagaaagtatctaa
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integrated database retrieval system
