Xenopus tropicalis (tropical clawed frog): 100496983
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Entry
100496983 CDS
T01011
Symbol
phc3
Name
(RefSeq) polyhomeotic-like protein 3 isoform X2
KO
K11458
polyhomeotic-like protein 3
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
100496983 (phc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xtr03036
]
100496983 (phc3)
Chromosome and associated proteins [BR:
xtr03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
100496983 (phc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
zf-FCS_1
SAM_2
SAM_PNT
zf-FCS
Motif
Other DBs
NCBI-GeneID:
100496983
NCBI-ProteinID:
XP_002931614
Xenbase:
XB-GENE-6258800
UniProt:
A0A8J0QIH6
LinkDB
All DBs
Position
5:111969728..112020313
Genome browser
AA seq
972 aa
AA seq
DB search
MESENIITTSSATATTTTSSSANPPPISVYGSSDRHAVQVIQQALNRPTSSAAQYLQQMY
SAQQQHLMLQTAALHQQHLNSSPLQTISSVQQSNVTGERPSISSVSTTQQSNAPQTSIQL
STSPPPPQLLSRSQTSSTTSSSITQKTVLLGSTSPTLSASQAQMYLRAQMLIFTPAATVA
AVQSDIPVISSSSSSSSSCQSATQNLTIRSQPMLEMSFPNNSPPKPSNQDQPLAICHKTT
VASSKTIHTDATMENNQKNDSSMSDSRCTAVTRTSNIHQLIAPVSYSTVHSHSLGKHPAI
SILPDHPKLPQQVILQQQQQIQHRHQIQTITLHNSALEPPSTQHCVPMQSQSFVHIPSSA
HSHHCTPVTTALSPPPTISQPAQPSVVVSPPPPHSPCQSPTIIIHPQAIIQPQTSLLVQS
TLPTRDNLHHPLQTTLHSAPQMSLSTHLPPTLSSGPHQQHALVSSSPQIISPISQTQQPE
IQSIPTPTVASSPHLPTTPPSQLQALPLQSMQTIPVQPEILTPGQVLMQNALLTEEELPA
AEALVQLPFQTLPPPQTVAVNLHIQPAAVESPVVYQVENVCPEEAVVQEDCVGVITQTRT
PPTMLPSDLPESSGEGLPPDPTLRVLPSITSSVGASVIKSPSDTSHMSIPAPPLLLPAAT
TRSNRTLKPNSIPGLDKLPHAIVKPQILTHVIEGFVIQEGVEPFPVNRSSLLVEQAVKPL
SPLDEGNLNIADMKSDIQSSAKLPDNSTDTDMEDLTAEDCMDELECELLACEFCGKTGYP
NKFRQSERFCSLSCAKRYNANSTKQLGLFKANKTSRWSRKVDGSIGQRGRPSSSAGSVRE
HYLRQQLPTAYSYTSEALENSQEDSTRVTMTTRLRRQSEREREERQRRQMRKPPCQRSPD
TQTEPSLWTVEDVWAFIHALPGCHDIADEFRTQEIDGQALLLLKEDHLMGTMNIKLGPAL
KICAWINSLKVS
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggaaagtgaaaatattataacaacatcttctgcaactgcaaccactaccaccagctct
tcagccaacccccctcccatatctgtgtatggcagctcagatcgccatgctgtgcaggtc
atccagcaggcattaaatcgtcctacaagctctgcagctcagtatctacaacaaatgtat
tctgctcagcaacaacatttaatgctacagacggcagccttacatcagcagcatttaaac
agcagtcctctgcagacaatttcctctgttcaacagtctaatgtgactggagagcgacca
tctatttcatctgttagcaccacacagcaatcaaatgcacctcagacatctattcaactg
tctacttcccctccaccaccacaattactaagtcgatcgcaaacatcaagtacaactagc
agtagcatcacacaaaaaactgtattgttgggaagtacatctccaaccttaagtgcaagc
caggcccagatgtatcttagagcccagatgcttatctttacacctgctgctacagttgct
gctgtgcagtctgatattcctgttatatcatcatcctcatcttcctcctcttcctgtcaa
tctgcaactcagaatttaacaatacggagccaaccaatgcttgagatgtcctttcccaac
aacagtccaccaaaacccagcaatcaagatcagccccttgctatatgtcataaaactact
gtggcaagctcaaaaactattcatactgatgctacaatggaaaataaccagaaaaatgat
agttccatgtctgattctcgttgcactgctgtaactcgcacatcaaatatacatcagctg
attgcaccagtgtcatattctacagttcattcacactcgctgggtaaacatccagctatc
tcaatacttccagatcatccaaagttgccccaacaagtgatactacaacagcaacagcaa
atacagcacaggcatcaaatccaaaccattactttgcataattcagcattagaaccgcca
tctactcagcattgtgtaccaatgcaaagtcagagctttgtacatatccctagcagcgct
cattctcatcattgtacacctgttactactgctctgtctccaccaccaactatttctcaa
ccagctcagccatctgtagtagtgtcacctcctccacctcactctccatgtcagtctcca
actataatcattcatccacaagccatcatacagccacagacatctctgcttgtgcagtcc
actcttccaacccgagacaatttacatcatccccttcaaactacattgcattcagctcca
caaatgtctctttcaacgcatcttccacccactttgtcttcaggcccacaccaacaacat
gctttggtttcatctagtccacaaataatatctccaatatcacaaacacagcaacctgaa
atacagtccattccaacaccaacagtagcttcctctcctcatcttccaacaaccccacct
tcccagcttcaagcgctacctttacagtccatgcaaacaataccggtgcagcctgagatt
ttaacaccaggccaggttctgatgcaaaatgctctgctaacagaagaagaactgcctgct
gcagaagctctagtgcagctgccattccagactcttccaccacctcagactgttgcggta
aaccttcatatacaaccagcagcagtggagtcacctgtggtttaccaagtagagaatgtg
tgtccggaagaggcagtggtgcaggaagactgcgttggtgtaattacacagactcgcacc
cctcctacgatgttgccttctgatcttcctgaaagtagtggagaaggtcttcctccagac
cccactttgcgagtgctcccttccataacatcttcagtcggtgcctcagtaattaagtct
ccatctgacacttcacatatgtctataccagcacctccactacttttaccagctgctaca
acaagaagcaatagaactctgaagcctaacagcattccaggactagataaactaccccat
gccattgtgaaaccgcagattctgacccacgttatagagggttttgtaattcaagaagga
gtagaaccatttcctgtaaatcgttcatccctattagtggagcaggcagtcaaacctctg
tcgcctttggatgaaggaaatctgaatattgctgacatgaaatctgacattcaaagctca
gctaaacttcctgacaactccacagacacagacatggaggaccttactgcagaggactgt
atggacgagctagaatgtgaacttttggcctgtgaattttgtgggaagacagggtatccc
aacaagttccgacagtcagaaaggttctgctctttgtcatgtgcaaaaaggtacaatgca
aacagcacaaagcagcttggactcttcaaagccaataaaacaagcagatggagccgaaag
gttgacggaagtattggacagcgtggaagaccctctagctctgcagggtcagtccgagaa
cactaccttagacagcagttgccaactgcttattcgtatacaagtgaagctttagagaat
tcccaggaagattccactcgtgttactatgactacacgtttacgtcgtcagagtgaaaga
gagagggaagagaggcagcgccgccaaatgagaaaacccccctgccagcgatcacctgac
acacagacagagccatccctatggactgttgaagatgtttgggcttttatacatgcttta
ccaggctgtcatgacattgcggacgaattcaggacccaggaaattgatgggcaggctctt
ctcttactaaaggaagaccatctcatgggtaccatgaatattaagttaggaccagccctg
aagatctgtgcttggattaactccctgaaggtgtcctaa
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