Xenopus tropicalis (tropical clawed frog): 100497013
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Entry
100497013 CDS
T01011
Symbol
sbno2
Name
(RefSeq) protein strawberry notch homolog 2 isoform X2
KO
K26273
protein strawberry notch
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xtr03036
]
100497013 (sbno2)
Chromosome and associated proteins [BR:
xtr03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
100497013 (sbno2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
DEAD
Motif
Other DBs
NCBI-GeneID:
100497013
NCBI-ProteinID:
XP_002937427
Xenbase:
XB-GENE-486292
UniProt:
A0A8J0QQG8
LinkDB
All DBs
Position
1:complement(100250945..100312306)
Genome browser
AA seq
1338 aa
AA seq
DB search
MICTLSVMDRGGGYTYPELQHAANEMSPAAAMLYQPSQPDSETATPAGNLWTHNTYSPAH
CLPHASLTSPSQPFLNYPAHSNFFQDLASQRFSSSFSGLSYCDFQEPSLTNDFSNQSILS
SSPDSLSDINTQDFLTIEGLDRVPTLWDISTPPQDFSNPHLFHPNPPLPALETFEDLQAI
INTPSTQERLPPEEEEEDEDTEELGHTETYADYVPSKSKIGRQHPDRVVETSTLSSVPPP
DITYSLSLPSDVIEQGFLSALQLESIVYACQQHEVILPSGQRAGFLIGDGAGVGKGRTVS
GIILENFSKGRKKALWFSVSNDLRCDAERDLRDINAGHIAVHALNKIKYGDTSSSEGVLF
ATYSALIGESQAGGQHRTRIKQIRDWCGEKFDGVIVFDECHKAKNASSTKMGRAVLELQN
NLPMARVVYASATGASEPKNMIYMSRLGIWGEGTSFSTFDDFLHAIEKRGVGAMEIVAMD
MKVSGMYIARQLSFSGVTFRIEEIPLEESYKHMYNRAAQLWAEALVVFQTAADWLGLESR
KSLWGQFWSAHQRFFKYLCIASKVQRLVTLVKQELAKGKCVVIGLQSTGEARTREVMDEN
DGHLDCFVSAAEGVFRSLILKHFPSTKRKREKAMQKRKRRGKPRSGKMSRGDLGLIRISE
ESSSDSEGGLDSDFNSSPESFQDDDVIYIERTMNGMTLPDRVPEVDRLKMELLAKVETLG
KELPLNTLDELIDQFGGPEKVAEMTGRKGRVVRKSDRTVQFESRAEQNLSIDNVNLREKE
RFMNGEKLVAIISEASSSGISLQADKRVPNKRRRVHMTLELPWSADRAIQQFGRTHRSNQ
VSAPEYVFLISELAGEKRFASIVAKRLESLGALTHGDRRATESRDLSKYNFENKYGTRAL
EQILSAILNQTQREVPPPRDYPGSSKEFFQEIKQGLLSVGICCRETKHNAIDKECSVTKF
LNRMLGLEVHKQNSLFQFFSDTFDYLIEKDKKEGKYDMGILDLAPGVDEIYQESKETFMT
PGHPQDGQVVFYTISVDRGMSWAKALEKYQNLKDQHEGFYLSYRARGTMFSAVLAEHRHG
KYFNLYKPNIGRQSQAEALDSLLSKYHKVSPEEAMEHWEDQYNFSLHNCSHTMWNGNCKG
LQQGKKCVQGLRLRYYYMLCGSLLRVWSRMASVISDITSSSYLQIVRLKTKDKHKQVGIK
IPESCVDKVKEELKQMDLNVKRKHEESRQKAENLNHAPIYPPVPLDLSFRPPPLVDSDVL
DLTYSPPHPSIQGHWGGNSFADSLGEILSPIESLPNQHFNVKEIIEEMMQKLKAPDPPSD
RQSVIHFGGEHNSYWGTG
NT seq
4017 nt
NT seq
+upstream
nt +downstream
nt
atgatctgcacactatctgtaatggaccgggggggtggatacacatatcctgagctacag
cacgcagccaacgaaatgagcccagcagctgctatgctttaccaaccaagccagcctgac
tctgagaccgcaacgccggctggcaacctgtggacccataacacatattcacctgctcat
tgcttgccccatgcttctcttaccagcccaagtcaaccatttttgaattacccagcgcat
tcaaactttttccaagacttagcctctcagagattctcctcttccttctcaggtttaagc
tactgcgactttcaggaaccatccctgacaaatgatttctccaaccagtccatcctttca
tcttctccagattctttatctgatattaatacccaggatttcctgacaatagagggtctg
gatagggtgccaaccttatgggatatcagcacaccacctcaagatttcagtaatccccat
ctcttccatcctaaccctccccttccagctctggaaacatttgaagacttgcaagcgata
atcaatactccctctacacaagaacggcttcccccagaggaggaagaggaagatgaggat
actgaagaattagggcacacagaaacatatgctgactatgtgccatctaaatctaaaatt
ggtaggcagcatccagaccgagtggtggagaccagcaccctatctagtgttcctcctcca
gatatcacctactctttgtctctgcccagcgatgttattgaacaaggatttctctctgca
ttgcaattggaatctatagtatatgcctgccagcaacatgaagttatcctaccaagtggg
caacgggctggcttccttattggagatggagctggagtggggaagggaaggacagtctct
gggattatccttgaaaatttttcaaagggaagaaaaaaagcactgtggttcagtgtatct
aatgatctgcgctgtgatgcagagcgagatctacgggatatcaatgctggtcatatagca
gtgcatgcacttaacaagattaagtatggggacacatcctcctcagaaggggttctgttt
gccacttattcagccctgattggggagagccaggcaggaggacagcatcgcacacgtatt
aaacaaatcagagactggtgtggagagaaatttgatggagtgattgtgtttgatgaatgt
cataaagccaagaatgcttctagcaccaaaatggggcgggcggtgctggagctgcagaac
aacctacctatggcaagagtggtgtatgccagcgccactggtgcttctgagcccaagaac
atgatctacatgagccgtttgggaatttggggggagggcacatccttcagcacttttgat
gacttcttgcatgcaattgaaaagaggggtgtaggtgccatggaaattgttgccatggat
atgaaagtgagtggcatgtatattgcaaggcaacttagcttttctggagtcactttccga
attgaagaaattcccttggaggagtcatataaacatatgtataacagagcagcacagctg
tgggcagaagcattagttgttttccagactgctgcagattggttaggattagagtcacga
aaatctctctggggccagttctggtcagctcatcagcggtttttcaagtatttgtgcatt
gcgtctaaagtgcaacgccttgtgactctagtcaagcaagaacttgcaaagggcaagtgt
gtggtcattggtttgcagtcaacaggagaagctcgtacacgagaagtcatggatgaaaat
gatggtcatcttgattgctttgtttcagcggcagagggtgtcttcaggtctttgatactt
aaacatttcccatccacaaaaagaaaacgtgaaaaagccatgcaaaagagaaaacggaga
ggaaagcctcgcagtggaaagatgtcccgtggagatctgggattaatacgtatcagtgag
gaaagcagctcggattctgaaggagggttggatagtgatttcaactcttcacctgagtca
tttcaagatgatgatgtaatttatatagaacgcacaatgaatggaatgactcttcctgat
cgtgttcctgaagtggaccgtctgaagatggagcttctagcaaaagttgagacattagga
aaggaattacctcttaatactctggatgagcttatagatcagtttgggggtccagaaaag
gtggccgagatgactgggagaaagggtcgtgtggttcgtaaaagtgacagaactgttcag
tttgaatctcgagctgagcagaatctatccatagataatgtaaatctaagagaaaaggaa
cgtttcatgaacggagaaaagttggtagcaataatctcagaggcatcaagttctgggatc
tctcttcaagcagacaagcgagtccctaacaagcggcgacgtgtccacatgacacttgag
cttccatggagtgctgacagagccattcagcagtttggccgcactcatcgttccaaccag
gtgtctgctcctgagtatgtcttcctaatctcagaactagcaggagaaaagagatttgct
tctattgtagcaaaaaggctagagagtctgggagctttgactcatggggaccggcgagcc
acagaatccagagatctgagcaagtacaactttgagaacaagtatgggacaagggctctc
gagcagattttgtctgctattctaaatcagacacagagagaagtgcctcctccaagggat
tatccaggaagttctaaagaattttttcaggaaataaagcaagggcttctgtctgtgggg
atttgctgcagggaaacaaagcataatgctattgataaggaatgttcagtcaccaagttc
ctcaaccggatgcttgggcttgaagttcataagcagaacagcctcttccagtttttttct
gatacatttgattatcttattgaaaaggacaaaaaggaaggaaaatatgacatgggcata
ttggatctggcccctggagtggatgagatttaccaagagagtaaagagactttcatgaca
cctggacaccctcaggatggacaagtagtattttacacgatcagtgttgatcgggggatg
agctgggcaaaagcacttgaaaaataccagaatcttaaagaccaacacgaaggcttctac
ctgtcttacagggctcgtgggacaatgttttcagcagttttagcagaacatcgacatggg
aagtacttcaacctgtacaaacctaacattggaagacagagccaggctgaagcgttggat
agtcttctcagtaaatatcacaaggtttctccagaggaggctatggagcattgggaagac
cagtacaatttctctttacataactgcagtcacaccatgtggaatgggaattgcaaaggt
ttacaacaaggaaaaaagtgtgtgcaagggcttcgtctgcgatattattatatgctgtgt
ggctctctccttcgtgtttggagtcggatggcctcagtgatctctgatattaccagcagc
agctacctgcagatagtacgactgaaaaccaaagacaaacacaagcaagttggtattaag
attccagaaagctgtgtggacaaagtaaaggaggagctaaagcaaatggatttgaatgtt
aaaagaaaacatgaagagtctcgtcagaaagcagaaaatctcaaccatgcccctatttac
ccaccagttcctttggacctctcttttagaccaccacccttggtagattcagatgtactg
gatctaacatacagcccaccacatcctagtatacagggacattggggtggaaattcattt
gctgacagtctgggggaaattctttcacccattgaaagtctccccaaccagcacttcaat
gtaaaagagatcatagaagaaatgatgcaaaaactgaaagctccagatcctccttcggac
cgccagagtgtcattcattttgggggcgaacataatagctattggggaacaggctga
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