Xenopus tropicalis (tropical clawed frog): 100497158
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Entry
100497158 CDS
T01011
Symbol
ambra1
Name
(RefSeq) activating molecule in BECN1-regulated autophagy protein 1 isoform X3
KO
K17985
activating molecule in BECN1-regulated autophagy protein 1
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04137
Mitophagy - animal
xtr04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100497158 (ambra1)
04137 Mitophagy - animal
100497158 (ambra1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
100497158 (ambra1)
03029 Mitochondrial biogenesis [BR:
xtr03029
]
100497158 (ambra1)
Membrane trafficking [BR:
xtr04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
100497158 (ambra1)
Mitochondrial biogenesis [BR:
xtr03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
100497158 (ambra1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40
WD40_CDC20-Fz
WDR55
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_EML
EIF3I
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
eIF2A
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
100497158
NCBI-ProteinID:
XP_002934144
Xenbase:
XB-GENE-984578
UniProt:
A0A8J0QKZ5
LinkDB
All DBs
Position
4:13030520..13091875
Genome browser
AA seq
1183 aa
AA seq
DB search
MKVVPEKNAVRILAGRERGLQAQGAQRLLQCLVEDKTRFMKWEGKKVELPDSPRSTFLLA
FSPDRTLLASTHVNHNIYITEVKTGRCIHSLVGHRRTPWCVTFHPTIPGLIASGCLDGEV
RIWDLHGGSESWFTDSNNAIASLAFHPTVQLLLIATASEIHFWDWSRREPFAVVKTASEM
ERVRLVRFDPLGHYLLTAIVNPSNQQSDEESEIPLDSAEIPIYRQRSLLQTQPVRRTPLL
HNFLHMLSSRSSGTQAGEQPPVQDSATPSPPPPPPPPLPPPSNDSNQRVLYTRIRERSPG
VSTPCCQDPSMLCLCIRCSSARLSSPLFPHPEAPGAPSTSSGVTSTSFSPVQTEPSHSLE
RQQQQHQSSAQHDHGLLSRPSAFSSVHSSTAGNTLRNLSLGPTRRSLTGQPSRYQQPSTD
LAGSEWTRTVLSMGPRPEMEPMPPPRTSASSVSILSVLRQQEGETSSSVYTSATEGRGFS
SSESDSSAAPPPVHPTTTRTELQCDLRRFFLEYDRLHELEPGAPGTTQGQTHEMLNNNLE
PEQPGPSHQPPQAHSGDSTSNQPRGHINRCRACHNLLTFNNDTLRWERTPPTYPETAGTS
TWQPPPIPPPSSFQAGLAAGSTDHPGTPRVERVDLGSMAASSNRLENGTTQEERTVGVVY
NPETGHWERVYSQPASVSRAPNVSQEALPQDLQEESTEEDSLRRRLLESSLISLSRYDAT
GSREHPIYPDPARLSPAAYYAQRMIQYLSRRDSIRQRSMRYQQNRLRTSAVSSSSEAQGA
VETGDLEYEEFEDNGDRSRHRTTRNARMSAPSLGRFVPRRFLLPEYLPYAGIFHERGQPG
LATHSSVNRVLAGAVIGDGQSAVASNIANTTYRLQWWDFTKYDLPEISNASINVLVQNCK
IYNDASCDISADGQLLAAFIPSSQRGFPDEGILAVYSLAPHNLGEILFTKRFGPNAISVS
LSPMGRYVMVGLASRRILLHPSTEHMVAQVFRLQKPHGGETSMRRVFNVLYPMPADQRRH
VSINSARWLPEPGLGLAYGTNKGDLVICRPEAFDNVCDQFWEQMNEAILQHNTPRSSERP
GTSRASWRSDRDMGLINAIGLQPRNPTTSVTSQGTQTPAPQLQNAETQTEREVPESRPAP
PTAEAGPSGTAETPSSSSEGAPSSGESQEGIPSSSEERARRML
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtagtgcctgagaagaatgctgtccggatcctggctggacgggagaggggattg
caagctcagggagcccaacgtcttctccaatgcctggtggaggataagactcggtttatg
aaatgggagggcaagaaggtggagcttcccgacagcccgcgttctacattcctactggct
ttcagcccagacaggactctgctagcttccacccatgtaaatcacaacatttacatcaca
gaggttaagactgggcgctgcatccattctctcgtggggcatcggcgcactccatggtgt
gtgactttccatcccaccatcccaggactcattgcatcagggtgccttgatggcgaggtt
cgaatttgggatttacatggcgggagtgaaagctggttcacggacagtaacaatgcaatc
gcctccctggctttccaccccacagtacagctgctgcttatcgccaccgccagcgagatt
cacttctgggactggagccggcgagaaccttttgctgtggtaaaaacggccagtgaaatg
gagcgtgtacgattggtacgatttgacccccttgggcattatcttcttactgctattgta
aacccctctaaccagcagagtgatgaagagtcggagatccccctggacagtgcagagatt
cccatataccggcagcgttccctgctgcagactcagccagtgcgcaggactcctctgcta
cacaactttctgcacatgctctcctcccgatcgtcaggtacccaggcaggagagcagcca
cctgtgcaggattctgccacgccgtctcctccaccccctccacctccaccactgcctccc
ccatcaaatgacagcaaccagcgggttttgtatacccgcatccgagagcgatccccagga
gtcagtactccctgctgccaagaccccagtatgttgtgcctctgtatccgctgctccagt
gcacggctgtcttctcctctcttcccacacccagaagcaccaggggctccttctacctct
tcaggggttacttccacttctttctccccagtgcagacagaaccctcgcactccttggaa
cggcagcagcagcagcaccagtcctccgctcaacacgatcatggtcttctgagccgccct
tctgccttcagcagcgtgcacagcagcacagccggcaacacactgcgtaacctgagcctg
gggcctacccgccggtcactaacagggcagccttcccgctatcagcaaccatccactgat
ttggctggttctgaatggactcgcactgtgctgagtatgggacctcgaccggagatggaa
cccatgccgccacccaggacgagtgcctcttctgtcagcatcttgtctgttctgcgacag
caggagggagaaacgtcctcttctgtatacacctcagcaacagaggggagaggattctct
agctctgagtctgacagctctgccgctccaccacctgttcaccccacaaccactcgaact
gaacttcagtgtgacctgagacgcttcttcctcgagtatgacaggcttcatgaactggag
ccaggagcaccgggaacaacacagggacagactcacgagatgcttaacaacaacttagaa
cctgagcagcctgggccatctcatcaacccccacaagctcattcaggcgacagcacctcc
aaccagccccgtggacacattaatcgctgccgtgcgtgccacaacctgctgaccttcaac
aacgacacactgcgctgggaaaggacacccccaacttatccggagacagcaggaacctct
acttggcagcctccacccattcctcccccaagctctttccaggccggtctcgccgctggc
agcacagatcatcctggaacgcccagggtggagagagtggacctaggaagcatggcagca
agcagtaaccgtctggaaaatgggactacacaggaggagagaacagtaggcgtggtgtat
aacccagagactggacactgggaacgtgtctacagccagccagcatctgttagcagagct
ccgaatgtatcccaagaggccttaccacaagatctgcaggaggagagcacagaggaggat
tctctcagaaggaggcttttggagtcttcgctgatctctctatcccgatacgatgccacc
ggctctcgagagcatccaatctaccctgacccagccaggttgtctccagctgcctactac
gcacaaagaatgatccagtacctgtcacggagagacagcataaggcaacgctctatgagg
taccagcaaaaccgcctgcgcacctctgccgtctcatcctccagcgaggctcagggagca
gtagagactggagatttagagtacgaggagtttgaggacaatggggaccgctcccggcac
aggactacaaggaatgctcgcatgtcggcaccatccctggggcgctttgtacctaggagg
ttcctgcttccggaatacctgccttacgccggcattttccacgagcggggtcagccagga
ctggccacacactcctctgtcaacagagttctggcaggtgctgtgataggagacggccag
tctgcggtggccagtaacattgccaatacgacgtacagactgcagtggtgggacttcacc
aagtacgacctgccggaaatcagcaacgcctccatcaatgtgttggttcagaactgcaag
atatacaatgatgccagctgtgacatctccgcggatgggcaactcctcgcagcctttatc
ccaagcagccagcggggcttccctgatgaaggcatcctggccgtatattccctggcacca
cacaacttgggcgagatcctgttcaccaagcgtttcggcccgaatgctatctcagtaagt
ctgtccccgatggggcgatacgtcatggttggtttggcctcccgtaggattttgcttcat
ccctccacggagcatatggtggctcaggtcttccgccttcagaagcctcatggaggagaa
acatctatgaggcgtgtgttcaatgtgctgtacccgatgcccgctgaccagaggcgacat
gtcagtatcaactctgcccgctggctccctgagccaggccttggattggcatacggtaca
aacaagggagacctggtgatttgtcggccagaggcatttgacaatgtgtgcgatcagttc
tgggagcaaatgaatgaggccatcctgcagcataacactccccggagcagcgagaggcct
ggaaccagtcgtgcttcttggagatcagacagagacatgggtctgatcaatgccattggc
cttcagcctcgtaatcctaccacctcggtgacctcgcaaggaacccagacccctgctccc
cagctgcagaatgcagagacgcagaccgaaagggaggtgcctgagagccgccctgcaccc
ccaactgctgaggcagggcccagcggcacagcagagaccccttccagcagctccgagggg
gcgccatcttctggagagtcccaggaaggaatcccctcatcatcggaggagagggccagg
aggatgctctga
DBGET
integrated database retrieval system
