Xenopus tropicalis (tropical clawed frog): 100497252
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Entry
100497252 CDS
T01011
Symbol
plch1
Name
(RefSeq) 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-1 isoform X4
KO
K19006
phosphatidylinositol phospholipase C, eta [EC:
3.1.4.11
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr00562
Inositol phosphate metabolism
xtr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
100497252 (plch1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
100497252 (plch1)
Enzymes [BR:
xtr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.11 phosphoinositide phospholipase C
100497252 (plch1)
Membrane trafficking [BR:
xtr04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
100497252 (plch1)
Endocytosis
Macropinocytosis
Phospholipase C
100497252 (plch1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PI-PLC-X
PI-PLC-Y
EF-hand_like
C2
EF-hand_7
PH_12
EF-hand_1
EF-hand_6
EF-hand_10
EF-hand_5
EF-hand_8
PH
AIF-1
EH
Motif
Other DBs
NCBI-GeneID:
100497252
NCBI-ProteinID:
XP_012818898
Xenbase:
XB-GENE-6042445
UniProt:
A0A6I8QCS0
LinkDB
All DBs
Position
5:116554276..116670104
Genome browser
AA seq
1634 aa
AA seq
DB search
MSSQNQDKRRFLQYCRHFLADNGAFHVERCMSVMQSGTQMVKLKSGTKALVRLFYLDEHR
TCIRWRPSRKSEKAKIIIDSIYKVTEGRQSEIFHRHAEGNFDPSCCFTIYHGNHMESLDL
ITSNPEEARTWITGLKYLMAGISDEDSLAKRQRTHDQWVKQTFEEADKNGDGLLNIEEIY
QLMHKLNVNLPRRKVRQMFQEADTDENQGTLTFEEFSVFYKMMSLRRDLYLLLLNYSDKK
DHLTVDDLAQFFKVEQKMNNVTTEYCIDIIQKFEVSEENKEQHVLGIDGFTNFMRSPAGD
IFNPQHCEIYQDMDQPLCSYYIASSHNTYLTGDQLLSQSKVDMYAWVLQDGCRCIEVDCW
DGPDGEPVVHHGYTLTSKVLFKDVVETINKHAFVKNEYPVILSIENHCNIQQQRKIAQYM
KDIFGDKLDLSSVPLGESKQLPSPQNLKGKILVKGKKLPYDLADDAEEGEVSDEDSADEI
EEECKLTQCFSNGTTEHQVESFIRKKLESLLKESQIRDKEDPDSFTVKALLKATHEGLNV
NLKQNDDTKDCGKSKRSSVGSIAKHKKASKSRSKSCSTSDDEDSSPKETTAQAHRLGRRR
KTMKLCRALSDLVVYTNSVAAQDIVDDGTSGNVLSFSETRAHQVVQHKSEQLMLYNQKQL
TRIYPSAYRIDSSNFNPVAYWNAGIQLVALNYQTEGRMMELNRAKFKMNGGCGYVLKPQQ
MCKGVFNQFSADPLPASPKKQLILKIISGQQLPKPPDSMLGDRGEIIDPFVEVEIIGLPV
DCCKEQTRVVDDNGFNPVWEETLTFTVHMPEIALVRFLVWDHDPIGRDFVGQRTVAFNSL
MPGYRHVYLDGLTEASIFVHVTINEIYGKWSPLILNPSYTILHFLGATKNRQFIGLKGFF
NRSSKHSSVESNSHVRKKSIGDRILRRSASAPAKARKKTKMVFQESTESKDIVCETSGAK
ERDFMRKRTSRSLQARPVSMPVDKLLLGAFEPSTSEISKETRSDIASGSAGEMQAKHQEK
PEMTKLDLPVHKNNLAIQHSSPLFKDCHQTENPVNKPVHKKWRSLHLEKQNYDDIRELND
TFTSESDEEILKPKEGNEKEAMLLLDKMESIPENTKHHAKADLFSVTDLSSTICTDMNHL
QSTAPLLETDISHIISEVPSVNESELGSTVSALIRHFEITEDKTNLTFVSSLQGPNSQSN
FCDNSDVLISDLLNRKKHTRQSLHSASNTTVFSSPETSEYSIYTFIHEEHVPPDANYKLM
DANNGISSCSNLKNNSSNSWLDSSESLQFCSQYNANSNTLGLKSKQSRPQVSLKTSSGCT
DENVKQISSHNSFLKNLNVDSNPKRIADKNFLHTGVNRYATQACPNSQNTGIQHGSGQLY
QNRHSSYKPRADAPRDKQYIAQSGNLHSSPNANWPKPSNYHIHSLQGIKQPSPCISKSLG
DLTSDDISCNFESKYKRINRGFLSSAICPENTSLAQSRPQSTDALTEQLRKLMSFDQDDS
NRPSYYEEEEWDSPKPLTRKLSSRSQSRVRNIANRAKERQEANKIKQSNLNSSEVVLRNK
RSMASQPINRHSTGSYIGSLYNNFNSERLEGRGIPEGACTSHTQVYNDHIDTGFTYRHEP
SNTDEPEIYFLLRL
NT seq
4905 nt
NT seq
+upstream
nt +downstream
nt
atgagttcccaaaatcaggataagagaagatttctgcagtactgccgccatttcttagct
gacaatggggcatttcatgttgaaagatgtatgagtgtaatgcagtctgggacacagatg
gtaaaactaaagagtggaacaaaggctttggttcgcctcttttacctggatgaacatcgg
acatgtatcagatggagaccttcaagaaaaagcgagaaagctaaaattataattgattca
atttacaaagtcacggaagggcgacagtctgaaatattccaccgccatgcagaaggaaac
tttgatcccagttgctgttttaccatatatcatggaaaccacatggaatctctggacctc
ataacatcaaatccggaggaggcccgaacttggatcacagggctgaaatatctgatggct
ggaattagcgatgaggattctctggcaaaaaggcaaaggacccatgatcaatgggtgaag
cagacatttgaagaggctgataaaaatggggatggcttactcaacattgaggaaatatac
cagttaatgcataaactcaacgtgaatctgccacgaaggaaagttcgccagatgttccag
gaagcagacacggacgagaaccaagggactctgacctttgaagagttttctgtgttttac
aagatgatgtcattacggagggatttgtacctgttacttttaaactacagcgacaaaaag
gatcacttaacagttgacgatctggctcagtttttcaaagtagaacaaaagatgaataat
gtgacaacagaatactgtattgacattatacagaaatttgaagtctcagaggaaaacaaa
gaacaacatgttctgggaatagatggttttactaatttcatgagaagtcctgcaggagat
atttttaaccctcagcactgtgagatctaccaagacatggaccaacctctctgtagctac
tacattgcatcatcccataacacctacttaactggagaccaacttctttctcaatccaaa
gtggatatgtatgcttgggtattgcaagatggctgtcgatgcatagaagttgactgctgg
gatggaccagatggggagccagtggtacaccatggctatacccttacttccaaagtcctt
tttaaagatgttgtggaaaccatcaacaaacatgcttttgtgaaaaatgaatatcctgtt
atactttcaattgaaaaccactgcaacattcaacaacaaagaaagattgctcagtacatg
aaagatatatttggggataaacttgatctgtcttctgtcccacttggagaatccaagcaa
cttcctagtcctcagaatctcaagggaaagatattagtgaaggggaaaaagttgccatat
gacctggcagacgatgctgaggagggagaagtctcagatgaagatagtgctgacgaaata
gaagaagaatgcaaactcacacaatgttttagtaatggcacaacagagcaccaggtggaa
tctttcattcggaaaaaactggagtctttgctaaaggaatcccagatcagggataaggaa
gatccagatagctttaccgtgaaagcattactaaaggcaacacatgaaggcctgaatgtt
aatcttaaacagaatgatgacacaaaagattgtggaaagtctaaaaggtcttcagttgga
agtattgccaaacacaaaaaagcttccaaatccaggtctaaatcttgcagtactagtgat
gatgaagattcatcgccaaaagagacaacagcacaggcacacaggttgggtcgtcgaagg
aagacaatgaagttatgtcgagctttgtcagacttggttgtctacacaaattctgtggct
gcacaagacattgtagatgatgggacctcaggaaacgttttatcctttagtgaaacaaga
gcacaccaggtggttcagcacaaatctgagcagctcatgttgtacaatcaaaaacaatta
actaggatttatccatctgcatacaggatagactctagtaattttaacccagtggcctac
tggaatgcaggaattcagcttgttgcgttaaactatcaaacagaaggacgcatgatggaa
ttaaatcgagctaaattcaagatgaatggtggttgtggatatgtccttaagccccagcag
atgtgcaaaggtgtatttaaccaattttcagctgaccctcttcctgccagcccaaaaaag
cagttaattttgaagataatcagtggacagcaacttcccaaaccaccagattcaatgctt
ggggatagaggagagatcattgacccttttgtagaagtggaaattatcggcttgcctgtg
gactgctgtaaggaacagactcgagtagttgatgacaatggtttcaatcctgtatgggag
gaaactcttacctttacagttcatatgccagaaatagcattggtaaggttcttagtatgg
gaccatgatccaattggccgggattttgttggacaaaggactgtagcctttaacagtctt
atgcctggatatcggcatgtttatctggatggtctaacagaagcctccatatttgttcat
gttacaattaatgaaatatatggaaagtggagtcctttaatcctcaatcccagttacaca
atattgcactttctaggagctacgaagaacaggcagtttattggcctgaaagggtttttc
aataggagttctaagcatagctctgttgagagcaatagtcatgttcgtaagaaatcaatt
ggggaccgtatcttgcgacgcagtgcgagtgctccagccaaagccaggaagaagaccaag
atggtgtttcaagagtcaactgagagtaaagacattgtctgtgaaacatctggtgctaaa
gagagagattttatgagaaagagaacctcaaggagtctgcaagcacgccctgtttcaatg
cctgtggataagttactacttggggcttttgaaccttcaacatcagagatttctaaggag
actagaagtgacatagcttcaggttcagcaggggagatgcaagctaagcaccaggagaag
ccagagatgacaaaactggatctaccagttcataaaaataatcttgctattcaacattct
tcccctctttttaaagattgtcaccagactgaaaatccagtaaataaacctgtacataaa
aaatggaggagcttacatttagaaaaacaaaactatgatgatattagagagttaaatgat
acatttaccagtgaatctgatgaggagattttaaagccaaaagaaggtaatgaaaaagaa
gctatgctgttattagacaaaatggagtccatcccagaaaacaccaagcatcatgcaaaa
gctgatttattttctgtgactgatttatcaagcactatatgtacagacatgaatcactta
cagtctactgcacctttattagaaactgatatttctcatattataagtgaagttccttca
gtcaacgagagtgaacttggaagcacggtgtctgctttaataaggcactttgagatcacc
gaagacaaaactaatttgacatttgtctcaagtttgcaaggtccaaacagccaaagcaat
ttttgtgacaattctgatgtgttaatatctgaccttttaaatagaaaaaagcacacaaga
caatctttacattcagcttccaacactactgtgttctccagccctgaaacaagtgaatat
tctatatatacatttattcatgaagagcatgtacctcctgatgccaattacaaattgatg
gatgcaaacaatggcatatcatcgtgttctaatttaaaaaataattcatcaaacagttgg
ctagatagttctgagagcctacagttttgttctcaatataatgcaaacagcaatacatta
ggtctaaaatcaaagcaaagtaggccacaagtttcactgaaaacatcatcaggctgtaca
gatgagaatgtcaaacagatatcatctcacaactcctttctaaagaaccttaatgtagat
agtaatcctaagagaatagcggataagaatttcttacatactggtgtcaataggtatgcc
acacaagcctgtccaaactctcaaaacacaggcattcaacacggatctggtcaactttat
caaaacaggcattcaagttataaaccaagagcagatgcaccacgagacaaacagtatatt
gcccagtctggaaacctgcacagctcgcccaatgcaaactggcccaaaccttcaaactat
cacattcattcattacaaggtattaaacagccaagtccatgtatatcaaaaagtcttgga
gatctgacatcagacgatatatcttgtaattttgaaagtaagtacaaacggatcaacaga
gggtttctttcatcagctatttgtccggaaaatacatcattagctcaaagcagacctcag
tctaccgatgctttaacggaacagttgcgcaaactgatgtcttttgaccaagacgacagt
aacaggccatcatattatgaagaagaagaatgggacagtcctaagccacttacaagaaag
ctatcctcaaggagtcaaagtagggtcagaaacattgctaaccgtgccaaagaaagacag
gaggccaataaaataaaacaaagcaatttaaactcaagtgaagtagtcttaagaaacaaa
cgttccatggcttctcagcccatcaacaggcattccactggttcttatataggtagcttg
tataataactttaacagtgaaaggctagaaggcagaggtataccagaaggtgcatgcact
tcccatacacaagtgtataatgaccacattgacactggctttacttatcgacatgagcca
agcaatactgatgaaccagaaatttatttcctactaagactgtaa
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integrated database retrieval system
