Xenopus tropicalis (tropical clawed frog): 100497263
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Entry
100497263 CDS
T01011
Symbol
hmgcll1
Name
(RefSeq) 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr00280
Valine, leucine and isoleucine degradation
xtr00650
Butanoate metabolism
xtr01100
Metabolic pathways
xtr04146
Peroxisome
Module
xtr_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
100497263 (hmgcll1)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
100497263 (hmgcll1)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
100497263 (hmgcll1)
Enzymes [BR:
xtr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
100497263 (hmgcll1)
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GFIT
Motif
Pfam:
HMGL-like
DUF732
TGT
RIF5_SNase_1
Motif
Other DBs
NCBI-GeneID:
100497263
NCBI-ProteinID:
XP_017949568
Xenbase:
XB-GENE-952336
UniProt:
A0A6I8PVX1
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Position
5:96031132..96074789
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AA seq
335 aa
AA seq
DB search
MGNVPYAVKQCISYQHLLKDQFWNAETVLHEQESPPAGLPQHVKIVEVGPRDGLQNEKKF
VPTDVKIEFIDRLSDTGLPAIEVTSFVSSKWVPQMSDHTEVMQSIKKHPGVCYPVLTPNI
KGFHSAIAAGATEVSVFGAASETFNRMNINCSVEESLARFEDIIKAASNIKVPVRGYVSC
ALGCPYEGNIATSKVSEVSKRLYSMGCYEISLGDTIGVGTPGSMRKMLESVIKEVPVSAL
AVHCHDTYGQALANILTAIQMGVSVVDCAVAGLGGCPYAKGATGNVATEDVIYMLNGLGI
HTGVNLSKVMEAGHFICSALDRNTNSKVAQASFQQ
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgggtaatgttccttatgcagtaaagcaatgtatcagctaccagcatctactaaaagat
cagttttggaatgcagagactgtcctccacgagcaggaatcacctccggcaggacttcct
caacatgttaaaatagtagaagttgggccaagagacggcttacagaatgaaaagaagttt
gtgcctacagatgtaaaaattgaattcattgatcggctttctgatacaggattacctgcc
atagaagttaccagctttgtttcttcaaaatgggttccacagatgtccgatcatactgaa
gttatgcaaagtataaagaagcatccaggagtgtgctacccagttcttactccaaacatc
aaaggttttcattctgcaattgcagcaggagctactgaggtgtctgtgtttggagcagca
tcagaaacattcaacagaatgaatatcaattgttcagttgaggaaagcttggcaagattt
gaagacattatcaaagctgctagcaatatcaaagtgccagttcggggatatgtatcatgt
gcattaggctgtccatatgaagggaacattgcaacatctaaagtatcagaggtctccaaa
agattgtatagtatgggttgttatgaaatttcattaggcgacacaattggagttggaact
ccaggaagtatgaggaagatgctggaatccgtcataaaagaagttcctgtcagtgctctg
gctgttcactgccacgatacatatgggcaggcattggccaacattcttacggctatacag
atgggagttagtgttgtagactgtgcagtggctggtttaggaggatgtccctatgccaaa
ggtgcaactgggaatgttgccacagaagatgtgatttatatgctgaatggactaggtatt
catactggagtaaacctttccaaagttatggaagcgggccattttatctgctctgccttg
gataggaatacaaattcaaaggtggcacaagcgtcatttcagcagtga
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