Xenopus tropicalis (tropical clawed frog): 100497399
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Entry
100497399 CDS
T01011
Symbol
wipi2
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 2 isoform X2
KO
K17908
autophagy-related protein 18
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04136
Autophagy - other
xtr04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100497399 (wipi2)
04136 Autophagy - other
100497399 (wipi2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
100497399 (wipi2)
03029 Mitochondrial biogenesis [BR:
xtr03029
]
100497399 (wipi2)
Membrane trafficking [BR:
xtr04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
100497399 (wipi2)
Mitochondrial biogenesis [BR:
xtr03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
100497399 (wipi2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR3_1st
BCAS3_WD40
Beta-prop_EML_2
Beta-prop_WDR5
WD40_WDHD1_1st
WD40
WD40_Prp19
Beta-prop_IFT122_1st
Beta-prop_WDR3_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR90_POC16_2nd
WD40_Gbeta
DUF7165
Beta-prop_Vps41
Beta-prop_IFT140_1st
VID27
Motif
Other DBs
NCBI-GeneID:
100497399
NCBI-ProteinID:
XP_002941343
Xenbase:
XB-GENE-6084294
UniProt:
A0A6I8RXG7
LinkDB
All DBs
Position
9:42905017..43232045
Genome browser
AA seq
433 aa
AA seq
DB search
MNLASQSAEAGAVQLLFANFNQDNTSLAVGSKSGYKFFSLSSVDKLEQIYECNDTEDVCI
VERLFSSSLVAIVSLKAPRKLKVCHFKKGTEICNYSYSNTILAVKLNRQRLIVCLEESLY
IHNIRDMKVLHTIRETPPNPSGLCALSINGENCYLAYPGSASIGEVQVFDTVNLRAANMI
PAHDSPLAALAFDASGTKLATASEKGTVIRVFSIPEGQKLFEFRRGVKRCVSICSLAFSM
DSIFLSASSNTETVHIFKLETIKEKPSEEPTSWTGYFGRVIMASTSYLPSQVTEMFNQGR
AFATVRLPFCGHKNICALATIQKIPRLLVGAADGYLYIYNFDPQEGGECTLMKQHKLDGN
MEPSSEILESSSHDRPVAALTAIVTKTYPPPSPTRHAYADDLGAVGGASEDDEIRNLRLD
EDNENPPMILQTE
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgaacctagcaagtcagagtgcggaggcaggagccgtacagcttcttttcgcaaacttc
aaccaggataacacatcattggctgttggtagcaaatctggatacaagtttttctctctc
tcgtcagtggataaactcgagcagatatatgaatgcaatgacacagaggatgtctgcatt
gttgagaggctgttttcaagtagtctggttgctattgtgagcctcaaagctcctcgaaag
cttaaagtctgtcattttaagaagggtactgagatctgtaactacagctactccaacaca
attcttgctgtgaaactcaaccgtcaaagactgattgtttgtctggaggaatcactctac
attcacaatataagggatatgaaggtcttgcacactattcgcgaaacacctcccaaccct
tcagggctctgtgcgttgtcgattaatggagaaaattgctacctagcatatcctggaagt
gcatccatcggagaagtccaggtgttcgacactgttaatttgagagctgccaacatgatc
cctgcgcatgacagtcctctagcagctttagcttttgatgctagtggtactaaacttgct
accgcatcagaaaagggcacagtaattcgtgtgttttctattccagagggacagaaactt
tttgagtttcgtaggggtgtgaaaaggtgtgtgagcatttgttcgttggctttcagcatg
gacagtatcttcctttctgcctcaagtaacacagagactgtgcacattttcaagttggag
actatcaaagaaaaaccatctgaggaacctactagctggactggatattttggaagagtc
atcatggcatctacaagctatctaccttcccaagtcacagagatgtttaaccagggcaga
gcatttgcgactgtacggttgcctttctgtggacacaagaacatctgtgctttagctacg
attcaaaagatccctcgtcttctggttggagcagctgatggttatttatacatttacaac
tttgacccccaggagggaggggaatgcaccttgatgaaacaacacaagcttgatgggaac
atggaaccttcaagtgaaattcttgagtcttcttcccatgacaggccagttgcagcactt
actgctatagtaacaaaaacatatccaccaccatctccaacaagacatgcctatgctgat
gatctgggtgctgttggaggagccagtgaggacgatgaaatcagaaatcttcgactagat
gaagataatgaaaatccacctatgattctacaaacagagtga
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