Xenopus tropicalis (tropical clawed frog): 100497491
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Entry
100497491 CDS
T01011
Symbol
thsd1
Name
(RefSeq) thrombospondin type-1 domain-containing protein 1
KO
K24433
thrombospondin type-1 domain-containing protein 1
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xtr04990
]
100497491 (thsd1)
Domain-containing proteins not elsewhere classified [BR:
xtr04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
100497491 (thsd1)
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Gene cluster
GFIT
Motif
Pfam:
THSD1_D2
THSD1_D3
THSD1_N
TSP_1
TSP1_spondin
TSP1_ADAMTS
AJAP1_PANP_C
TSP1_CCN
APP1_cat
Motif
Other DBs
NCBI-GeneID:
100497491
NCBI-ProteinID:
XP_002936776
Xenbase:
XB-GENE-6044670
UniProt:
F7DBN5
LinkDB
All DBs
Position
2:150136800..150147039
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AA seq
848 aa
AA seq
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MKHTQNGLTCVLLIILYRFVFSEPGYLIVRESHHVALSREPVFVEYYLPGNNNNTTTYNI
SITLFDISNNRTVTSKDLSVNLSRGSLEFECFHFIAAGLYQFQIVFTEKNQSNIDWRSSI
LNVTWPRFHIDLNRTSNIRSFQIGVFSNEQFCLTFPDKHPRVLLEVEHTHSFQELEGLSS
DRFMLYKTYKEIPLSPSQWVEFECASVRPETFITVSLKPTFSESLIAFMGPVDLVKTFRY
KLVTSAEQRCDASVNVNVIPPPCNYADGKVIVYKEVLRGSAETSTTLAENVLQTGDKVAQ
FNCTLFDIGRNKYCFEFFIASGKIYSFLGAKECVGIRREIESWGLWQSWSPCSVTCGDGE
RERFRECLTTSSEKPACRGRAKETSLCSLEECTSISVKPSSKSTTHSKDTKTSNTVTIAG
ISLCLTIIIITIVITVWRKFHKTQKCSSTVKHNSTHSGNGRKNSDEENIYQMRESFSDMG
EGLHENVEDTVDIPLTYRQSMRVAEEKSGQENDNLQSNVQKLIPPIFSYRLAQQQLKEMK
QRGLTEATKLYHVSQNPMSDTVVDGALAPPSVTDNCDDNIANKFRLQSPFIEQRNLHPQC
HGERSTPLSPYQSTSPCQTLPHLSQFMNQDPKVRYIERPYHKNINFRRTSSFHETKHNKP
FRERSLSTLSPRQTMAYNPRTRTWQYATTDRSKHRSIRAEKSPEHFAKSANFTADPVDFS
SKNLYMWSSESKHDLISSRHAAAKASKLERLEQNRVKKGSSPIDKSWNRVQDYSPTFKDS
YERNSPFSPAQNRREKCQSFPWAADYSFYDNSSFRLTEAEQQMIDLPGYFASNEEDETST
LSMERLVI
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atgaaacacacacagaatggccttacctgcgtattgctgatcattctctacagatttgtt
tttagtgaacctggctatctcatcgtgcgagagtctcatcacgtagccttgagcagagaa
cctgtatttgtggaatattatctcccaggcaataacaataatacaacaacatataacata
tccataactttgtttgatataagcaataatcggacggtaacaagcaaagacctttctgtt
aacctatcacggggcagtttagaatttgagtgtttccattttattgccgctggactttat
cagttccagatcgtttttaccgagaagaatcagagcaacattgactggcggagcagcata
ttgaatgtcacttggccccggtttcacattgatttgaacaggacgtcaaatataaggtcg
tttcaaattggagttttctctaatgagcagttttgtctcacttttccagacaagcaccct
agggttttattggaggttgaacatacgcacagttttcaagaactggaaggactaagcagt
gacaggttcatgttgtacaaaacctacaaggaaatccctttgtctccatcccagtgggtg
gaatttgaatgtgcatcagtacgacccgaaactttcatcacggtctcccttaaacccacg
ttttcggaatcactcattgcattcatgggccctgttgacctagtgaaaacgttcaggtat
aagctagtgacctcagcagaacagaggtgcgacgcatcagtaaatgtaaatgtgatccct
cccccatgtaattacgcagatgggaaggtaattgtgtacaaggaagtgctgcggggttca
gctgaaactagcaccactctggcagagaatgttctacaaacaggagacaaggttgctcag
ttcaactgcactttatttgatattggaaggaacaagtactgttttgagttcttcattgct
tctggcaagatttactcatttcttggagccaaagaatgtgtggggataagaagagaaata
gagtcatggggtctgtggcagtcgtggagtccatgcagcgtcacatgcggagatggcgag
agagagagatttagggaatgcctgacaacctcatctgaaaagcctgcctgcaggggacgg
gcaaaggagacctcactctgctccctagaggaatgcacaagtatatctgtgaaaccttca
agcaagtcaactacacattctaaggacactaaaacaagcaatactgtgaccattgctggt
atttctctgtgcctgacgattatcatcattaccattgtaattactgtatggaggaaattt
cacaagactcagaagtgcagctcaacagtgaaacacaactctacccattcaggcaatggg
cgcaagaattcagatgaagaaaatatttaccagatgagggaaagcttctctgacatgggg
gaaggtctccatgagaatgtagaggacacagtcgatattcctttgacatacaggcaaagt
atgcgagttgcagaagagaaaagtggacaggaaaacgataacttgcaatcaaacgtgcag
aaattaatccctccaatttttagctaccgccttgctcagcagcaactaaaggagatgaaa
caaaggggtttaactgaagccaccaagttgtaccatgtttctcagaatccaatgtcagat
acagttgtagatggtgccctggctcctccatcggtcacagacaattgcgatgataacatt
gccaacaaattccggcttcagtctccatttatagagcagaggaatttgcaccctcagtgt
catggagaaagatcaactcctttatccccttatcaaagcacaagcccatgccagacatta
ccccatttatcccaatttatgaatcaagaccctaaggtcagatacattgaaaggccatat
cacaaaaatatcaactttaggagaacctccagtttccatgaaacaaagcacaacaaacct
ttcagagaaagaagtctatcgacactttccccaaggcaaacaatggcatataatccaagg
accagaacttggcagtatgcgacaactgataggtctaagcatagatctataagagctgaa
aaaagtcctgaacattttgcaaaaagtgctaattttacagctgacccagttgacttttcc
tctaaaaacctgtacatgtggtcaagtgaaagcaaacatgacttaatcagtagccgccat
gctgccgcaaaagcatcaaagctcgagagactagaacaaaaccgagttaagaaaggatcc
tccccaattgataaatcatggaatagagtgcaggattactctccaacatttaaagacagt
tatgagaggaacagtcctttcagtcctgctcaaaacagaagagaaaagtgtcaaagtttc
ccttgggcagcagactattctttctatgacaattcatcattcagactcactgaagcagag
cagcagatgattgacctgcctgggtattttgcctccaatgaagaggatgaaaccagtaca
ttaagtatggaaagactagttatttga
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