Xenopus tropicalis (tropical clawed frog): 100497532
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Entry
100497532 CDS
T01011
Symbol
capn3
Name
(RefSeq) calpain-3 isoform X1
KO
K08573
calpain-3 [EC:
3.4.22.54
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
100497532 (capn3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xtr01002
]
100497532 (capn3)
Enzymes [BR:
xtr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.54 calpain-3
100497532 (capn3)
Peptidases and inhibitors [BR:
xtr01002
]
Cysteine peptidases
Family C2: calpain family
100497532 (capn3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
Calpain_u2
EF-hand_6
EF-hand_1
EF-hand_7
EF-hand_8
EF-hand_5
CAPN13-like_C_EFh
EH
Motif
Other DBs
NCBI-GeneID:
100497532
NCBI-ProteinID:
XP_002935381
Xenbase:
XB-GENE-5875739
UniProt:
A0A6I8RC49
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All DBs
Position
8:109239539..109288140
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AA seq
805 aa
AA seq
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MPSEILPEQAQKTESGSAVTGGASDGAAPGGGIYSAIISRNLPIIGGREKTFEELRKKCL
QRNFHFQDREFPPDESSLFYSQSFPIKFEWKRPPEICENPQFILGGANRTDICQGDLGDC
WFLAAIACLTLNEKVLFRVIPPDQNFTDNYAGIFHFQFWRYGDWVDVIIDDYLPTYNNEL
VFTKSSQRNEFWSALLEKAYAKLHGSYEALKGGNTTEAMEDFTGGVTEFYELKEAPKDMY
NIMKKAFERGSLIGCSIDDKYGSSCGFAPPSNMEDAIMKMIESVGDTRPDTNGRGQPPKP
VATLVPVQLETRMANGLVKGHAYSVTGVEETKLKGKPIKLVRLRNPWGQVEWNGAWGDNA
KEWTMVDKSEKTRLQHQVQEDGEFWMSYDDFMKNFTKAEICNLTPDALDSDSLQVWTVSV
NEGRWVRGCSAGGCRNYPDTYWTNPQYRLKLLEEDDDPADNEVVCSFVVALMQKNRRKDR
KAGANLFTIGFAIYEVPKEMHGNNQHLQKDFFLYNASKAKCKSYINMREVCQRFRLPPSE
YVIIPSTYEPHQEGEFILRVFSEKRNISEEVENKIEAEKPIKKKKKPKPIIFVSDRSNSN
KELNVDGATDEDQKKMDAEKKDKTSASTDTETEEEKQFRNIFQQIAGDDMEISADELQSV
LNNVVNKHKTLKSSGFTLESCRSMIALMDTDGCGRLNLQEFYHLWQKIKQWQKIFLRFDS
DQSGTISSFEMRNAINEAGFHLNNQLYDIITMRYANKRMDLDFDSFICCFVRLEGMFRAF
HAFDKDGDGIIKLNVLEWLQLTMYA
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgccttcagaaatccttccagagcaggcacagaaaaccgaatctggctcggcagtgacc
ggtggtgctagtgatggtgctgccccaggaggaggcatttattctgccattatcagcagg
aatcttccaattattggaggacgtgagaaaacctttgaggaactcagaaaaaaatgcttg
cagaggaactttcattttcaagatcgtgagtttccaccagatgaaagctctctgttctac
agccagagtttccccatcaagtttgaatggaaaaggcctcctgaaatttgtgagaatccc
cagtttatccttggaggagcaaacagaactgacatctgccaaggagatttaggggattgc
tggttcctggctgccatagcttgtctgacactcaatgaaaaagtcctctttcgtgtcatt
cctccagaccagaatttcacagacaactatgctggaatatttcattttcagttctggcgt
tatggagactgggtcgatgtgatcatagatgactatttgccaacctataacaatgaactg
gtgttcaccaaatcttcccagcggaatgagttttggagtgctttgctggaaaaggcgtac
gcaaaactgcatggctcctatgaggctctcaagggtggaaataccacagaagctatggag
gacttcactggtggagtgacagaattttatgagcttaaagaagcaccaaaggacatgtac
aacataatgaagaaagcttttgagagaggctctctcattggatgttcaattgatgataaa
tatgggtcttcctgtggatttgcacctcctagtaatatggaggatgcaataatgaaaatg
atagagagtgtgggtgacacacgtcctgacacaaatggcagaggccagccaccaaagcca
gtagcgacccttgtccctgttcagctggagacccgcatggccaatggactggttaaaggc
cacgcatactctgttacaggtgttgaagagacaaagttgaaaggaaagccaatcaaactt
gttcgtctcaggaacccttggggacaagtggaatggaatggagcatggggtgacaatgca
aaggaatggactatggttgataagtcggaaaagactcgcctccagcaccaggtacaggaa
gatggcgagttttggatgtcttatgatgattttatgaagaatttcaccaaggctgaaatc
tgcaatctgacaccagatgcactggattcggactcactccaagtatggacagtgtctgta
aatgaagggagatgggtcaggggttgctcagcaggaggctgtcgcaattatccagacacc
tactggaccaaccctcagtatcgtcttaagctgctggaggaggatgatgaccctgctgac
aatgaggttgtctgtagttttgttgttgctttaatgcagaagaatcgaaggaaagatcga
aaggcaggagccaatcttttcaccattggttttgcaatatatgaggttccaaaagagatg
catggcaacaatcagcacctgcaaaaggatttcttcctctacaatgcctccaaagccaag
tgcaaatcatatatcaacatgagagaagtctgtcagcgtttccgattgcccccaagtgaa
tacgtcattatcccgtctacctatgagccccaccaggaaggagagttcattctgagagtt
ttctctgagaaaagaaacatttcagaagaagttgaaaacaagatagaagcagaaaaacca
attaaaaagaaaaagaaacccaagcctatcatctttgtatcggacagatcaaacagcaat
aaggagctgaatgtggatggcgccactgatgaagatcagaaaaaaatggacgcagagaaa
aaagataagacctctgctagtacagacacagagactgaggaagaaaaacagttcaggaat
atcttccaacaaattgcaggagatgacatggaaataagtgctgatgagcttcaaagtgtc
ctgaacaatgtagttaacaaacataaaactctgaaatccagtggattcaccctagaatca
tgccgcagtatgattgcgcttatggatactgatggctgcgggagactcaacctgcaagaa
ttctatcacctttggcaaaagatcaagcagtggcagaaaatctttttgcgttttgattct
gaccagtcggggaccatcagtagctttgagatgcgcaatgccatcaatgaagctggtttc
catctgaacaatcagctgtatgacattatcacaatgcgctatgccaataagagaatggac
cttgactttgacagtttcatctgctgctttgtgcgcctggaaggaatgttcagggcattc
catgcatttgacaaagatggagatggtatcattaagctgaatgtgctggagtggctgcag
cttaccatgtatgcttag
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