Xenopus tropicalis (tropical clawed frog): 100497648
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Entry
100497648 CDS
T01011
Symbol
rrn3
Name
(RefSeq) RNA polymerase I-specific transcription initiation factor RRN3
KO
K15216
RNA polymerase I-specific transcription initiation factor RRN3
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xtr03021
]
100497648 (rrn3)
Transcription machinery [BR:
xtr03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
100497648 (rrn3)
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Gene cluster
GFIT
Motif
Pfam:
RRN3
Motif
Other DBs
NCBI-GeneID:
100497648
NCBI-ProteinID:
XP_002937728
Xenbase:
XB-GENE-990491
UniProt:
A0A6I8QER1
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Position
9:complement(34332377..34350903)
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AA seq
613 aa
AA seq
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MLTESDEFLSSPPKKTVRFGGKVTEILFKYSKGDVGDFELLKHQLSDPEIKDVQLLNWLH
EFRSCITYLTKDYEQLVSIVLKLPWLNRSKEVVEEYLSFLGNLVSAQTVYLRSCLSMIIS
HFVPARVIIRDGDVDISDSDDEDEDIISTFNTCHRALQIIAKYVPSAPRFLMPILVEKFP
YTNKSARTLECYVHNLLRISIYFPTLRLEILELVVEKLLKMDVSASRQNIEEAEESAYQG
GGEQNKEEGLFNMDEDLQEMTTTSVVNETMAHPVAERLDILILTLCSYIKDVCLTNGALD
LNKTKDMYRDLLAVFDKLILPTHASCHVQYFMFYICSFRLGIAEAFVEHLWKKLQNPNNP
PVIRQAAANYIGSFLARAKFIPLVTVKACLDLLVNWLHGYIDNQDAGSRAYCDVTVHGPF
YAACQAVFYSFIFRHNQFLEGNMRKGLAYLQNLNLERIVMCQLNPLKICLPSVVNFFAAI
TRKYQLVFCYTIIERNNRQMIPIIRSSTGGDSVQVSFNPLDSFFPFDPCILKRCKKLMDP
FYQVWEESNTEDLKGGQKHIKSSTADDEDDFLKGQTPQNDSSVEMTPGSFDSHLKSPASS
MGSPTASFLRRPF
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgttgacagaaagtgatgaatttctcagctctccacccaaaaaaactgtcagatttggt
ggaaaagtgacagaaatcttgttcaagtattcaaagggtgatgtcggagactttgagctt
ttgaaacatcagttatcagatccagaaattaaggatgtgcagctactaaactggttgcat
gaattccgctcttgcattacgtacctgactaaagattatgagcagcttgtcagcattgtc
ttgaaactaccatggctgaacagaagcaaagaagttgtagaggaatatttgtcttttttg
ggaaaccttgtttcagctcagactgtttatctgagatcttgcctgagcatgattatctca
cactttgtgcctgctcgcgttatcataagagatggtgatgtggatatttcggattctgat
gatgaagatgaagatattatttcaacattcaacacgtgtcatagagcactccagataatt
gctaaatatgttccttcagcacctcgttttcttatgccaatacttgtggaaaagtttcct
tacaccaacaaatctgcaagaacattggaatgttatgtgcacaaccttctgcgaatttct
atctatttcccgacactgaggcttgagattctggagcttgtggttgaaaagcttttgaag
atggatgttagtgcttctcgtcagaatatagaggaggctgaagaatctgcttaccaaggt
ggtggagaacaaaacaaagaagaggggcttttcaatatggatgaagatctgcaagaaatg
accacaacttctgttgttaatgagactatggcacatccagttgctgaacgcttggatata
ttgatattgaccctctgttcttacattaaagatgtctgcttaaccaatggtgccctggac
ttgaataaaacaaaagacatgtatagagatttgttggctgtatttgataagttgattcta
ccaacacatgcttcttgccacgtgcagtatttcatgttttatatttgcagcttcagattg
ggcattgcagaagcattcgtggaacatctttggaagaaactgcagaatccaaataatcct
ccagttatccgacaggcagctgcaaactatattggaagttttctggctcgtgccaagttt
attccattggtgacagtgaaagcttgccttgatctactggtaaactggttgcatggttat
attgataaccaggatgctggaagtagagcctactgtgatgtaactgtccatggtcccttc
tatgcggcatgtcaggcagtgttttactcctttatatttcgccataaccagtttttggaa
gggaacatgcggaaaggtctggcctacctacagaatcttaatttggaaagaatagtcatg
tgccaattgaatcctttaaaaatctgccttccatctgtggttaacttctttgcagccatt
acaaggaaataccagttggtgttttgctacactatcatagagcgcaacaatcggcagatg
atccccattataagaagcagcactggtggtgactctgtgcaagtcagctttaacccactt
gacagtttttttccctttgacccctgcattctcaaaaggtgtaaaaagcttatggatcca
ttttatcaagtatgggaagagtctaacactgaagatttgaaaggagggcaaaagcatata
aagagttccactgcagatgatgaagatgattttctcaaaggacaaactcctcagaatgac
agttcagttgaaatgactccagggtcttttgattctcatctgaaaagccctgctagcagc
atggggtccccaactgcttcatttctacgacgtcccttctga
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