Xenopus tropicalis (tropical clawed frog): 100497712
Help
Entry
100497712 CDS
T01011
Symbol
chrne
Name
(RefSeq) acetylcholine receptor subunit epsilon
KO
K04817
nicotinic acetylcholine receptor epsilon
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
100497712 (chrne)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xtr04040
]
100497712 (chrne)
Ion channels [BR:
xtr04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
100497712 (chrne)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
100497712
NCBI-ProteinID:
XP_002941867
Xenbase:
XB-GENE-979686
UniProt:
A0A8J0QTF3
LinkDB
All DBs
Position
3:complement(147415838..147433627)
Genome browser
AA seq
505 aa
AA seq
DB search
MEPGVCFLSLLILLHNSLANESEESRLIKYLFTNYDSKARPSKGIDDVVPVSLKLTLTNL
IDLNEKEETLTTNVWVQIAWQDDRLTWNETEYGGMPLVQVPHDMMWLPEIVLENNIDGNF
EVAYYANVLVHSTGYIYWLPPAIFRSTCSIEITYFPFDWQNCSLVFRSKTYSANDIDLHL
VADDETGLPFDQVDIDREAFTENGEWAIMHRPARKIVNPKYSKEDLRYQEIVFILIIQRK
PLFYIINIIVPCVLISSLVVLVYFLPAKAGGQKCTVSISVLLAQTVFLFLIAQMIPETSL
SVPLIGKYLMFVMFVSTLIVLSCVIVLNVSLRSPSTHTLSSKVKHMLLEVLPQFIHLRVE
PCDEGEETPRERRRSSLGIMLKAEEYVLKKPRSELMFERQRERHGMRREPDGYRADGFDV
GVTTTLYRNLAQCAPEIKDCVDACNFITQNTKDDNATGAEMENWVLIGKVLDVLCFWVAL
PLFVLGTLAIFLMGHFNAVPEHPFK
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atggagccgggcgtctgctttctgtctctactaatcctgctgcacaattccttggccaat
gagagcgaggagagccggctgataaagtacctgtttaccaactacgactccaaagctcgt
ccttccaaaggcatcgatgatgttgtccccgtgtctctgaagctcacactaaccaacctc
attgacttgaatgagaaagaagaaaccctaacgaccaatgtgtgggtgcagatagcatgg
caagatgaccgtctaacctggaatgagacagaatacggaggcatgcctcttgtacaagtt
ccgcacgatatgatgtggcttcccgaaattgtcctcgaaaataacattgatgggaacttc
gaggtggcttactatgccaatgtgttggtgcacagcaccggatatatctattggcttccg
cctgccatattcaggagcacctgcagcatcgagatcacttactttccgttcgactggcaa
aactgctcgctggtgttcagatcgaagacttatagtgctaatgacatagatctccatcta
gttgccgatgacgagactggattaccttttgaccaggtggacatcgatcgtgaagccttc
acagagaatggtgagtgggcaataatgcatcgtcctgccagaaagattgtgaaccccaag
tactctaaagaagacctgaggtaccaggagattgtcttcatcctcatcatccagaggaag
cctctattctatatcatcaacatcatcgttccatgtgtcctcatttcatcgttggtagtg
ctggtttacttcctaccggccaaagctggtgggcagaagtgtacggtgtccatctccgtc
ctcctggcacagaccgtcttcctcttccttattgcccagatgatccccgagacgtcgctc
agcgtgccgctcatcggcaagtacctgatgtttgtcatgtttgtgtcgacactaattgtc
ctgagttgtgtcatcgtccttaatgtgtctctccggtcaccgagtactcacaccctgagc
tccaaagtcaagcatatgcttctggaggtgctgccccagttcatccatttgcgggtggag
ccctgtgatgagggagaggagaccccgcgggagcgcaggaggagctcgctgggaatcatg
ctgaaggcggaggagtacgtgctgaagaagcccaggagtgagctgatgtttgagaggcag
agggaacggcacgggatgaggagggaacccgacgggtacagggctgatggatttgatgtt
ggggtgaccaccactctataccggaacctggcacagtgcgccccagaaatcaaggactgt
gtggatgcctgtaacttcattacccagaataccaaggatgataatgcgactggcgctgag
atggagaactgggttctgatcgggaaggttctagacgtgctgtgcttctgggtggcgctg
ccgctgttcgtgctcgggacactcgccatcttcctcatgggtcactttaacgctgtccca
gaacatccctttaaatga
DBGET
integrated database retrieval system
