Xenopus tropicalis (tropical clawed frog): 100497817
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Entry
100497817 CDS
T01011
Symbol
gtf3c2
Name
(RefSeq) general transcription factor 3C polypeptide 2
KO
K15200
general transcription factor 3C polypeptide 2
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xtr03021
]
100497817 (gtf3c2)
Transcription machinery [BR:
xtr03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
100497817 (gtf3c2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_THOC3
WD40
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
Beta-prop_WDR5
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_RIG_2nd
Beta-prop_WDR36-Utp21_1st
WD40_Prp19
Beta-prop_EIPR1
DSE1_N
ANAPC4_WD40
Beta-prop_VPS8
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
WDR55
Beta-prop_Aladin
Beta-prop_IFT140_1st
Beta-prop_NOL10_N
MIOS_WD40
ASA1
GLYCAM-1
Motif
Other DBs
NCBI-GeneID:
100497817
NCBI-ProteinID:
XP_031757794
Xenbase:
XB-GENE-997570
UniProt:
F6X5H4
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All DBs
Position
5:161805021..161828583
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AA seq
931 aa
AA seq
DB search
MDPPASGTTETAAEGTMVLRVEESDGQAHAVPVAPGARSPGKQEPVNYLGHTPVKCCMVG
STGNTGAPPGDCRNNLSLSDSPVCVREEPSTQASLGCSAQAKRLNDPLSSPALPASVPEP
MSPTLPCLHENGPPTGSQLTPLVKVPKKRGRKSKAELLLIRQAQALDAEALARQSLALRQ
ESDNQDMETTPSGRPRRRAAKTALMYLHDLADELSSSGLSSPTKPSAVSDGSSDERGKSR
RRKRKAEGSEEDSDYVVSEDVLKEAEFEEEDNESLSGAYEPELSTFRRKAFSTPGERSGP
QIRGFADNGFHNSIMVPVWKASHVTAEYRDTCYSDWEFPDWIPSTENWHFLTHREAEPYL
PAQRLSPPFTIRREGIKEEAKPCTLGRFQSLPPHPQRWDMNFFVGGPVWSLEWCPTLGGS
GSCQYLALYCHWGMDDRHKVDGVHPGPALLQLWSLGPLDMENSCDSGPVFSYGIAVDHGC
IWDMKFCPSGGWELPCTSRKSLQMARLGLLAAAFSSGHIEIYSLPHPESLYSHRKSQVKA
QDLWEHTVCKVDCVVRLQVGSIKACTPGESGQCFTLAWHPAKPHQYLAAGFYDGTVSIWD
LKTKSVLQRVRQGRVIKQYPFLSFLSHDHAVRSVEWCKADGNFLVTSGNDRRLKFWDLRR
LPEPINNMKRFQSTELSWLLPYSGVAVAQDNCYASHGLCGIHYVDSGFLGYKPYFVTPRK
GTVWSVSGSDWLSSIAAGDVTGEVIVIVLPNLNVTSVNTKRPADRRFPVYKADFLPHVSP
ESTQPGTELPAGPLAESSEWGHLKPKSFRAAAGRFGLLFQDMDMRDFKRLLSREPVKRMH
ANENKGDLNMERVQIEAVHKVRFSPNLDTHAWVASGGHSGLVRIHCIQGLMTSVGQKLIQ
EKSSQFRAMFQSEPIRECDFNPEVQHCVVQV
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atggacccccctgcgtcgggtactacagagacagcagctgaaggcaccatggttctgcgg
gtagaagagtctgatgggcaggcccatgccgtaccagtggccccgggtgccaggagccca
ggcaagcaggagccagtgaattatctgggccacaccccagtaaagtgctgtatggtgggc
tctacagggaatacaggggccccacctggagactgccgcaacaacctgtccctctctgat
tcgccagtttgtgtgagggaggagccaagcacgcaggcctctcttggttgctccgcacag
gccaaacgcctcaatgaccccctttcatcccctgctttgcccgcctctgtgcccgaacca
atgtccccaacgctgccctgcctacatgagaacggacctcccacgggcagccagctcacc
cccctggtgaaggtacccaagaagagagggcgcaaatccaaggctgagcttctgctgatt
agacaggcgcaagcactggacgctgaggcccttgcaaggcagtctctggcattaaggcag
gaaagtgacaaccaggacatggagaccacccccagcgggcgcccccgaaggcgtgcagca
aaaacagccttgatgtacctgcatgatctggcagatgagctctcctcgtcaggcctgtct
tctcccaccaaaccctcggctgtgtcggacgggagctcagatgaacgggggaagagcagg
cgccgaaaaaggaaagccgaggggtccgaagaggattcagattatgtggtatcggaggat
gttcttaaagaagcggagttcgaggaagaggataatgagagtctgagtggggcctatgag
cctgagctgtctactttccgaaggaaagctttctctacgcctggggagaggagtggcccc
cagatacgaggattcgccgacaatggattccacaattccatcatggttcctgtctggaaa
gcctctcatgttacagcagaatacagggacacgtgctactcagactgggagtttcctgac
tggatcccaagcacagagaactggcacttccttactcacagggaagcagaaccgtacctc
ccagcgcagcgcctctccccacccttcaccatccggagggaaggaataaaggaggaggcc
aagccctgcaccctcggcaggttccaatctctcccgccccaccctcagcgctgggacatg
aatttctttgtggggggtcctgtgtggtcgttggaatggtgtccgacactgggtgggtct
ggatcctgccaatacctggcgctgtactgccactggggtatggatgatcggcacaaagtg
gacggtgtacatccggggccggccctgctgcagctctggagcttggggccactggatatg
gaaaacagctgcgactctgggcctgtgttctcttatggcatagctgtggaccatggctgc
atctgggatatgaaattctgccccagtggaggttgggagttgccctgtacctcccggaag
agtttacagatggcacgcttgggacttctggctgctgccttctccagtggccacatagag
atttacagtctccctcacccagagtccttgtactcgcaccggaagtcccaggtaaaagct
caggatctgtgggagcacacggtgtgcaaggtagactgtgtggtgcggctgcaggtgggc
tccatcaaggcctgtaccccaggagagagcgggcagtgcttcaccttggcctggcaccca
gccaaacctcaccagtacctggccgcgggattctatgatggcaccgtctccatctgggac
ctgaagaccaagtcggtgctgcagagagtgcgccaaggccgggtcatcaagcagtaccct
ttcctcagcttcctgtcacatgatcatgctgtgcgcagcgtcgagtggtgcaaagccgac
ggtaatttcctggtgaccagcgggaacgaccggcggctgaagttctgggacctgcggcgc
ctgcctgagccaatcaataacatgaagcggttccagagcacggagctcagctggctgctg
ccctactccggggtggcggtggcgcaggacaattgctacgcctcgcacggactctgtggg
atccactacgtggactcgggtttcctggggtacaagccctactttgtgacgccacggaaa
ggaaccgtttggagtgtctcaggttctgattggctgagctctattgctgctggggatgtt
actggcgaagtgattgtcattgtgctgcccaacctgaacgtgacgtccgtcaacaccaag
cggccggccgacaggagatttcctgtctataaagcagatttcctgccccatgtgtcccca
gaatccacacagcctggcacagagctgcccgccgggcccctggcagagagcagcgaatgg
gggcatctcaagccaaagtcattccgtgccgctgccggcaggtttggccttctgttccag
gacatggatatgagggactttaagcgcctgctgagccgggagccagtgaagaggatgcac
gccaatgagaataagggggatctgaacatggagcgcgtgcagatagaggcggtgcacaag
gtgcgtttcagcccaaacctggacacacacgcctgggtggcatctgggggccactctggg
ctggtgcggatccactgtatccagggcctcatgacttccgtggggcagaagctgatccag
gagaagagctcccagttccgagcaatgttccagagtgagccaatcagggagtgcgatttc
aacccagaggtgcagcactgtgtggtgcaggtgtag
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