Xenopus tropicalis (tropical clawed frog): 100497992
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Entry
100497992 CDS
T01011
Symbol
itga6
Name
(RefSeq) integrin alpha-6 isoform X1
KO
K06485
integrin alpha 6
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04382
Cornified envelope formation
xtr04510
Focal adhesion
xtr04512
ECM-receptor interaction
xtr04514
Cell adhesion molecules
xtr04810
Regulation of actin cytoskeleton
xtr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100497992 (itga6)
04514 Cell adhesion molecules
100497992 (itga6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100497992 (itga6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
100497992 (itga6)
04810 Regulation of actin cytoskeleton
100497992 (itga6)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
100497992 (itga6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xtr04147
]
100497992 (itga6)
04515 Cell adhesion molecules [BR:
xtr04515
]
100497992 (itga6)
04090 CD molecules [BR:
xtr04090
]
100497992 (itga6)
Exosome [BR:
xtr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
100497992 (itga6)
Exosomal proteins of breast milk
100497992 (itga6)
Cell adhesion molecules [BR:
xtr04515
]
Integrins
Integrin alpha subunits
100497992 (itga6)
CD molecules [BR:
xtr04090
]
Proteins
100497992 (itga6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
CarG-like
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
100497992
NCBI-ProteinID:
XP_002934665
Xenbase:
XB-GENE-489982
UniProt:
A0A6I8PZ36
LinkDB
All DBs
Position
9:complement(67266762..67320766)
Genome browser
AA seq
1095 aa
AA seq
DB search
MRLAAARINLLLGCCCAFIAAFNLDTENVISKSGDPGSLFGFSMAMHWQLDPVNRRLLLV
GSPRAKALPAQKANVTGGLYVCDITSPSPSCNRVLFDDSVDLTSESKENQWMGVSVQSQG
PGGKIVTCAHRYERRTSVNTNYENRDITGRCYVFSQDLTMTDEMDGGDWNFCEGRRRGHE
QFGSCQQGVAATFTKDFHYIVFGAPGTYNWKGVVRAEQKNNTLEDLFIFEDGPYETGGEN
KRDSDLVPAPDNSYLGFSLDTGRGITSKEEMTFVSGAPRANHSGAVVLLQKFPPNERMLS
AVHTFQGEGLASSFGYDVAVVDLNRDGWKDIVVGAPQYFDKNDREIGGAIYVYINQQGNW
NDVMPVRIVGTKDSMFGISVKNIGDINQDGYPDIAVGAPYDDGFGKVYVYHGSKDGIISE
PAQVIEGRSTNTRFFGYSIAGDMDLDQNSYPDIAVGSLSDSVKVFRSRPVITIKKTIKVT
PDRIDFNKKNCDAPSGICLEVEGCFEYTANPKTYNPVLTLSCTFELENDRRLLQKPLRMN
FKDLPQESKLPKTIELRGQNQRRCVTTTLQLLESIRDKLHPIAVSVSAEIKSVRRRKRQS
SPLPELMPILNSNEPKNATANVQFLKEGCGEDNICNSNMQLKYKFLTREGSHDSFTELKQ
ENGIPVLALKNQKEIALEVTVTNKPSNPANPKLDGDDAHEAQLTAELPSSLSYSKYVELN
PQLDKPLICASNPNGSVVFCELGNPFKRNANVTFYLILSTNEISVDTNELDIGLNLKTTS
SQANLAPVAAKARVVVELLLSVSGVAKPSQVYFGGNVLGESAMKSEDDIGNLIDFDFRVT
NFGRPLKALGTTFLNIQWPKEIYNGKWLLYLVKMESEGLDKMECQPAGEINKLKLLESGK
TRHRREIGESQSGTSDKSFSLFSERKYMTLDCNNQAKCVTIKCPLHGMDSNAIIKARSRL
WNSTFLEEYSKMNYLDILVKVFISVDTAAQNIKLANEGYQVRVTVFPEKTVAQYSGVPWW
IIFVAILAGILMLALLVFLLWKCGFFKRSRYDDSVPRYHAVRISKEEREYKDGKLPKNSE
KKQWVTKWNENESYS
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atgcgactcgcagcggctcggattaacctgctgctcggctgctgctgcgccttcatcgct
gcttttaacttggatactgagaatgtcatctccaaaagcggggatcccgggagcttgttc
ggattctccatggccatgcactggcagctggacccagtcaacaggaggctgctgttggtt
gggtcacctagagctaaagctcttccagcacagaaagcgaatgtaacaggcggcttatat
gtttgtgacatcacatcgccttcaccgagctgcaaccgggttttgtttgatgactcagtt
gatttgacatcagaaagcaaagaaaatcagtggatgggtgtgagtgttcagagccagggg
cctggtgggaagattgtgacttgtgcacatcgctacgaaaggagaacgagtgtaaataca
aactatgaaaaccgggatatcactggaagatgttatgtgttcagccaagatctcaccatg
acagatgaaatggatggcggagactggaatttctgcgaaggacgaaggagggggcacgaa
cagtttggttcttgccaacaaggtgttgctgctacattcacaaaagattttcattatatc
gtatttggtgcacctggaacatacaactggaaaggagtggtccgggcagaacaaaaaaat
aacactttagaagacttgtttatttttgaagatggaccttatgaaactggtggtgaaaac
aaacgagattcagatttagttcctgcaccagataacagttacttaggattttctttggat
accgggcgagggataacgtccaaggaagaaatgacttttgtttctggagccccgcgagcc
aatcacagtggggctgtagtcctgctgcaaaagtttccacccaatgagaggatgttgtct
gctgtacatacatttcaaggagaagggctggcgtcttcctttggttatgatgtagcggtg
gtcgatcttaatagagatgggtggaaggatattgttgttggtgctccccaatattttgat
aaaaatgacagagaaataggaggcgccatttatgtctatataaatcaacagggaaattgg
aatgatgttatgcctgtccgcattgtaggaaccaaagactctatgtttggtatatctgta
aagaacattggagacataaatcaagatggctaccctgatattgcagttggagccccgtat
gatgacggatttggcaaagtttatgtgtaccatgggtccaaagatggaatcatctcagaa
cctgctcaggttattgaaggcagaagcacaaatacgcggttctttggttactccatcgca
ggagatatggatttagatcaaaattcttacccagacattgcagtaggatccttatcagat
agtgttaaagtgttcagatcccgtcctgttatcactatcaagaagactattaaagtaaca
cctgatagaatagacttcaacaagaaaaactgtgatgccccgagtggaatatgtttggaa
gtggaaggttgttttgaatacactgcaaatcctaaaacctacaatccagttctaactctg
agctgcacgtttgaacttgaaaatgatcggaggctgttgcagaagccattaaggatgaac
tttaaagatcttccccaggaaagcaaattgccaaaaaccattgagcttagaggccagaat
caaaggagatgtgtcacgacaacacttcagctattggaaagtattagagacaagctacac
cccattgccgtgtctgttagtgcagagataaaaagtgttcgtcgaaggaagagacaaagt
agtccccttccagaacttatgccaatcctaaattctaatgagcccaagaatgctaccgct
aatgtccagtttctaaaggaaggatgcggggaggataatatctgcaacagcaatatgcaa
ctaaagtacaagtttttaaccagagaaggaagccacgattcattcacagaattgaaacaa
gagaatggtattccggtactagcattgaaaaaccaaaaggaaattgctttggaggtcacc
gtcaccaacaagccatccaatccggcaaatccaaaactggatggcgatgacgcacatgaa
gcacagcttactgcggaactgccaagctctttgtcctattctaaatatgtagagctgaat
cctcagttggataaacctttaatttgtgcatcaaaccccaatggctctgttgtgttctgt
gaacttggaaacccctttaaaaggaatgccaatgtaactttctatctgatcttgagcaca
aatgagatatcagttgatactaatgagctggatattggccttaatttgaaaacaacaagt
tcccaagccaaccttgcccctgtggctgcaaaggctcgagtggtagtagagctgctgctt
tctgtctctggagttgccaaaccttcccaggtgtactttgggggcaatgtccttggcgag
agtgccatgaagtcagaagatgacattggaaacttaatagattttgatttcagagtaacc
aattttggaaggcctcttaaagcacttggtactaccttcctgaatattcagtggccaaaa
gaaatctacaatggcaaatggttgctttacttggtgaaaatggaatcagaagggctggat
aaaatggagtgtcagcctgctggggaaataaataaactgaaactgctggaatcgggcaaa
acgagacacaggcgtgaaattggagaaagccaaagtggaacaagtgataaatcattttct
ttgttttctgagaggaagtacatgacattggactgcaataaccaagcaaaatgtgtgacc
attaaatgccctctccatggtatggacagtaatgcaatcattaaggcaaggtcaagacta
tggaacagtaccttcctagaggaatattcaaagatgaattatcttgatatccttgtgaag
gtcttcataagcgtagacacagcagcacaaaacataaaattggcgaatgaaggttaccag
gttcgtgtaacagttttcccagagaagacagtagctcaatactctggcgtgccttggtgg
attattttcgtggctatccttgctggtatattgatgcttgcactcttggtgtttttgctg
tggaagtgtggattcttcaaacgctccaggtacgatgatagtgtcccacgataccacgct
gtacgaatttccaaagaagaacgagagtacaaagatggaaaattgcctaagaacagtgaa
aaaaagcagtgggtcacaaaatggaatgaaaatgagagctattcatag
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