Xenopus tropicalis (tropical clawed frog): 100498061
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Entry
100498061 CDS
T01011
Symbol
gdnf
Name
(RefSeq) glial cell line-derived neurotrophic factor
KO
K05452
glial cell derived neurotrophic factor
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04010
MAPK signaling pathway
xtr04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
100498061 (gdnf)
04020 Calcium signaling pathway
100498061 (gdnf)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
xtr04052
]
100498061 (gdnf)
Cytokines and neuropeptides [BR:
xtr04052
]
Cytokines
Growth factors (RTK binding)
100498061 (gdnf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TGF_beta
LEAP-2
Motif
Other DBs
NCBI-GeneID:
100498061
NCBI-ProteinID:
XP_002938232
Xenbase:
XB-GENE-483795
UniProt:
F6UI64
LinkDB
All DBs
Position
1:197529382..197553856
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AA seq
227 aa
AA seq
DB search
MKLWAILAVCILLLSSASSTPLPSSWLAGKKRSHLPDPQEGEDQVLGMDGAVPEDPTANM
AKQDQQTYTEIPDDYPDQFDDVLEFIQDTIKRLRRSSNKQPPSRRDRGRQSLAANTQISS
KKTVKDRKRKNKGCVLREIHLNVTDLGLGYETKEELKFRYCSGSCNNPETTYDQILKNLT
IKKKLVNDKVKQACCRPIAFDDDLSFLDDNLVYHTLKQHSAKKCGCI
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgaagttatgggctattctggctgtctgtattttgctgctaagctctgcatccagcacc
cccttgccttccagctggttggctggtaagaagagatctcaccttccagaccctcaagaa
ggagaggaccaagttttggggatggatggggcagttcctgaagatcccactgccaatatg
gcaaaacaggatcaacaaacttacactgagatacccgatgactatccagaccagttcgac
gacgtactggagtttattcaagacaccatcaaaagactgagaaggtcgtccaacaagcag
cctccctcccggcgagacagaggaaggcaaagcctcgcagcaaatactcagatctccagt
aaaaagactgttaaagaccgaaagcggaaaaacaaaggctgcgtcctcagggagatccat
ttgaacgtgacggacttgggtttaggctacgaaaccaaggaggagctgaaatttcggtac
tgcagtggatcctgcaacaatccagagacaacgtacgaccaaattttaaaaaacctgacg
ataaagaaaaagttggtcaatgacaaggtgaagcaggcttgttgtaggccgatcgccttc
gatgacgatctttcgttcttggatgataatctagtttatcacaccttgaaacaacattcc
gctaagaaatgtggatgtatttga
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