Xenopus tropicalis (tropical clawed frog): 100498076
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Entry
100498076 CDS
T01011
Symbol
pou5f3.1
Name
(RefSeq) POU class 5 homeobox 3, gene 1
KO
K09367
POU domain transcription factor, class 5
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
100498076 (pou5f3.1)
03021 Transcription machinery [BR:
xtr03021
]
100498076 (pou5f3.1)
Transcription factors [BR:
xtr03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
100498076 (pou5f3.1)
Transcription machinery [BR:
xtr03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
100498076 (pou5f3.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
Homeobox_KN
AcnX
Motif
Other DBs
NCBI-GeneID:
100498076
NCBI-ProteinID:
NP_001272403
Xenbase:
XB-GENE-923211
UniProt:
F6TLT1
LinkDB
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Position
8:complement(3297186..3301765)
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AA seq
445 aa
AA seq
DB search
MYNQQAYPSFAHPPALMQDGSGQYNVGTYTGMAGHSHQAQAFFPFSGVKSDYGDIGGQTP
AVGDNSAPVMGWNPLASLDPANQLGISGQGNPFKGLKREREDEEAKSESPEPKCSPPAAA
PYYTHSWNPSSFWSQVSSSGTTIASKPIPIPHQSGDKCDPAGANSIFPSDQSPDKSAESG
ISSLETSRCSSATSSSSGGTNLGTPRSLSRGASDGLSSDSEEEAPNSGEMEQFAKDLKHK
RITMGYTQADVGYALGVLFGKTFSQTTICRFESLQLSFKNMCKLKPLLRSWLHEVENNEN
LQEIISRGQIIPQVQKRKHRTSIENNVKRTLETYFMQCPKPSAQEIAQIARELNMEKDVV
RVWFCNRRQKGKRQVYPYIRENGGEPYDAGQPLIPPSPGPFPLPQVMPSQVPLGPNPAIY
LPTYHKNDMFPQAMHHGIAMGNQGN
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgtataaccaacaggcctacccttcctttgcccaccccccggccctgatgcaagatggc
agcggacagtataatgtgggcacctacactggcatggccgggcacagccaccaagctcag
gctttcttccctttctctggggtaaagtcggactatggagacattggggggcaaactcct
gcggtgggagataattctgccccagtcatgggctggaaccctctagcttctctggatcct
gccaaccagttgggcatctccggccaagggaacccgtttaagggtttaaagagggaaagg
gaagacgaagaggccaaatcggaatcccctgagcccaaatgcagccctccggccgccgca
ccctactatacccactcctggaatccctccagcttctggtcgcaagtctcctcaagtggg
accaccattgcgtccaagcccatacccatcccacaccagtccggtgataaatgtgacccc
gctggggcaaatagcatctttccgtccgaccagagccccgacaagtcggcagaaagtggc
atctccagcttggagaccagtcgctgtagcagcgccaccagtagctcttctggtgggacc
aacttggggacccctagaagcctttctcggggggctagcgacgggctgagcagtgacagt
gaggaggaagcccccaattctggggagatggagcagttcgccaaagacctgaagcacaag
cgtatcacgatggggtacactcaggcggatgttggctacgcactaggggtgctttttggc
aaaacattcagccagaccaccatctgccgcttcgagtccctccagctctcctttaagaac
atgtgcaagctcaaacctttgctgcggagttggctccatgaggtggaaaacaacgagaac
ctccaagaaattatcagcagggggcagataattccccaggtccagaagaggaagcacagg
accagcatcgagaacaacgtgaaacgcaccttggagacctacttcatgcagtgccccaag
cccagcgctcaggagatcgctcagattgcgagagagctcaacatggagaaggacgtggtg
agagtctggttctgcaaccggcggcagaagggcaagcgccaggtgtacccctatattagg
gagaatggcggggagccttatgacgccggccaacccttgatacccccctccccaggtcct
tttccgttaccccaagtgatgccctcccaggtccctctgggtcccaacccagccatctac
cttccgacctatcacaaaaacgacatgttcccccaggcaatgcatcatgggatagccatg
ggtaaccaaggcaactag
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integrated database retrieval system
