Xenopus tropicalis (tropical clawed frog): 100498148
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Entry
100498148 CDS
T01011
Symbol
aqr
Name
(RefSeq) RNA helicase aquarius
KO
K12874
intron-binding protein aquarius
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100498148 (aqr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xtr03041
]
100498148 (aqr)
Spliceosome [BR:
xtr03041
]
Complex B
Other components
Prp19-related factors
100498148 (aqr)
Complex C
100498148 (aqr)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aquarius_N_1st
Aquarius_N_2nd
AAA_11
AAA_12
Aquarius_N_3rd
AAA_19
ResIII
AAA_30
UvrD_C_2
DEAD
SLFN-g3_helicase
UvrD-helicase
AAA
Parvo_NS1
AAA_16
PhoH
AAA_22
nSTAND3
NB-ARC
Motif
Other DBs
NCBI-GeneID:
100498148
NCBI-ProteinID:
XP_002932889
Xenbase:
XB-GENE-1217636
UniProt:
A0A6I8RYN8
LinkDB
All DBs
Position
8:111654211..111691845
Genome browser
AA seq
1564 aa
AA seq
DB search
MGKGLPAHSLLANTYWAPHSKKKLPFDYKVIEDIYVKEIAASRFSIKKIMLLEFSQYLEN
YLWVNYSPEVSSKPYLMSICCMVNEKFRENVPAWETFKKKPEHFPFFFKSIMEASITVET
ENDFSLHELTVLLVFLDHCFNSLEVDLIRGQIQQLISLPMWICLQPSRLEKELKKTPKLR
KFWNLIKKADEKMDSKACAQAMQERTFLKQLIQNFLSVLQSIPTSGTVSMDRVHYCERFI
ELMIDLEALLPTRRWFNTVLDDSHLVVHCYLSNLFQREQEGHLFSQLLDMLKFYAGFEIN
DQTGNALTENEMTTIHYDRITSLQRAAFAHFPELYNFALSNVAAVDLRESLVKLFGPLNP
NTLHGVASYLCLLPALAEGEDTKYEKELLLELLVSRHERRISQIQQLNQMPLYPTEKIVW
DENIVPTEYYSGEGCLALPKLNLQFLTLHDYLLRNFNLFRLESTYEIRQDIEDVVCRMKP
WQSEYGGIVFGGWARMAQPIVAFSVVEVAKPNIGENWPTRVRADVTINLNVQKHIKEEWE
GLRKHDVCFLITLRPCLPYGTKIDRRQPIVEQTGLMYLRGCEIQGMLDDKGRVIEEGPEP
KPILRGDSRTFRVFLDPNQYQQDMTNTIQTGAEDVYETFNLIMRRKPKENNFKAVLETIR
KLMNTDCVVPDWLHDIILGYGDPGSAHYTKMPNQISTLDFNDTFLSLDHLKSCFPGYKTK
VTVADPSMQKAPFRITFPVYGGKGKKRKEGSEEETEQEETPTLTVEPHVIPNRGPYPYNQ
PKRNTIQFTSTQTEAIRAGMQPGLTMVVGPPGTGKTDVAVQIISNLYHNFPEQRTLIVTH
SNQALNQLFEKIMALDIDERHLLRLGHGEEELETEKDFSRYGRVNYVLARRLELLKEVGR
LQESLGVPGDVSYTCETAGHFFLYQVMSRWEAYLSKVKSKSNHTPDVSDVGKHFPFHSYF
SNAPQPIFKGQTYEEDIELAEGCFRHIKKIFTQLEEFRAFELLRSGLDRSKYLLVKEAKI
IAMTCTHAALKRHDLVELGFKYDNILMEEAAQILEIETFIPLLLQNPEDGFSRLKRWIMI
GDHHQLPPVIKNMAFQKYSNMEQSLFTRFVRLGVPTVDLDAQGRARASLCNLYNWRYKSL
GNLPHVQLLPEFQTANAGLLYDFQLVNVVDFNGVGESEPNPYFYQNLAEAEYAVALFMYM
RLLGYPANRISILTTYNGQKHLIRDIINQRCGNNPMIGQPSKVTTVDRFQGQQNDYIILS
LVRTKAVGHLRDVRRLVVAMSRARLGLYVFARVSLFQNCFELTPVFSQLTARPLKLHILP
GESFPTQRRNVDIPPYSAQVIKNMPEMATFVYNMYMQMMQRSQKYQYRQDLLPPPTSTQQ
TDHLSTQDEGMEVDAETFQYGNEASEQAAQEISKTEEGTTEKMADSIDTEETLKPMEVGS
AQEEKLASAMGNSEQASSEINSEAKAQKSETEATEMNQSDPGQVEVKEPETEQTHSEKQT
QNKPSEGASGTAEGVQQEAMDTGEGGDSHVIDQQEEKGTEHHKMPEHPGRDSDSEYSEDE
GAED
NT seq
4695 nt
NT seq
+upstream
nt +downstream
nt
atgggaaagggactccctgcacactcgctgctggccaatacatattgggctccccattca
aagaagaagctgccatttgattacaaggtgattgaagacatctatgtaaaggaaattgca
gcatcgaggttttccatcaaaaagataatgctcttagagttcagtcagtacctggagaac
tacttatgggtaaattactcgccagaggtgtccagtaaaccctatctgatgtccatctgt
tgcatggtgaatgagaaattcagggaaaatgtgccagcctgggagaccttcaagaagaaa
ccagaacacttccctttctttttcaagagtataatggaggcatccataactgtggagact
gaaaatgacttctctttgcatgagctcacagtcctgcttgttttcttagatcactgcttc
aacagcctggaggttgatttgattcgtggacagattcagcaactcatctccctgcccatg
tggatctgccttcagccgagccgtttggaaaaggagctgaagaaaacaccaaaacttagg
aaattctggaatctcattaagaaagcagatgagaaaatggacagtaaagcatgtgcacag
gcaatgcaggaaaggacattccttaaacaacttatccagaatttcctgtcggtactccag
tccatcccaacttctggtacagtcagcatggacagagtgcattactgtgagcgatttata
gaactcatgattgacctggaggctttgcttcccacacgccgctggtttaacactgtgcta
gatgattcacatttggttgttcattgctacctttccaacttattccagcgggaacaggag
ggacatctcttctcccagcttctggacatgctgaaattttatgctgggtttgaaataaat
gaccagacgggaaatgccctaacagagaatgagatgaccacaattcactatgatcgcatt
acttccttgcagagagcagcttttgctcactttcctgaactctacaactttgcactttca
aatgtggcagctgttgacttgcgagaatcccttgtgaaattatttggtcctctaaatcca
aacacactccacggggtggcctcgtacctttgtcttttaccagctctagctgaaggagag
gacacaaaatatgaaaaagagttactcttggaactgctggtctctcggcatgaacgtcgc
atctctcaaattcagcagctgaaccaaatgcccttgtaccccacagagaagattgtatgg
gatgagaacatcgtgcctacagagtactattccggggaagggtgccttgcactgccaaaa
ttaaacctgcagttccttaccctacatgattatctactgcgcaacttcaacctcttccgc
ttggagtcaacatatgagatccgtcaggacattgaggatgtggtttgccgcatgaagcct
tggcagtccgaatatggaggcattgtttttgggggttgggcacgtatggcccagccaatt
gtggccttctcagtagtagaagtggccaagcccaatattggcgagaactggccaactcga
gtcagggccgatgtcacaatcaacctgaatgtccaaaaacacatcaaagaagaatgggaa
ggtctccgcaagcatgatgtctgcttcctgatcaccttaaggccctgcctgccttatggt
acaaaaattgatcggcggcaacccattgtagagcagactggcctcatgtatctacggggg
tgtgagatccaaggcatgctggatgataagggacgagtcattgaggaaggtccagaaccc
aaacccatacttagaggagactccagaacattccgggtgttccttgaccccaaccagtac
cagcaggacatgactaacaccatccagactggggcagaggatgtgtatgaaacatttaac
ttgattatgaggcggaagcccaaagaaaataactttaaggctgttcttgagaccatccgg
aagctgatgaacacagactgtgtggtgcctgactggcttcatgacatcattttgggttat
ggagacccaggaagtgcccactacacaaaaatgccaaatcagatttcaacactggacttc
aatgacacctttttaagtttggaccaccttaagtcatgttttccgggctacaaaactaag
gtgacagtggctgatccatccatgcaaaaggccccttttagaattacgtttcctgtctat
ggaggcaaaggtaagaagcggaaagaaggctccgaagaagaaactgagcaggaagagacc
cccaccttgactgtagagccacatgtcataccgaacagagggccttacccatacaaccaa
ccaaaacgcaacaccatccagttcacatctacccagacggaagctatccgtgcaggcatg
cagcctggccttactatggtagtcggaccacctggcacaggaaaaacagacgtagctgtc
cagatcatttccaatctgtatcacaacttcccggagcagagaacccttattgtgacgcac
tccaatcaggctctgaaccagctgtttgagaagattatggctctggatattgacgagagg
cacctcctgcgtctgggccatggagaggaggagctggagactgagaaggatttcagcagg
tatggaagagtgaattatgtactagcaagaagactggagttacttaaggaggttggaaga
ttacaagagagtttgggggtgccaggagatgtgtcctatacctgcgagaccgctggccat
ttcttcttgtaccaggtcatgtctcgatgggaggcttacctgagcaaggtgaaatccaaa
tccaatcacactccagatgtgagtgatgttggcaaacattttcccttccattcctacttc
tccaatgctcctcagcccatctttaaaggtcaaacgtatgaggaggacatagagctggct
gaaggttgcttccgacacatcaagaagatttttactcagcttgaggagtttcgagccttc
gagttgctgcgtagcgggctagatcgctccaaataccttctggtcaaggaagccaagatc
attgccatgacctgcacacatgctgcactgaaacgccatgaccttgtggagctgggattc
aagtacgataacatcctgatggaagaagccgctcagattcttgaaattgagacgttcatc
cccctcctcctccagaatccggaggatggtttcagccgtctaaagcgctggatcatgata
ggggaccaccatcagctaccccctgtcattaagaacatggccttccaaaagtattccaat
atggagcagtcactctttaccagatttgttcgtctgggtgtgccaacagttgaccttgat
gcccagggaagagcaagagcaagcctgtgcaatttatacaactggcgttataagagcctg
ggaaatctacctcatgtccagcttcttcctgaattccaaacagccaatgccgggctttta
tatgatttccaacttgtcaacgtggtagatttcaatggcgttggagagtcagagcccaac
ccatacttttaccagaatttggctgaagctgaatatgcagtggcactgtttatgtatatg
cgcctacttggatacccagccaatcgtatcagcatcttaaccacctacaatggacagaag
catctgatccgtgacatcatcaatcagcgatgtggaaataaccccatgattggtcagccc
agtaaggttactacagtggatagatttcaaggacagcaaaacgactacatcatcctttca
ctagtcaggaccaaggcagtgggtcacctaagggatgtaagacgactggtagtggccatg
tccagagctcgcttaggcctgtacgtttttgccagagtttccctgttccagaactgtttt
gagctgacccctgtttttagccagctgacagctcgcccactaaagctgcacatcttgcct
ggagagtccttcccaacccagagaaggaacgttgacatacctccctactcagcccaagtc
attaagaatatgcccgaaatggcgacttttgtgtacaatatgtatatgcagatgatgcag
agaagtcagaagtaccagtaccgccaggatcttctccctccccctacttcaacacaacaa
acagatcatctgtccactcaggacgagggtatggaagtagatgcagagactttccaatat
gggaatgaagcatcagaacaagctgctcaggagatctcaaaaacagaagagggcaccaca
gagaagatggctgattccatagacactgaggaaacactaaaacctatggaagtagggagt
gcgcaagaggagaagctggccagtgctatgggcaactctgagcaagcatcatcagagata
aacagtgaagctaaggcccagaagtcagaaactgaagccactgaaatgaaccagtctgat
cctggacaggttgaggtgaaggagccagagactgaacaaacccattcagagaagcaaacg
caaaacaaaccctctgagggggcatccgggactgcggaaggggtgcagcaggaggcaatg
gatacaggagaagggggggattcacatgtgatcgatcagcaagaagaaaagggcacagaa
catcataagatgccagagcatcctggcagagacagtgatagtgaatacagtgaggatgaa
ggggcagaggattaa
DBGET
integrated database retrieval system
