Xenopus tropicalis (tropical clawed frog): 100498199
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Entry
100498199 CDS
T01011
Symbol
atf6
Name
(RefSeq) cyclic AMP-dependent transcription factor ATF-6 alpha
KO
K09054
cyclic AMP-dependent transcription factor ATF-6 alpha
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
100498199 (atf6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
100498199 (atf6)
Transcription factors [BR:
xtr03000
]
Eukaryotic type
Basic leucine zipper (bZIP)
CREB
100498199 (atf6)
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Gene cluster
GFIT
Motif
Pfam:
bZIP_1
bZIP_2
DUF3450
Motif
Other DBs
NCBI-GeneID:
100498199
NCBI-ProteinID:
XP_002933826
Xenbase:
XB-GENE-983814
UniProt:
A0A6I8PWN8
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Position
4:118766377..118830743
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AA seq
644 aa
AA seq
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MAAVLKSCVLGGLQGPGPGGGSPVEELDWDSSLFEELTDLVDVDNMFPDEKNDLYGNHFD
NLDFNMDLMAWNTCPWDVPGDVIKLDPLSPPSSISSVPSPSSVDSLASSSQFVPEDSDVS
SSQLSPISLYSDCSKSPKSPDFPEEKPLISARQTTGSITQRKLPPVVPKPSIQPKAIIIP
ATADIQASATVAPKTIIFQPLTTLLPKQQPLITLQQAPSAGQPVLLAPSTVVQLPASGIV
TTQQVLTVGGGTATIPTSSMNILTPTVPQCAKMSPVKPVMPTSVQSVDSGTDINVLRRQQ
RMIKNRESAFQSRRKKKEYMQTLEARLRVALSENERLKKENGSLQKLLEEVVTENQKLKV
TAPKRRAVCLMMVAAFLLLNFSPLSILESKPGSYDVEVSPIRHNRHLLGFSASDENVEAQ
KVPDNTRNDRYISNEKALMVVKEPLLYIPQPPPCQPQVNKTQTLRLNQELRGWIHRHEVE
RTKSRRMTNSHKEQKPEEKSGNSELVTMQYTDTSIRNSNELQVYYYSPRSYQDFLEAIRR
REDTFYVVSFRRDHLLLPATHRNKTTRPKMSIILPSTNVNDNVINGQDFEVMMQIDCEVM
DTRILHVKASTIPPFLREHRENQTNSFYNSPTSGPEPAQVVSAI
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atggcagcggtgctaaagagctgtgtgttgggcggactgcaggggcccggcccgggcggg
gggtcaccggtggaagaattggactgggattcttcactctttgaagaacttactgatttg
gttgatgtagataatatgtttccggatgagaaaaatgacctttacggaaaccattttgac
aaccttgatttcaacatggacctgatggcatggaatacttgtccatgggatgtccctggt
gacgttatcaaactagatcctttgtctcctccatcatccatctcctctgtgccttcccct
tcatctgttgattctttagcctcttcttctcagtttgtgccagaagattctgatgtatcc
agttctcagctgtctcccatatcattgtactctgattgctcaaaaagtcccaagtcgcca
gatttccctgaagagaaacctttaataagtgcacgccagaccacaggttctattacacag
cggaagctgcctccagtggtaccgaaaccatccattcaacccaaagctataataattcct
gctactgctgatattcaagcctccgcaactgttgcacccaaaacaataattttccagcct
ctaacaacacttctaccaaagcaacaacctcttattaccttgcagcaagcaccttctgct
ggccaaccagtcctgcttgccccttctacggtggtgcagcttcctgcttccggtattgtt
actacacagcaagtccttactgtgggtggaggtacagcaacaatccctacttcatctatg
aacatcctcacccctactgttccacaatgtgctaaaatgtcaccagttaaacccgtcatg
ccaacatctgtgcaatctgtggattctggaacagatataaatgtcttaaggaggcaacag
cgaatgattaaaaaccgggaatcggccttccagtctagaagaaagaaaaaggaatacatg
cagacactggaagcacgcctgagagtagccctctctgagaatgagaggctaaagaaggaa
aatggatccttgcagaaattgctagaagaagttgtaactgaaaatcaaaagctcaaagtg
accgcaccgaagagaagagccgtctgcctaatgatggtggctgcatttctactgctcaat
tttagcccattaagtattctggaatcaaagccaggctcctatgatgttgaggtcagccct
atccgccacaacaggcatcttcttggtttttcagctagtgatgaaaatgtagaagcccag
aaagttccagataataccagaaatgataggtacatttccaatgaaaaggcattgatggta
gtaaaggagccattactctacattcctcagcctcctccttgccaaccacaggttaataaa
acacagaccctcaggttaaatcaggaactgcgtggttggatacacaggcatgaggtcgag
aggaccaagtccagaagaatgaccaacagccataaggaacaaaagccagaggagaaaagt
ggcaattctgaacttgtgacaatgcagtatacagacaccagtatcaggaactctaacgag
cttcaggtttattactactccccaaggagctaccaagactttttagaagcaatccgcagg
agggaagataccttctatgtggtgtcattccgtagggatcatcttttgttaccagccacc
cacagaaataaaaccactagaccaaaaatgtcaataatactgccatcaactaatgtgaat
gataatgtgattaacgggcaggattttgaggtgatgatgcaaatagactgcgaagtgatg
gacacccgcattctacatgtcaaggcttcaacgattcctccatttttacgagagcaccga
gagaaccagacaaattcgttctacaactctcccacatctggcccggaacctgcccaagtt
gtgagcgcaatataa
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