Xenopus tropicalis (tropical clawed frog): 100498286
Help
Entry
100498286 CDS
T01011
Symbol
depdc5
Name
(RefSeq) GATOR complex protein DEPDC5 isoform X3
KO
K20404
SEA/GATOR complex protein SEA1/DEPDC5
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
100498286 (depdc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
100498286 (depdc5)
Membrane trafficking [BR:
xtr04131
]
Autophagy
Other autophagy associated proteins
SEACIT/GATOR1 complex
100498286 (depdc5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEPDC5_CTD
vWA_IML1
IML1_N
IML1_small
DEP
IML1_N_fung
Motif
Other DBs
NCBI-GeneID:
100498286
NCBI-ProteinID:
XP_002931964
Xenbase:
XB-GENE-980707
UniProt:
A0A8J0QHQ2
LinkDB
All DBs
Position
1:152195780..152234059
Genome browser
AA seq
1599 aa
AA seq
DB search
MLLVVISCIGCITCPDVLQISRESSMRTNRVYKLVIHKKGFGGSDDELVINPKVFPYINL
GDIVEIAHPNDEYSPLLLQVKSLKEDLQKETVSIDQTVAQVFRLRPYQDVYVNVVDPKDV
TLDLVELTFKDQYIGRGDMWRLKKSLVSSCAYITQKVEFAGIRAQVGELWVKSEKVTCGY
ISEDTRVVFRSTSAMVYIFIQMSSELWDFDIYGDLYFEKAVNGFLADLFNKWKDKNCSHE
VTVVLFSRTFYDAKNIEDFPEAHRNASVMQDHKGRFYEDFYKVVVQNERREEWTSLLVTI
KKLFIQYPVLVRLENAEGFPPGHNSTSDQGNYLEAINLSFNVFDKHYINRNFDRTGQMSV
VITPGVGVFQVDRSLMILTKQRMIDNGIGVDLVCMGEQPLHAVPLFKLHNRSSPGDSRLG
DDYNIPHWINHSFYTSQSQPLNNSFTPRIKLAPRKTNSEKGRTGKDPSIGSPKETENALP
IQVDYDAYDSQVFRLPGPSRAQRSITFRAVRETQVRKSSCSYDTSCSPVSRPFTAEEGRS
QNSDESSLGKLSNILLIPRPHLHQYEASSSLGYTSTRDFLERMIESQQRDSSAPGRFHVG
SAESMLHVRPGGYHPQRALINPFAPSRMPMKLTSNRRRWMHTFPVGPSGEAIQIHHQTRQ
NMAELQGSGMREASHSSAELLELAYHEATGRHSGPRTPGENGSCGSNEEFSCNTPINGQR
NHNTGSNHREKESSDDSVPCCPEPMPGFCCTVGVDWKSLTTPACLPLTTDYFPDRQSLQN
DYTEGCYDLLPEADLDRRDEEGAQMTAQQVFEEFICQRLMQGYQIIVQPKHPKAISSVPP
PLSSSPLYRRGLVSRNRAEEENQYWLSMGRTFHKVTLKDKIITVTRYLPKYPYESAQISY
MYSLCPSHSECDFVSSWVEFSHERLEDYKWNYLDQYICSAGSEDFSLIESLKFWRTRFLL
LPSCVGPTKRITEGEQRCDIYGERPRSEQEEAQLLDGFLRFVEGLNRIRRRHRSDRMIRK
GAGMKGLQLPSHPPEPPGPPIGKKGTSALSALLEMEANQKSLGEQQALVHAAKLSSQVSD
PAVTPTYVDSPRKDGAFFVEFVRSPRTAPSFTPQISIDQGTSLVTDGNNAMPNPTPSERI
QSQGATSVDQPPTSTECSAQQISVGPSVLPTTASLSEILEAMKHPTTGIPLLSEQKCLPP
GCFISAEAVHWLVNNISWVQSQVMAMDIMQKMLEEQYITHASGETFRTFIYGFYLYKIPA
DKEPDRASNLVQPCVWHSTAMEDFTAFQRKWFEVALVEEELLHSEIPPFLLPWLPSRPAS
YASRHSSFSRSFGGRSQAAALLAATVPEQRTVTLDVDVNNRTDRLEWCSSYYHGNFSLTA
AFEIKLHWMAATAAMLFEMVQGWHRKAPSCGFLLVPVVEGPFSLPSYLYGDPLRAQLFIP
LNISCLVKAENDHLFEGFEPETYWERMYLLQEVIAYRFGFIQDKYSASAFNFPSENKPQY
IHVTGTVFLQLPYSKRKGQQRRRRNSTSSSTQNLFGEERIGYNWAYNTMLTKTWRSIGTG
DERFADRLLKDFTDFCANRDNRLGTFWANCLEKMNTSAP
NT seq
4800 nt
NT seq
+upstream
nt +downstream
nt
atgttgttggttgttatttcctgtattggatgcatcacttgcccagatgtgcttcaaatc
agcagagaatccagcatgaggaccaacagagtatacaagctagtcatccacaagaaaggc
tttgggggcagtgatgatgagttggtgataaaccccaaggtctttccatatattaacctg
ggggacattgttgaaattgctcacccaaatgatgaatacagtccccttctcctgcaggtg
aagtcactaaaagaagatttgcaaaaagaaactgttagtattgaccaaaccgtagcccaa
gtgtttcgcctacggccataccaggatgtttatgtcaatgttgttgaccctaaggatgtg
actcttgatcttgtggagttaacatttaaggaccagtatataggtcgtggagatatgtgg
aggctaaaaaagagtttggtcagctcctgtgcttacataactcagaaagtggagtttgct
ggaattcgagcacaagttggagaattatgggttaagagcgagaaagtcacctgtgggtac
atcagtgaagacacacgagttgtattcaggtccacatcggccatggtgtatatatttata
caaatgagcagtgaactgtgggactttgatatctatggtgatctgtattttgagaaggca
gtaaatggatttctggctgatctcttcaacaaatggaaggacaagaactgcagtcacgag
gttacagtggttctattctctaggaccttttatgatgcaaagaatattgaggactttcca
gaagcacaccgtaatgcgtccgtcatgcaagatcacaagggcagattctatgaagacttc
tacaaggtggttgtacaaaatgaaaggcgagaagaatggacttcattgctagtcactatt
aagaaactttttattcagtacccagtgcttgtacgactggaaaatgcagagggctttccc
ccagggcataattctacttcagatcaaggaaattatctagaggccattaacctgtccttt
aatgtgtttgacaagcattatataaatcgcaactttgaccgaactggtcagatgtctgtt
gtgatcactccaggtgttggtgttttccaagtggatcgttcactaatgattctgaccaag
cagcgaatgattgataatgggattggtgtggatctggtatgtatgggagagcagccgctt
catgctgttccacttttcaagctgcacaatcgttccagtccaggagattcacgtcttgga
gatgattataacatccctcactggattaaccatagcttctacacatcgcagagccagcct
ctaaataacagctttaccccacgcatcaaactggcacctcgcaagacaaatagtgagaaa
ggaaggactggaaaagacccatccataggaagccccaaagagacagagaatgctcttccc
atacaagtagactacgatgcttatgactcacaggtcttccgattaccaggtccatccagg
gcacagcgaagcataactttcagggcagtgcgagagacacaagttcgaaaaagttcttgt
tcctatgacacatcctgtagcccagtcagtcggccatttacagcagaggaaggccgtagc
caaaattcagatgagagctctttgggaaaactctccaacatcctacttatcccaaggcca
catctgcatcaatatgaggccagcagctctttgggttatactagcacaagagatttcttg
gagaggatgattgaatcccaacagcgagactcaagtgctcctggcagattccatgtgggc
agtgcagaatccatgttacacgtccgacctgggggataccacccgcagagagcactcatc
aacccatttgcaccttcacgtatgccaatgaaactgacatcaaatcgcaggaggtggatg
cacacatttccagtgggcccatctggagaagcaatacaaatacatcaccaaactcgtcag
aatatggcagagctacagggtagtggcatgcgtgaggcatctcattcttctgcagagttg
ctagaattggcttaccatgaagccactggcagacacagtggccctcgcacccctggggaa
aatggctcttgtgggagcaatgaagaattctcctgcaacacacccatcaatgggcagagg
aaccacaatacagggtctaatcacagggagaaagagtcctctgatgacagcgtaccatgc
tgcccagaacccatgcctggtttctgctgcacggttggggtggattggaagtccctcacc
accccagcctgcctgccgcttaccacagactacttcccagataggcaaagtctacaaaat
gattacacagagggatgctatgaccttctgccagaagctgaccttgacagacgagatgaa
gagggagctcagatgactgcacaacaagtttttgaagagtttatctgccaacgtcttatg
caaggttatcaaattattgttcagccaaaacacccaaaagccatctcctctgttcctcct
ccactcagcagcagcccgctttacagaagagggctggtgtcaaggaacagagctgaagag
gagaaccagtactggctgagtatgggccgaaccttccataaggtgacactaaaggacaag
ataataacagtcactagatatctacccaagtatccatatgaatctgcccaaatcagctac
atgtacagtctgtgcccatcacactctgagtgtgattttgtgtccagctgggtggaattc
tcccatgagcgactggaggattataaatggaactatttggatcagtatatatgctcagct
ggctctgaagatttcagtctcatcgaatccctaaagttttggcgcacacgtttccttttg
ctcccttcttgtgtgggacccacaaaacgcatcactgagggggaacaacgctgtgatata
tatggtgaacgccctcgatcagaacaagaggaagcacagttgttagacggctttttacgc
tttgtggaggggctaaaccgaatccgtcgacgccaccgttctgatcgcatgatccggaaa
ggagcaggtatgaagggcctgcaattgccttctcatccgccagaacctccaggtccacct
atagggaagaaaggaacatcagcactatcagcattgcttgagatggaagctaatcaaaag
agcctgggggagcagcaagcccttgtacatgctgcaaaattgtcatctcaggtctcagac
cctgcggtaactcccacttatgtggacagtcctcgtaaggatggggccttctttgtggag
tttgtacgcagtccacgcacagcgccttccttcactcctcagatctccattgaccaagga
acttctttagtgactgatggaaataatgccatgcctaaccctaccccttctgaaagaata
cagagtcagggtgcaacctctgtagatcagccccccacttcaactgaatgcagtgcacag
cagatatctgtgggtccaagtgtattaccaaccactgccagtctgagtgagattctggag
gctatgaaacatccaactacaggcatccctctcctgtcagagcagaagtgccttcctcct
ggttgctttatcagtgctgaggctgtgcattggctggtcaataatattagctgggtgcaa
agtcaggttatggccatggatatcatgcagaagatgcttgaagagcagtatatcacacat
gcttcaggagagacatttagaactttcatctatggcttttacttgtacaagatcccagct
gacaaggagcctgacagagcatcaaacctggtacagccatgcgtgtggcattccacagcc
atggaggatttcacagccttccaacggaagtggtttgaggttgcattggtggaggaagag
ctactgcactccgagatcccaccttttcttttgccgtggttacctagtcgccccgcatct
tatgcaagtaggcacagctcctttagccgcagcttcggaggaaggagccaggccgctgct
ctgctagctgctacagtgccagagcagagaacggtcactttagatgtggatgttaataac
cgcactgaccggctagaatggtgcagcagctactatcacggaaacttctccttgactgct
gcttttgagatcaaactgcactggatggcagcaactgcagcaatgctatttgagatggtt
caaggatggcacagaaaagctccgtcctgcggtttcctcctagtacctgttgtagaaggc
cctttttctctccctagttacttgtatggggatcctttgcgtgctcagctttttattcca
cttaatatcagctgcttagtaaaagctgagaatgaccatctttttgaaggttttgaacca
gaaacttactgggaacgaatgtacttgctacaggaagtaatagcttatagatttggcttt
attcaggacaaatattcagcatctgcatttaacttcccatcagagaataaaccacaatat
atacatgtgacaggtactgtattcttacagctgccttactcaaagcggaaaggacagcag
agacgtaggaggaattcgaccagctcttctactcagaacctttttggagaagaacgcata
gggtataattgggcctacaataccatgctgactaaaacgtggcgctccattggtacagga
gatgagaggtttgctgaccgactgcttaaagactttactgacttctgtgccaacagagat
aacaggttaggcacattctgggcaaactgcttggagaaaatgaacacaagtgcgccttag
DBGET
integrated database retrieval system
