Xenopus tropicalis (tropical clawed frog): 100498439
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Entry
100498439 CDS
T01011
Name
(RefSeq) gastrula zinc finger protein XlCGF57.1-like
KO
K09228
KRAB domain-containing zinc finger protein
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
100498439
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
100498439
Transcription factors [BR:
xtr03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
100498439
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-C2H2_6
Zn-ribbon_8
zf-met
zf-C2HE
zf-C2H2_11
ROS_MUCR
Motif
Other DBs
NCBI-GeneID:
100498439
NCBI-ProteinID:
XP_012821259
UniProt:
A0A6I8S986
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All DBs
Position
6:3581301..3584299
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AA seq
428 aa
AA seq
DB search
MFQGEEKKSRTGRNSYPDTGTSLRKRSRTSETSKMKKIREDRSENIQANLSQTQTHKEFC
KTSSNDWPPMPPEFGADGKSPALRTQRLQDTDFRISFDCKECGESFGQQSKLEAHFLCHT
GEKPFVCVHCGKGFKNKYKLNLHLRIHTGEKLSVCPHCGKSYRDKTKLIVHLRIHTGEKP
FVCTECGKGFRDSSSLKSHLRIHTGEKPFVCTECGKGFRKNHELKSHLHIHTGVNPFVCT
ECGKCFRDKSELNIHINVHTGKTFPCTECGKSFAAKKNLKRHQMVHTGEKPHECTECGKR
FMEKSKLNIHYRSHSGVKPFSCCECGEQFGWKHQLKYHQLSHTGERPFVCTECGKSFKTK
AALTLHCYVHTGEKPLVCPECGKGCRDQTSLNSHVRKHTGEKPFVCTECGKSYKDSSTLR
HHLQTHIR
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgttccagggggaagagaaaaagagccggacaggaaggaattcttatccagacacagga
acaagtctgagaaagagaagcagaacctcagagacctccaagatgaagaagatcagagaa
gacagaagtgaaaacattcaggccaacctcagccaaacccaaactcacaaagaattttgc
aaaacctccagtaatgattggcctccgatgcctccagagtttggtgctgatgggaaatct
cctgctctgagaacacaaaggttacaagatactgatttcagaatatcatttgactgcaaa
gagtgtggagaaagcttcgggcagcagtctaagcttgaagcccattttctgtgccacaca
ggtgagaagccatttgtctgtgttcattgtgggaaaggtttcaagaataaatacaaactt
aatctccatctaaggattcacacaggagagaagctttctgtctgtcctcattgtgggaaa
agctacagagataagactaaactgattgttcatctaaggattcacacaggagagaaacca
tttgtctgcactgagtgtgggaaaggcttcagggattcgagctctctgaaatctcacctc
cggattcacacaggagagaaaccatttgtctgcactgagtgtgggaaaggcttcaggaaa
aaccatgaactcaaatctcaccttcatattcacaccggagtgaacccatttgtctgcact
gagtgtgggaaatgtttcagggataaaagtgaactgaacattcatattaatgtacacaca
ggaaagactttcccctgtacggagtgtggcaaatcctttgcagcaaagaagaatctgaaa
aggcaccaaatggttcacactggggagaaaccacacgagtgcacagagtgtgggaaacga
ttcatggagaaaagtaaactgaacatacattatcggagtcattcgggagtgaaaccattc
agctgctgtgagtgtggagaacagtttggatggaaacaccagctcaagtatcaccaactg
agtcacactggggagaggccatttgtctgtactgagtgtgggaagagcttcaaaaccaag
gctgcactcactctgcactgttatgttcacacaggggagaaaccattagtgtgccctgag
tgtgggaaaggctgtagggaccagacgagcctcaatagtcatgttcggaaacacacggga
gagaaaccttttgtgtgcaccgagtgtgggaagagttacaaggactccagtaccctgagg
caccatcttcagactcacattagatga
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