Xenopus tropicalis (tropical clawed frog): 100498501
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Entry
100498501 CDS
T01011
Symbol
hcn4
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3 isoform X1
KO
K04956
hyperpolarization activated cyclic nucleotide-gated potassium channel 3
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xtr04040
]
100498501 (hcn4)
Ion channels [BR:
xtr04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
100498501 (hcn4)
SSDB
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Paralog
GFIT
Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
100498501
NCBI-ProteinID:
XP_002944030
Xenbase:
XB-GENE-940130
UniProt:
A0A8J0QZ60
LinkDB
All DBs
Position
8:146333054..146357248
Genome browser
AA seq
2061 aa
AA seq
DB search
MEPRHGADLPSSDMGRERAPSLPGAQGTGARTSQQLSLASPRHKPSAAPPDPTVRSNQNP
LGPVQHHHPSDESRDPTVRSIQDSPAPNQHHSSSARSIQNPPAPDQHHSSSARSIQNPPA
PDQHHSSSARSIQNPPAPDQHHSSSARSIQNPPAPDQHHSSSARSIQNPPAPDQHHSSSA
RSIQNPPAPDQHHSSSARSIQNPPAPDQHHSSSARSIQNPPAPDQHHSSSLRSIQNPPAP
DQHHSSSARSIQNPPAPDQHHSSSLRSIQNPPAPDQHHSSSARTIQNPPAPDQHHSSSVR
TIQNPPAPDQHHSSSARSIQNPSAPDQHHSSSVRSIQNPPAPDQHHSSSARSIQNAPAPD
QHHSSSVRSIQNPPAPDQHHSSSARSIQNPPAPDQHHSSSARSIQNSPDLAPNQHPHSSA
PSKENSSNEKILPEVGATGQQAMVPGPPQQAACRQHLPSGQNQPLTNGNSQPAAPVPAQP
ITPRLCQPAAPGVRQPLALDINQPYDRPHGNLPIKGAKQLSAPSPELNPAPVPGNIQLFA
PAPQNSEALALGPTQSFALHESQPPAYEISQHVAPKSIGYNHPYTPGYDRSSAQVSGQTY
TQGLRKTAQGLDQEANQPSPAQEANQPSPAQEANQPSFKRLSPSLTQELSQPTAQVPSQH
TVQVPSHSPAQVPSHSPAQVPSHSPAQVPSHSPAQVPSHSPAQVSSQFSTQGLNQSPVQI
SRKASAQGLNQHSAPLSSLPSDQMPSWPHASVHGLSQPSPHGPSQFCAQGPSPSSEGSIQ
APVQLLNQPPVQGLSQCPSQVPSHSPAQVASHSPSQVPSHSPAQVPSHSPAQVPSHSPAQ
VPSHCALEGPKPSPVPGANQPIYPSVIKSPTQAPNHQPNTHGNSQSPALESIQSPALVPS
KSSALASSQSNALVPSQSSALVPSQSSALASRKSPALVPSQSPALSSNQSLVLVPSQSPA
LVPTQYSALGSSQSPALAPSQSPTVACSQSPALVPSQSPALVPSQSPALAPSQSPTVACS
QSPALAPCQSPSVVPSQSSALASSQSPALAPSQSPALAPSQSPALVPTQPAAVISSESPA
QGPSQSPFQGSCHVPTQGSIQSPAQEPSQSPAKVPSQCPLHVPSQCPVRVPTQATAQDSC
PLTAQAPSQSPAQISSHSPAQISSQSPAQELSSLIPKLEGSEQTEVGDPGGFIQRQFGAL
LQPAVNKFSLRMFGSHKAVEIEQQRVKSAGSWIIHPYSDFRFYWDLIMLLLMVANLIILP
VGITFFKDENTPPWIVFNVLSDTFFLADLVLNFRTGIVVEDNTEIILDPHTIKMKYLKSW
FLVDFVSSIPVDYIFLIVDLETNVDTEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIH
QWEEIFHMTYDLASAVVRIFNLIGMMLLLCHWDGCLQFLVPMLQDFPEDCWVSINHMANE
SWGKQYSHAIFKAMSHMLCIGYGQQAPEGMTDVWLTMLSMIVGATCYAMFIGHATALIQS
LDSSRRQYQEKYKQVEQYMSFHKLPPDTRQRIHEYYEHRYQGKMFDEENILGELSEPLKE
EIVNFNCRNLVANMPLFANADPNFVTAMLTKLRFEVFQPGDYIIREGTVGKKMYFIQHGV
VSILTRGSKETKLSDGSYFGEICLLTRGRRTASVRADTYCRLYSLSVDNFNEVLEEYPMM
RRAFETVAMDRLDRIGKKNSILLRKRAENSSGSVNNEIIQQIVKHDRDTAHNIQDIQCLA
ATRDPNKPFIWEPLVHAPLQTAAATTNVAIALTHQQNLQANVFLPPLSLPETAYVSRQAR
RSQPSLRGSHPSSVSSPSGTQSHLQTPLGISPSSPSGVQKQSINGQCPQIPIRLSQSQRG
EPQTAAKPPILPSQVQLSRSRGTSASTSVLQQGMGPAGSPVVPGSLSGRTLHYSLSRASG
SHISLLMQQAASSPQQLVKYRSIQGLPIGRLSQDVRLMSASQPSLPNKVTHQQDGSMLQI
ASNKSSPTVSAMLVRPSLPSPSAHPQQQPSGPLVFSGRPVSGSATPQSPVSAPRPAGQSR
KGSVVFSSDVEVNKPKLPSNM
NT seq
6186 nt
NT seq
+upstream
nt +downstream
nt
atggagcccagacatggagcagacttgcccagcagcgacatgggcagggaacgggcacca
tctctacccggggcacagggcacgggggcaagaacaagccaacagctctcacttgcgagt
cccaggcacaaaccttcagcagccccccctgacccgacagtgaggtccaaccagaaccct
ctgggacctgttcagcaccatcatccttcagatgagtcacgtgaccctacagtgaggtcc
attcaggactctcctgccccaaaccaacaccattcttcttcagcgaggtccattcagaac
cctcctgccccagaccaacaccattcttcttcagcgaggtccattcagaaccctcctgcc
ccagaccaacaccattcttcttcagcgagatccattcagaaccctcctgccccagaccaa
caccattcttcttcagcgaggtccattcagaaccctcctgccccagaccaacaccattct
tcttcagcgagatccattcagaaccctcctgccccagaccaacaccattcttcttcagcg
agatccattcagaaccctcctgccccagaccaacaccattcttcttcagcgagatccatt
cagaaccctcctgccccagaccaacaccattcttcttcagcgagatccattcagaaccct
cctgccccagaccaacaccattcttcttcactgagatccattcagaaccctcctgcccca
gaccaacaccattcttcttcagcgagatccattcagaaccctcctgccccagaccaacac
cattcttcttcactgagatccattcagaaccctcctgccccagaccaacaccattcttct
tcagcgagaaccattcagaatcctcctgccccagaccaacaccattcttcttcagtgaga
accattcagaaccctcctgccccagaccaacaccattcttcttcagcgagatccattcag
aacccttctgccccagaccaacaccattcatcttcagtgagatccattcagaaccctcct
gccccagaccaacaccattcttcttcagcgcgatccattcagaacgctcctgccccagac
caacaccattcttcttcagtgagatccattcagaaccctcctgccccagaccaacaccat
tcttcttcagcgagatccattcagaaccctcctgccccagaccaacaccattcttcttca
gcgagatccattcagaactctccagatttggcacccaaccaacaccctcactcctcggca
cccagcaaggaaaactcatccaatgagaagatccttcctgaagtaggggccactggtcaa
caagccatggtccctggacctcctcagcaggcagcatgtaggcagcacctaccttctgga
caaaaccagcctctgaccaatggaaacagccagcctgctgccccagtacctgctcagcct
attactccaagactctgccagcctgctgcccctggggttaggcagcccttggccctagac
attaatcagccttatgaccggccacatggcaacttacccatcaaaggggcaaagcagctc
tcagcaccttctccagaactgaacccagctcctgtcccagggaatatccagcttttcgct
cctgccccccagaatagtgaagctctggctttaggacctactcagtcttttgctttacat
gaaagtcagccaccagcctatgaaatcagtcaacatgttgccccaaaatctattggatac
aaccatccttataccccagggtatgatcggtcttctgcccaagtgtctggccagacttat
actcaaggactcaggaaaactgcccagggactagaccaagaagccaaccagccttctcct
gcccaagaagccaaccagccttctcctgcccaagaagccaaccagccttctttcaaaaga
ctcagtccatctctcacccaagaacttagccagcctactgctcaagtacccagtcagcat
actgtccaagtacccagccattctcctgcccaagtacccagccattctcctgcccaagta
cccagccattctcctgcccaagtacccagccattctcctgcccaagtacccagccattct
cctgcccaagtatccagtcagttttctacccaaggactcaaccaatctcctgtccaaata
tcgaggaaggcttccgcccaaggactcaaccagcattctgcccctttatccagcttgcct
tccgatcaaatgcccagttggccccatgcttctgtccatggactcagccaaccttctccc
catggcccctctcagttttgtgctcaaggacccagtccctcttctgaggggtcaatccag
gctcctgtgcaactgctcaaccagcctcctgttcaggggctgagccagtgtcccagtcaa
gtacccagccattctcctgcccaagtagccagccattctccttcccaagtacccagccat
tctcctgcccaagtacccagccattctcctgcccaagtacccagccattctcctgcccaa
gtaccaagccattgtgctttggaaggccccaaaccatcccctgtcccaggcgccaaccag
ccaatttacccaagcgtcataaagtctcctactcaagcacccaatcatcagcccaatact
catgggaacagccagtctcctgctctagaatctattcagtctcctgctctagtacccagc
aagtcttctgctctagcatctagccagtctaatgctctagtacccagccagtcttctgct
ttagtacctagtcagtcttctgctctagcatccagaaagtctcctgctctagtacctagc
cagtctcctgctctatcatccaaccagtctcttgttctagtacccagccagtctcctgct
ctagtacccacccaatattctgcactaggatccagccagtctcctgctctagcacccagc
cagtctcctactgtagcatgtagccagtctcctgctctagtacctagccagtctcctgct
ctagtacctagccagtctcctgctctagcacccagccagtctcctactgtagcatgtagc
cagtctcctgctctagcaccctgccagtctccttctgtagtacccagccaatcttctgct
ctggcatctagccaatctcctgctctagcacccagccaatctcctgctctagcacccagc
caatctcctgctctagtacccacccagcctgctgctgtaatatctagtgagtctcctgcc
caaggccccagtcaatctccttttcaaggttcctgccacgttcctacccaaggatccatc
cagtctcctgcccaggaaccaagccagtctcctgctaaagtacccagtcagtgccctctc
catgtgcccagtcagtgccctgtgcgagttcccactcaggctactgcccaagattcctgc
ccattgactgcccaagcacccagtcaatctcctgcccaaatatccagccactcccctgcc
caaatatccagccaatcacctgcccaggaactcagttccctcatccctaaactagagggc
tcggaacagactgaggtgggggacccaggaggcttcattcagcgccagtttggggccctc
ctgcagccggcagtgaacaagttctctctgcgcatgtttggaagccataaggctgtagag
attgaacagcaaagggttaaatcagccggatcttggattattcacccttacagcgacttc
aggttctactgggacctgatcatgcttctcctcatggtggccaacctgattatccttcct
gtgggaatcacctttttcaaggatgagaacacccctccgtggatcgtgttcaacgttctg
tcggacactttcttcctggctgacctggtgctgaatttccgtactgggatagtggtggag
gacaacacagagattattttggaccctcacaccatcaagatgaagtatctcaagagctgg
tttctggtggatttcgtgtcctctatcccagtggattatatttttctcatagtggattta
gagacaaatgtagacacagaggtttacaagacggctcgagccctacggatcgtgaggttc
actaagattctcagcctccttagactcctgcgtctttctcggctgattcgctacatccac
cagtgggaggagatcttccacatgacgtacgacctggccagcgcggtggtgcggatcttc
aacctgattggaatgatgctcttgctgtgccactgggacggttgcctgcagttcctggtg
ccgatgctgcaggatttcccagaggactgttgggtctccatcaaccacatggcaaatgag
tcctggggaaagcaatactctcatgctatattcaaggccatgagtcacatgctgtgcatt
gggtatggccaacaggcgcccgaaggaatgaccgacgtttggctcaccatgctcagtatg
atcgttggggcaacatgctacgccatgtttatcggccatgccacagcgctcatacaatct
ctggattcttctcgacggcagtaccaggagaagtacaaacaagtggagcagtacatgtcc
ttccataagctcccccccgacacgcggcagaggatccatgagtattacgagcatcgctac
caggggaagatgtttgatgaggaaaacatcctgggggagctgagtgaacccctgaaagaa
gagattgtcaacttcaactgccggaaccttgttgcaaacatgcccctcttcgccaacgca
gaccccaattttgtgacggccatgttaaccaagctgcgcttcgaggtcttccagcctggg
gattacatcatacgtgagggcactgtgggtaaaaagatgtatttcatacaacatggagtg
gtcagcattctcaccaggggcagcaaagagaccaaactatctgacggctcctactttgga
gagatctgcctactgacgcgggggcgccggacggcgagtgtgagagcagacacctactgc
cgcttgtactcgctctctgtggataatttcaacgaggtcctagaggaatatcccatgatg
aggcgcgctttcgaaaccgtggccatggatcgcctagacaggatcggcaagaagaactcc
atccttttacgtaagagggcagagaacagctcgggatcagtgaacaacgagatcattcag
cagatagtgaagcacgaccgggacacggctcacaatatccaggatattcagtgcttggcg
gccacacgggaccccaacaagccttttatttgggagcctcttgttcacgctccactacaa
accgcagccgccaccaccaacgtggccatcgctctgactcaccaacagaaccttcaagcc
aatgtgtttttgccaccattgtcgctcccagagacagcctacgtgagtcgccaagccagg
cggtctcagcccagcctacgagggtcccatccctcctctgtcagttctccatcaggcact
cagtctcacctgcaaaccccacttggaatttctccatcttccccttctggggtccagaaa
cagagcatcaatggtcagtgtcctcaaattcccatacggctgagccaatcacagagaggg
gaaccccaaactgcggccaagccacctattctcccatcgcaggtgcagttgtctcgttca
cggggaacgtcggcatccacctcggttctgcagcagggcatggggcccgccggctcccct
gtggtcccaggatcactttctggtaggactctgcactacagcttatctagagccagcggc
tcccacatttccctgctgatgcagcaggcagccagttccccccagcagttggtgaaatac
aggagcatacagggacttcctattggaagactttcacaagatgtccgactcatgtcagct
tctcagccttctttgcccaacaaggtcacccaccagcaggatggttctatgctccagatt
gccagtaataaatcctcccccactgtatcggcaatgttagtcaggccatccttgccatcg
ccctcagctcacccacagcagcagccttcagggcccctggtcttttctggacgaccagtc
agtggctcagctactccacagtcccctgtatctgccccaaggccggctgggcaatcacgc
aagggctctgtcgtgtttagctcagatgtggaagtcaataaaccaaaattaccatccaat
atgtga
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integrated database retrieval system
