Xenopus tropicalis (tropical clawed frog): 100498548
Help
Entry
100498548 CDS
T01011
Symbol
abca2
Name
(RefSeq) ATP-binding cassette sub-family A member 2 isoform X1
KO
K05642
ATP-binding cassette, subfamily A (ABC1), member 2
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr02010
ABC transporters
xtr04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
100498548 (abca2)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
100498548 (abca2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xtr02000
]
100498548 (abca2)
Transporters [BR:
xtr02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
100498548 (abca2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_15
DUF4162
Motif
Other DBs
NCBI-GeneID:
100498548
NCBI-ProteinID:
XP_031746716
Xenbase:
XB-GENE-969968
UniProt:
A0A8J1IQD0
LinkDB
All DBs
Position
8:complement(3211074..3261729)
Genome browser
AA seq
2496 aa
AA seq
DB search
MGFLHQLHLLLWKNITLKRRSPWVLTFEIFIPLVLFFILLGLRQKKPTIPVKEVSYYTAA
PLTSAGILPVMQSLCPDGQRDEYGFLQYTNSTVTQLLERLTEVVGDSNLFDSNRPGLGEE
LESLKHHLESLSSDPSSFENHFHSQSGFTLDSVVKDKEAFRGFLSRNLSLPSDIVDLLAG
SNINLQEVYHLFFSSPYLSPKEPPDRSHWDAATSVGEHLLNLPGLLPGKWKSLKKGLIHK
ALKDPLRSGHKLALLRLLTLALGLSIPNLSPESYDPQEVVKDLEEIIFTPSALESLTCEG
SSDELGNILKTSERKRPLLTLYHNLICNGSQSLRRERFAELADELKEQVDVQKTVSRLRL
DEVNATATQRRLQSLLEDLLEVEKILKDVDILSALAKLLPKGACASKSVLPTANSTSWGF
NSTSGFNFSTEAEEEAKKQEDEVDEENPRSQFSAFVQLWAGLQPILCGINRTIEPEALKQ
GNMSSLGFTSKEQRNLGLLVHLMTSNPKILYSPVGTEVDKVIRKANETFAFVGNVTRYAW
MWLNISAEIRGLLEEGILQRRIEWLQQFTNDLQKHPELLNGSDSELLRKVLSSNFTMPNA
SSLLQQLDTIDNAACGWTRFMSKVSVDIFKGFPNEDSIVNYTLNQAYHDNVTVFASVIFQ
TQKDGSLPPHVMYKIRQNSSFTEKTNEIRRAYWRPGPNTGGRFYFLYGFVWIQDMMDRAI
ISTIVGHDVVEPGNYVQMFPYPCYTRDDFLFVIEHMMPLCMVISWVYSVAMMIQHIVAEK
EHRLKEVMKMMGLNNAVHWVAWFITGFVQLSISVTALTGILKYGQVLMHSNVFIIWLFLS
IYAVATIMFCFLVSVLYSKAKLASACGGIIYFLSYVPYMYVAIREEVAHDKITAFEKCIA
SLMSTTAFGLGSKYFALYEVAGVGIQWRTFSQSPVEGDDFNLMLSMMMLIIDTMVYGILT
WYIEAVHPGMYGLPRPWYFPFQRSYWLGSGRIETWEWSWPWSRPPRLSIMEEDQACAMES
RRLDETRGIEEEPSHLPLVVCIDKLTKIYKTGKKLALNKLSLNLHENQVVSFLGHNGAGK
TTTMSILTGLFPPTSGSATIYGHDIRTEMNEIRKSMGMCPQHNVLFDKLTVEEHLWFYSR
LKGMAEEEIRKEMDKMIEDLELSNKRHSLVQTLSGGMKRKLSVAIAFVGGSKAVILDEPT
AGVDPYARRAIWDLILKYKQGRTILLSTHHMDEADLLGDRIAIISHGKLKCYGSPLFLKS
TYGDGYKLTVVKNQSGPDTGHTGPSCISPCSEPRVSQFIKKYVASCLLVSDTNTELSYIL
PSESVRKGCFERLFQHLEQNLSDLELTSFGLMDTTLEEVFLKVSEEDQSLENSDADIKES
KKDTLRPLIQPDGGTGSPLTDALEKPEVELNNFASEAKTSQSPSSLRSGSSSSVGSVRGD
EGGAYAEFYGDYSPLFDNLQDAENLSLHEPETEEQVLDGQGSYKLEGSWLKLRQFHGLIV
KRFHCAKRNTKALFSQILLPAFFVCVAMTVALSVPEIGDLPPLILSPSQYHNYTQPKGNF
VPYANEEQPEYRIKLSPDAGPQQLVNTFHLPSGIGATCVLKTAFNSTLDQLVQSLNMNSS
ESKMLAAQYFDAMCVDSFTQGLPLSNFVPPPPSPAPSDYPPDEDLSRLWNATTFPPEPVQ
AEAVTSTPSLPRRIHEPIRCTCSMQGTGFSCPSGVGGHPHQMKVVTGDIMVAISGRNVSE
YLLYTSDRFRLHRYGALTFGNVQKAIPASFGAKAPPMLRKIAVRHTAQAYYNNKGYHSMP
TYLNALNNALLRANLPKGKGNPAAYGITVTNHPMNKTSASLSLDYLLQGTDVVIAIFIIV
AMSFVPASFVVFLVAEKSTKAKHLQFVSGCNPVIYWLANYVWDMLNYLVPATCCIIILFV
FDLPAYTSPTNFPAVLSLFLLYGWSITPIMYPASFWFEVPSTAYVFLIVINLFIGITATV
ATFLLQLFEHDKDLKLVNSYLKSCFLIFPNYNLGHGLMEMAYNEYINEYYAKIGQFDKMK
SPFEWDIVTRGLVAMTIEGFVGFFITIMCQYHFFRKPQRLPISNKPIEDDDVDVANERQR
VLRGGADNDMLKIENLTKVYKSRKMGRILAVDRLCVGVRPGECFGLLGVNGAGKTTTFKM
LTGDESTTGGEAFINGHSILKELLQVQQTIGYCPQFDALFDELTAQEHLELYTRLRGIPW
KDEERVVKWALEKLELAKYADKPAGTYSGGNKRKLSTAIALIGYPSFIFLDEPTTGMDPK
ARRFLWNLILDIIKTGRSLVLTSHSMEECEALCTRLAIMVNGRLKCLGSIQHLKNRFGDG
YMITVRTKSSINVKEVVRFFNRNFPEAVLKERHHTKVQYQLKSEQVSLAQVFSKMEQVLD
VLGIEDYSVSQTTLDNVFVNFAKKQSDNMEQQESAPNCAVATPLDRVLSLLRPRTTPTEL
RALVVEEQEDLDTDDEGLISFEEERAQLSFNTDTLC
NT seq
7491 nt
NT seq
+upstream
nt +downstream
nt
atggggttcctacaccaactgcacctcctgctatggaagaacatcaccctgaagcgccga
agcccctgggttctgacgttcgaaatctttatccctttggtgctgttctttatcctcctt
ggcctgagacagaagaaaccaaccatcccagtgaaggaagtctcatactacacagctgcc
ccactgacctctgctggaatattaccggtcatgcagtctctgtgcccagatggacagagg
gatgagtacgggttcctgcaatacaccaattccacagtgacgcagctgctggagagactg
acggaagtggtgggagacagtaacttgtttgactccaaccgacccggtttgggagaggaa
ctcgaatccctcaaacatcacttggaatcactgagcagcgaccccagctccttcgagaac
catttccacagccaatcagggtttacattggactcagtggtgaaggataaggaggcattt
cggggtttcctgagccgcaatctctcccttcccagcgacattgttgatttgctggccgga
tccaacatcaacctgcaagaggtctaccatctgtttttcagttctccgtatctgtctccc
aaagagccgccggacaggagtcactgggatgctgcaacatcggttggagaacatctcctc
aacctgcctgggcttcttccagggaaatggaaatcactgaagaaggggctgatccacaag
gcgctgaaggaccccttgagatcggggcacaagttggcgctacttcgactcctgacgttg
gctcttgggttgtccattcccaacctgtcgcccgaaagctacgacccccaagaggtggta
aaggacctggaggagatcatcttcaccccttctgccttggaatccctgacctgtgaaggg
agctcggacgaacttggaaatatcctaaaaacctccgagcgcaagcgccccctgttgact
ctctaccataacctcatttgcaacggcagccaatcactgcgtcgggagcgcttcgcggag
ctggcggatgagctcaaggagcaggtcgatgtacagaagacggtcagcaggctgcggttg
gatgaggtaaatgccacagcaacccaacgccgccttcagtcgctgctcgaggacctgctg
gaagtggagaagatcctgaaggacgtggacattctgtcggctctggccaagctgcttcct
aagggggcttgtgctagcaaatccgtcttgcccactgcgaactcaaccagctgggggttc
aactccaccagtggcttcaacttcagcaccgaggccgaagaagaagccaagaagcaagag
gatgaggtagacgaggagaacccaaggagtcaattctcggcctttgtgcaactgtgggca
gggctgcagcctatcctgtgtggcatcaaccggactattgaaccggaggcgcttaaacaa
ggcaacatgagttccttggggttcaccagcaaagagcaaaggaatctggggctccttgtt
cacctgatgaccagtaaccccaagatcctctactcccccgtgggcaccgaggtcgacaag
gtcatccggaaggcgaatgagacctttgcgttcgtgggaaacgtgactcgatacgcctgg
atgtggctgaacatttcggcagagatccgcgggctgctggaagaagggatcctacagaga
cggatcgagtggctacaacagttcaccaatgatcttcagaaacacccagagcttctaaat
gggtcggacagtgagcttctacgtaaggttctcagttccaacttcaccatgcccaacgcc
agcagcctcttacagcaactagacaccatcgacaacgccgcctgtggttggacgcgcttc
atgtccaaggtgagcgtggacatctttaagggcttccccaatgaggacagtattgtcaac
tatactctcaaccaggcctaccatgataatgtcacagtgtttgcaagtgtgatcttccag
actcagaaagatggctccctcccgccccacgtcatgtacaagatacggcagaactccagc
ttcacggaaaagaccaatgaaatccgtagagcctactggaggccaggcccaaacaccgga
ggacggttctacttcttgtacggcttcgtctggatacaagacatgatggaccgagcaatc
atcagtacaattgtgggacacgatgtggtggaacctgggaactatgttcagatgttccca
tatccatgttacacacgtgatgattttctttttgtaatcgagcacatgatgcccctgtgc
atggtcatctcttgggtctattccgtagccatgatgatacaacatattgtggccgaaaag
gagcatcgtctgaaggaggtgatgaagatgatgggcctgaataacgcagtgcactgggta
gcctggtttattacaggctttgtacagctctccatctcggtcactgctctgaccggcatc
ctgaagtacggccaagtccttatgcacagcaatgtcttcatcatttggctcttcctttca
atctacgcagtggccaccatcatgttctgtttcttggtgtccgtgttgtactcgaaggcc
aaactagcgtcggcctgtggtgggatcatctacttcctgagttacgtgccttacatgtat
gtggcgatccgcgaagaggtggcccatgacaagatcaccgctttcgagaaatgcatcgcg
tctctcatgtctacgacagcctttggccttggctccaaatactttgccctgtacgaggtg
gctggtgtagggatacagtggcgcacttttagccaatcaccggtggaaggagatgacttt
aacctgatgctttcgatgatgatgctgatcattgacactatggtgtatggaatcctcact
tggtacatcgaggcagttcacccaggtatgtatggcctaccccgtccctggtacttccct
tttcagaggtcctattggctgggaagtggtcgaatagaaacatgggagtggtcctggcct
tggtcccgcccacctcgactgagcatcatggaagaggatcaagcctgtgctatggagagt
cgtcgcttggatgagactcgggggatagaggaagagcccagccacctaccgctggtagtg
tgtatcgacaaactcaccaagatctacaagactggcaagaagttggcgcttaacaagttg
agcttgaaccttcatgagaaccaggtggtttccttcttggggcacaatggagcgggcaag
accactaccatgtcaatcctgacgggtctgtttcccccaacgtccggctctgccactatt
tatggccacgacatccggacagaaatgaacgagatccggaagagcatggggatgtgccct
cagcacaatgttctgttcgataaactgacagtggaggagcatctctggttctactcgcgg
ctcaaggggatggcggaagaggagatacgcaaggagatggataagatgattgaagacctg
gagctctccaacaagcggcactccttggtgcagaccctctccggtggcatgaagcggaag
ctgtctgtggccattgcgtttgtcggtggttcaaaggctgttattttggacgagccgacg
gccggagtggatccctatgcaaggagagccatctgggacctcatcctaaaatacaaacaa
ggccgtacaatcctgctctctacacatcacatggatgaggcagaccttctgggagaccgt
attgccattatttcccatgggaagctaaagtgctacgggtcgccactcttcctgaagagc
acttacggagatggctacaagctgaccgttgtcaagaaccagagtggcccagacaccggc
catactggtccctcctgtatcagtccctgctcagagcctcgagtgtctcagttcataaag
aagtatgtggcctcctgcctactggtgtccgacaccaacactgagctgtcctacattctg
cccagcgagtccgtcaggaagggatgttttgagcgcctctttcagcacttggaacagaac
ctaagtgacttggaactgaccagttttggcctgatggacaccaccctagaggaagtattt
ctcaaggtctctgaagaagatcagtctctagaaaacagcgatgcagatatcaaggagtca
aagaaagacaccctgagacccctcatacagcctgatgggggaacagggtcaccactgacc
gacgctttggaaaagccagaagtggaactcaacaactttgcttcagaagccaaaaccagc
caatcccccagctcgctacgttccggctcttcttcttctgtgggttccgtgcgcggggat
gaaggtggcgcctatgccgagttctatggggactactcccccttatttgataacctgcag
gatgcagaaaacctcagcctacacgaacccgagacagaagaacaggtcttggacgggcaa
ggaagctacaaattggaaggctcttggcttaagctgcgccagttccacgggctcatcgtc
aagaggttccactgtgccaagcgcaacactaaggccctgttctcccagatcctccttccg
gcgttcttcgtctgtgtcgccatgacggtggcattgtctgtccctgagatcggtgacctt
ccaccgctgatcctgtcgccctctcagtaccacaattacactcagcccaaggggaatttt
gtgccctatgccaacgaggagcaaccagagtacaggatcaagctgtccccagatgcgggc
ccccagcagctcgttaatacatttcacctgccctcgggcatcggggccacgtgtgttctg
aagacggcattcaatagcactctggatcagctcgtccagtccctcaacatgaacagcagc
gagtcaaagatgttggctgcccagtacttcgacgccatgtgtgttgactcgttcacccaa
gggctacccctttctaacttcgtgccgcctccgccttcgcccgctccctcggattatccc
cccgatgaggacctctcccgcctctggaatgccaccaccttcccacccgagcctgtccaa
gcagaagccgtcacctccaccccgtccctccctcgtcggatccacgagccaatcagatgc
acctgttcaatgcaaggcactggcttctcctgccctagtggtgtcgggggccacccacat
cagatgaaggtggtgacgggagatatcatggtggccatcagcggacggaacgtttcggaa
tatctcctgtacacgtcggaccgattcaggttgcacaggtatggagccctgacgttcggc
aatgtgcagaaagccatcccagcatcctttggtgcaaaggctcctcccatgttgaggaag
atcgcggttcggcacacagcccaggcttactacaacaacaaagggtaccacagcatgcca
acttacctcaatgccttaaacaatgccctcttgagagccaacctgcccaagggcaagggg
aaccctgcagcctatggtatcaccgtgaccaaccatccaatgaacaagaccagcgccagc
ctctcccttgattatctgctacaaggcacggacgtggtcatcgccatctttatcatcgtc
gccatgtccttcgtcccggcgagttttgtggtcttcctcgtggccgagaaatccaccaag
gccaagcacttgcagtttgtcagcggctgtaaccccgtcatctactggctggccaactac
gtttgggatatgttgaattacctagttcctgccacctgttgcatcatcatcctcttcgtg
tttgacctccctgcctacacttcgccgaccaactttccagccgtcctgtcgctctttctc
ctctatggatggtctatcacccctataatgtaccctgcctccttctggtttgaggtcccc
agcacggcctatgtcttcctcatcgttattaacctctttatcggcatcacagccacggtg
gcgaccttcttgttgcagctctttgaacatgacaaggacctcaaattggtcaacagttac
ctgaaaagttgcttcctcatcttccccaactacaacctggggcatgggctgatggagatg
gcgtataatgagtacattaacgagtactatgccaagatcggtcagtttgacaaaatgaag
tccccgttcgagtgggatatcgttactcggggcctggttgccatgacaatagaaggattc
gtcggtttcttcatcaccatcatgtgccagtaccatttcttcagaaaaccacagcggctg
cccatttccaacaagcccatagaggacgacgacgttgatgtggccaatgagaggcagcgg
gtactgaggggaggagccgataacgatatgctgaagattgagaacctgaccaaggtgtac
aagtcaaggaagatgggccggatccttgcggttgatcgtctctgtgttggggtcagaccg
ggggagtgtttcgggctgttgggggtcaatggtgccggcaagaccaccacattcaagatg
ctaaccggagatgagagcaccacgggcggagaggcttttatcaatggccacagtatcctg
aaggagctcctccaggtccagcagaccattggctactgcccgcagttcgatgccctgttt
gacgagctgacggcccaagaacacctggagctatatacccgcctcaggggcattccctgg
aaggacgaggagagggtggtgaaatgggccctggagaaactggagctggccaagtacgcg
gacaagccggccggcacctacagcggggggaacaagaggaagttgtccaccgccattgca
cttattggttacccgtccttcatctttctggatgagcccaccaccggcatggaccccaag
gcgcgccgcttcctctggaacctcattctggacatcatcaagaccggccggtccttagtg
ctgacgtcgcacagcatggaggagtgcgaagctctatgcacccgactcgccatcatggta
aacgggcgtctgaagtgtctcggcagcatccagcacctaaagaacaggtttggggacggc
tacatgataaccgtaaggacaaaatccagcataaacgttaaggaggtcgtacggttcttc
aacaggaactttccggaagccgtacttaaggagcggcaccacaccaaggtccagtaccag
ctgaagtccgaacaggtgtcgttggcccaggtgttcagtaagatggagcaggttctggac
gtccttggaattgaagattattctgtgagccagaccaccctggataatgtatttgtcaac
tttgcaaagaagcagagtgataacatggagcagcaagagagcgcccccaactgcgcagta
gcgacgccgctggacagggtgctgagccttctcaggcctcggacgacacccaccgagctc
cgggcactggtggtagaggagcaggaggatctcgacaccgacgacgaggggctcataagc
tttgaggaggagagggcccagttgtcgttcaatacagacacgctctgctag
DBGET
integrated database retrieval system
