Xenopus tropicalis (tropical clawed frog): 100498594
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Entry
100498594 CDS
T01011
Name
(RefSeq) ornithine decarboxylase isoform X2
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr00330
Arginine and proline metabolism
xtr00480
Glutathione metabolism
xtr01100
Metabolic pathways
xtr04148
Efferocytosis
Module
xtr_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
100498594
09106 Metabolism of other amino acids
00480 Glutathione metabolism
100498594
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
100498594
Enzymes [BR:
xtr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
100498594
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-GeneID:
100498594
NCBI-ProteinID:
XP_012813617
UniProt:
A0A6I8R480
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All DBs
Position
2:90406209..90432805
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AA seq
453 aa
AA seq
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MERNLHCNACHLQERDRDRTMDISELHTCTFLAGMNMTILDKGMSVQQFVKQKSISNSAS
GNEDAFYVADLGDIIKKYWQFSKGLPRVKPFYAMKCNSTRAVLQMLAFLGTGFACCSMAE
LDMVLRMGVPAADIVFVNPCKQVSHIRYAAEYGVRKMTFDCESELLKLAASYPQAEMILQ
IVTDNKEPWHTLSGICGVYISECENLLKKAKSLNMDVFGVSFHTGSRCKDTHSFHKAIED
ARKVFDIGKNLGHQMRLLDIGGGFPGDSESRPTFEKFAEVIRISLDQSFPCNEDVQIIAE
PGRFYVTSAFTAALNIVTKKVVTKKDGEERRQFSYVLNDGIFGSFFLNYMQMEETWPVVG
KDFDTAQELFPSILWGPTCASEDKIVKDIDLPELEMGDWIIFPNMGAYSMSMTSNFNAFS
TPKIYFVFTRKMWTVGQILKKEKLLQNHPQNNL
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggaaaggaaccttcactgtaacgcctgtcacctacaggaaagagatagagacaggaca
atggacatttctgaattgcatacttgcacttttctagctgggatgaatatgaccatactg
gacaagggaatgtcagtacagcagtttgtgaagcagaaatccatcagtaattcagcatca
ggaaatgaagatgccttttatgtcgcagaccttggagacataataaagaaatactggcag
ttctcaaaagggctacctcgagtaaagcctttctatgcaatgaaatgcaacagtacaagg
gcggttctccaaatgctggcatttttgggaacaggatttgcttgttgtagtatggcagag
ttagatatggtgctgaggatgggagtaccagctgctgacattgtctttgtcaacccctgt
aagcaggtatctcatatcagatatgctgcagagtatggtgtgcgcaaaatgacttttgat
tgtgaatcagaacttttaaaattagcagcatcttacccacaggctgagatgattcttcaa
attgtaactgacaacaaagagccttggcacaccctcagtggcatttgtggtgtctacatc
agtgagtgtgagaatcttctgaagaaagcaaaaagccttaacatggatgtatttggtgtg
agttttcatactggctctcgatgcaaggacactcattcctttcacaaagccattgaagat
gccagaaaggtatttgatattgggaaaaacttgggacatcaaatgagactcctggatatt
ggagggggttttcctggggactctgagtcccgaccaacatttgagaagtttgcagaagtc
atccgcatatctctggaccaaagctttccctgcaatgaggatgttcagattatcgcagaa
cctggaagattttatgtgacatctgctttcacagctgctcttaatattgttactaagaag
gtggtgactaagaaagatggagaggaaagaagacaattctcctatgtcctaaatgatgga
atttttgggtcattttttcttaattatatgcaaatggaagagacatggccagttgtaggg
aaggactttgacactgcacaggagctctttcccagtatactttggggaccaacatgtgca
agtgaagataaaattgtgaaggatatagatctcccagaattggaaatgggagactggatc
attttcccaaacatgggggcttactccatgtcaatgacttccaatttcaatgcattttct
acacccaaaatatattttgtgttcaccaggaaaatgtggactgttggacagatcctaaaa
aaagaaaagttactgcagaatcaccctcagaataatttgtaa
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