Xenopus tropicalis (tropical clawed frog): 100498644
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Entry
100498644 CDS
T01011
Name
(RefSeq) gastrula zinc finger protein XlCGF57.1-like isoform X1
KO
K09228
KRAB domain-containing zinc finger protein
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
100498644
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
100498644
Transcription factors [BR:
xtr03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
100498644
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-LYAR
zf-C2H2_jaz
zf-C2H2_6
zf_UBZ
zf-C2H2_11
zf-met
Zn-ribbon_8
LIM
zf-trcl
HypA
Motif
Other DBs
NCBI-GeneID:
100498644
NCBI-ProteinID:
XP_031760088
UniProt:
A0A803J9R5
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Position
6:complement(4255439..4277410)
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AA seq
638 aa
AA seq
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MEGSAVPLADGGASEDKADILQIKIKEEDSDFEDHLTTKESSSFADGVLQIKTEKEEPDS
EDPINPMGSSADPLTDGGLLEVKLESSENEKLGWEDQLNAINSVVTSDENFFKDEESHVS
ETATQSRNRNSQTPGTSDISETLDAAVEPSKPRNQMLLKGEEPNPCSECEEQLSTDIRLS
VHQHEEEKKENSHPECVRKNLRKSCLGSRWKSHMGRNHSLARKAGRNVLKGNIRLLYQKI
HSTEKPFTCTECWKTFSFQSHLLTHQKLHTGEKPFTCTECGKRFAQKGHLYRHQMVHTGE
KPFSCTECGKTFSDQSNLSAHQKRHTGVKPFTCSECGKSFYTKGGFSRHQEVHTEEKQYI
CAQCGKRFAHKYNLNTHIKIHSAKKSFACTKCGKMFAKKAVLGRHMEIHKPRKPHPCAEC
GKTFTLEFSLLAHQKLHTGESPYSCTECGKIFTSKHSLLSHLKRHTGERNFTCTQCGKAF
TWKSTLQAHYSTHSEKKTLNCVECGKVFVHERSLKAHHKMHTGEKPFTCMECGKVFPYKG
SLKAHYKIHTGEKPFTCTECGKTFSQKTALLSHCKTHTREKHFSCTECGKSFLHKYRLNI
HQKIHDRGKLFSCTQCGERFSEKSQLSLHWEIHMGDLL
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atggagggctcggccgttccactcgctgacgggggtgcctcagaggataaagcagacata
ttgcagataaagataaaggaagaagattcagactttgaagatcatctgaccacaaaagaa
agctcatcatttgctgatggggtattacagataaaaacagagaaagaggagcctgactct
gaagatcctataaaccctatggggagctcagcggatccacttactgatggggggcttctg
gaggttaagctagaaagttcagagaatgagaaactgggttgggaagatcaactgaatgca
attaactcagtagttacttctgacgagaatttctttaaagacgaggagagtcatgtctct
gaaaccgccacacagtccagaaaccgaaatagtcagactccaggaaccagtgatatctct
gagacattggatgcagccgtggagccgtcaaagccaagaaaccagatgctcctcaaggga
gaggaaccaaatccctgcagcgagtgtgaggagcagctcagtactgatatacgtctgtct
gttcatcaacacgaagaagaaaaaaaagaaaattcacacccagagtgtgtcaggaagaac
ttgagaaaaagttgccttggctcacgttggaaaagtcacatggggagaaaccattccctt
gcacggaaagcaggaagaaatgttttgaaggggaacatccgtctcttatatcagaaaatc
cactcaactgagaaacctttcacctgtacagaatgttggaagactttttcttttcagagc
catcttctcactcaccagaaactccatactggggagaaaccatttacatgtacagaatgt
gggaaaagatttgctcaaaagggccacctttacaggcaccaaatggtgcacacaggggag
aaacccttctcgtgcacggaatgtgggaagacattttcagatcagagcaacctttctgca
caccagaaacgccacacgggggtgaaaccattcacctgctcagaatgcgggaaaagcttc
tatactaaaggcggcttttctaggcaccaggaagtgcacacggaggagaagcaatacatt
tgtgcgcaatgtgggaaacgatttgctcacaagtacaacttgaacactcacataaagatc
cacagtgcaaagaaatcgtttgcttgtaccaaatgcggcaaaatgtttgctaaaaaagcc
gtccttgggcgacacatggaaatccacaagccgaggaaaccgcatccctgcgccgagtgt
gggaaaacgtttactctcgagttctctcttctcgcacatcagaaactccacaccggggag
agcccgtactcctgtacggaatgtgggaaaatattcacctccaagcactctcttctctcg
caccttaaacgccacactggggagagaaatttcacttgtacacaatgtgggaaggcattt
acttggaaaagtaccctccaggcacactacagcacccactcggagaaaaaaacgttaaat
tgtgtggaatgtgggaaagtatttgtgcatgagcgcagcctgaaggcccatcacaaaatg
cacacaggggagaaaccattcacttgcatggaatgtgggaaagtgttcccttacaagggc
agcctgaaggcgcattacaaaatccacactggggagaaaccattcacctgcacggaatgc
gggaaaacgttctctcagaagaccgcacttttgtcgcactgcaaaacgcacacaagggag
aaacacttttcatgtacagaatgtggtaaaagttttttgcacaaatacagacttaacata
caccaaaaaatccacgaccggggcaaactgttctcttgtacgcaatgcggggaaaggttt
tccgaaaagagccagctcagccttcactgggaaatccacatgggggatctgttgtga
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