Entry |
|
Symbol |
rrp8
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Name |
(RefSeq) ribosomal RNA-processing protein 8 isoform X1
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KO |
|
Organism |
xtr Xenopus tropicalis (tropical clawed frog)
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Brite |
KEGG Orthology (KO) [BR:xtr00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:xtr03009]
100498652 (rrp8)
Enzymes [BR:xtr01000]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.287 25S rRNA (adenine645-N1)-methyltransferase
100498652 (rrp8)
Ribosome biogenesis [BR:xtr03009]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
100498652 (rrp8)
|
SSDB |
|
Motif |
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Other DBs |
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LinkDB |
|
Position |
2:complement(180527592..180656350)
|
AA seq |
502 aa
MGRCSRESHIEQGCDWFIWVSGWGRPTAMFDLCEWNDNSEAQSLTECLARNPQGAAKKDK
AALSRRKRTKRNRELLDILHSLEPPDNRQQHPHTPGALTSRALSDGATEPPDCSPDAPLP
AVCPALPPEPRLSRKQWRNKQKSQKRQKNKFKPSSECSRGGVERTGGAGEPQPGYGGEKR
GASVQSGTAGQQKPTEMLGGPEETVAAKRARPEPITAGSAHVGSAVAPGDKPGALLQKRS
VQKLKKMMQRGGQLSEAGATSTEGPELLAEEDPVGESAPSDRSSSLRSRMEERLSSARFR
YINQQLYTSDSHEALRLFQNDPEAFTVYHKGFSQQVQHWPVSPLAQIIKYIKNRPPSLVV
ADFGCGDALIARSVRNTVHSFDLVALNDHVTVCDMAKVPLSDETVDIAVFCLSLMGKNIG
EFLQEANRVLTPGGVLLLAEVSSRFDDIRQFLSAMSQLGFKNVAKNTDNSHFFLFEFSKS
GAARDRVRHPGLELRPCLYKKR |
NT seq |
1509 nt +upstreamnt +downstreamnt
atgggaaggtgctcgagagagtcccacatagagcagggctgtgattggttcatctgggtt
tctgggtggggccgaccgaccgccatgtttgacctctgtgagtggaacgataattccgag
gcgcagtcactgaccgagtgtttggccagaaatccccagggagcagccaagaaagataaa
gctgctcttagcaggagaaagcgaacaaagcgaaaccgggagctgctggacattctgcat
tcactcgagccccccgataatcggcagcagcaccctcacaccccaggggccctgacttcc
agagctctgagtgatggggccacggaacctcccgactgtagccctgatgcccccctgcca
gctgtttgccccgcgctgccccctgagccacggctgagccgcaagcaatggaggaataaa
cagaagagccagaaacggcagaagaacaaattcaaaccttcctctgaatgttccaggggg
ggtgtggagaggactgggggggcaggggaaccccaaccagggtacggaggggagaagaga
ggggcgagtgtacagagtggcacggcggggcagcagaagcccacagagatgctcgggggg
ccggaggagacagtggcagcaaaacgtgccaggcccgagccaatcactgctggctccgcc
catgtagggtcagctgtggcccctggagataagcctggggccctcttgcagaagcgctcg
gtgcagaagctgaagaaaatgatgcagagaggcgggcaactgagcgaggccggggcaact
agtacggagggtcctgagcttctagcagaggaggatccagtgggggagagcgctccctct
gaccgctcctcgtcgctgcgctcccgtatggaggagcgcctcagctccgcccgcttccgc
tacatcaaccagcaactctacacgtccgacagtcacgaggccctccgcctgtttcagaac
gacccggaagcttttaccgtctatcataaaggcttctcccagcaagtccagcactggccc
gtcagcccactggcccagatcatcaagtacatcaagaaccggcctccctcgctggtagtg
gcagatttcggctgcggagatgcccttatagctcggagtgtgcggaacacggtccattcc
tttgacctggtggctctgaatgatcatgtgactgtgtgtgacatggccaaggttccccta
tcagatgagactgtggatatcgctgttttctgcctctctctcatggggaagaacatcggg
gagttcctgcaggaggcgaacagagtcctcaccccgggaggagtgctgctattggctgaa
gtgagcagtcgttttgatgacatcaggcagttcctgagtgcaatgtctcagctgggattt
aagaacgtagcgaagaacacggacaacagtcacttcttcctgtttgagttcagcaagagc
ggcgccgcgcgggatcgggtcaggcacccggggctcgagctgcgcccctgtctttataag
aagaggtga |