Xenopus tropicalis (tropical clawed frog): 101730277
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Entry
101730277 CDS
T01011
Name
(RefSeq) nyctalopin
KO
K08129
nyctalopin
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
xtr00535
]
101730277
Proteoglycans [BR:
xtr00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class IV
101730277
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
LRR_9
LRRNT
LRR_6
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
101730277
NCBI-ProteinID:
XP_004917450
UniProt:
A0A8J0R6V6
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Position
8:66621569..66631821
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AA seq
436 aa
AA seq
DB search
MGEELTNTTCPGMCHCSSEDDIQCDEAGLTNLPPDLPASAVSLDLAGNLLQILTFDAFRR
VPFLEILCLSQNSLTFLYPGAFIALYNLRELNLSKNPRLTYLHAHTFRGLSHLLSLDLSH
CNIFEIHPLVFSHVLSLENLDMGFNKMRYIPQAFRKLQNITRLSLEKNHIEAIGINSFKY
QHALRDLNLRRNRIWVIQIDAFNQLNKLNVLNLGHNSISHFPNQLFSGLIQLKIMHLEAN
KIGSVNCSFSRLTNLKKLHLNNNQITWITRNAFGSLKHVQLLHLSKNNLTSMPSHLFSSM
PKLRYVFLSFNPWSCDCSMSWIARWLVSYDGMIQGMHCMYGLAHQSASHVYMQNGIMCLQ
EGFTEGDCVESSDQFQNEKFDQCHRHINYHFRKHHSSVSLYHMLMCPIGWIGWSSSVMLL
NEDSKTSTEIVIALCI
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgggagaagaactcacaaatactacgtgccctggaatgtgtcactgttcctctgaagat
gatattcagtgtgatgaggctggcctcacaaaccttcctccagacctacctgcaagtgcg
gtatctctggacttggctggcaatctgcttcagatacttacctttgatgcttttagaagg
gtcccttttcttgagatcctttgcttaagccagaacagcctgactttcctttaccctgga
gcttttattgcactctataatctgagagagttaaacctcagcaaaaaccccaggcttacc
taccttcatgctcacactttccgtggtctctcccaccttctctccctggatctgtctcac
tgcaatatctttgaaatccatcctcttgtattttcacacgtgttatccttggaaaacctt
gacatgggctttaataaaatgcgatacattccacaagccttcaggaagcttcagaacatc
acaaggctatctctggaaaaaaatcacatagaggcaattggaataaattcttttaaatac
caacatgcactgagagatctaaatctgagaaggaaccggatttgggtgattcaaattgat
gcctttaaccaactgaacaaattaaatgtactaaatttagggcataactctatatctcat
ttccctaatcagcttttcagtggattaatccagctcaagattatgcacctggaagccaac
aagatcggcagtgtcaactgttccttcagccggctaactaacctgaaaaaactacatcta
aacaacaaccagataacatggatcacacgcaatgcttttggctctttaaagcacgtgcag
ctacttcatcttagtaaaaataacttgacctcaatgcccagtcatttgttttccagtatg
cctaaactcagatatgttttcctttcctttaacccttggagctgtgactgtagcatgtcc
tggattgccagatggttggtatcctatgatggcatgatacagggcatgcactgcatgtat
gggctagctcaccagagtgcctcccatgtctatatgcagaatggcattatgtgcctgcag
gagggatttacagagggtgactgtgtagaaagctcagatcagttccagaatgaaaagttt
gatcagtgccacagacatataaattaccattttaggaagcaccacagcagtgtgtccttg
tatcacatgttaatgtgccccattggatggattggatggagcagcagcgtcatgctactc
aatgaggacagcaagacttcaacagaaatagtgattgctttgtgcatctaa
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