Xenopus tropicalis (tropical clawed frog): 101730425
Help
Entry
101730425 CDS
T01011
Name
(RefSeq) oocyte zinc finger protein XlCOF6.1-like isoform X1
KO
K09228
KRAB domain-containing zinc finger protein
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
101730425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
101730425
Transcription factors [BR:
xtr03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
101730425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-C2H2_6
zf-met
GAGA
zf_UBZ
zf-C2H2_8
Zn-ribbon_8
Motif
Other DBs
NCBI-GeneID:
101730425
NCBI-ProteinID:
XP_004919091
UniProt:
A0A8J0R400
LinkDB
All DBs
Position
6:complement(5018654..5024149)
Genome browser
AA seq
427 aa
AA seq
DB search
MPFPGATLGAEPHTDLSLLKREEDAVPVTGSSEAERQILHIKKEEEESDSLDQLNPLERL
TAPFTDRAGSSVTQTEISWIKIEKEELYSGDHVTPTAPFTDGDNEKLQSSDAQKIQTNME
PSTSSENCATMFPPSDCANCTQSSDLLAHTCTQPGNVTDSQTRRRRKKAYICSECGKHCK
NKYRLDRHRMVHTGEKPFTCTECGKGFRDKRYVKIHETVHTGEKPFTCTECGLSFRMKPL
LKYHQMAHTGEKPFICTECGKGFRNKNGLQRHQMAHTEEKPYTCTDCGRGFFTRSLLVSH
VRLHTGEKPFTCPECGKSFSQKSNLRTHQRVHTGFKPFSCAECGRSFVHMRALLGHQIYH
TGEKPFKCAECGLAFARRRCLIQHYNSAKNDCVGPRHHKCAECGRSFNSRSILISHQKTH
TGEKPLT
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgccgttccccggtgccacattgggtgctgagccccacactgacctgtcgctattaaag
agggaagaggatgcagttcctgtgactggttcttcagaagcagaacgacaaatattacat
ataaagaaagaggaagaagagtcagactctcttgatcaactgaacccattggaaagactg
actgctccatttactgatagggcaggctcctcagtgactcaaacagagatatcctggata
aagatagagaaagaagaactgtactcaggtgatcatgtgaccccaacagctccatttact
gatggggacaatgagaagttacagagctccgatgcccagaagatacagaccaacatggag
cccagtaccagttctgagaattgtgccactatgtttccaccatcagactgtgccaactgt
acccaaagcagtgatctcctggcccacacctgtactcagcctgggaatgttaccgacagc
cagacacgcaggaggcgaaaaaaggcttatatctgctcagagtgtggaaagcattgcaaa
aataaataccgcttagatagacatcgtatggtccatacaggggagaaacccttcacatgt
acagaatgtgggaaaggattcagagataagcgttatgtaaagatccacgagacagtccat
actggggagaaaccattcacttgtacagagtgtggactgagcttcagaatgaaacctctt
ttaaagtaccatcagatggcccacacaggggagaaaccatttatatgcacagaatgcgga
aagggcttcaggaataaaaatggtttacaaagacatcaaatggcccacacagaggagaaa
ccctacacgtgtacagattgtgggaggggtttctttacaaggagtttgctagtcagccat
gtccgacttcacacaggagaaaaaccattcacttgtccagaatgtgggaaaagcttttct
caaaaaagcaaccttcgtacccaccagagagttcacacggggtttaaacctttcagttgc
gccgaatgtgggaggagctttgtgcacatgcgggcactgttgggccaccaaatctatcac
acaggggagaaaccttttaaatgtgccgaatgtggtttagcctttgcaagaaggcgctgc
ctcatacaacactataacagtgctaagaatgattgcgttgggcccaggcatcacaaatgt
gccgaatgtggcagaagctttaactctaggtccatcctgataagccaccagaaaacccac
acaggggagaaaccattgacatga
DBGET
integrated database retrieval system
