Xenopus tropicalis (tropical clawed frog): 101730558
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Entry
101730558 CDS
T01011
Symbol
tubb1
Name
(RefSeq) tubulin beta-1 chain isoform X1
KO
K07375
tubulin beta
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04145
Phagosome
xtr04540
Gap junction
xtr04814
Motor proteins
xtr05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
101730558 (tubb1)
09144 Cellular community - eukaryotes
04540 Gap junction
101730558 (tubb1)
09142 Cell motility
04814 Motor proteins
101730558 (tubb1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
101730558 (tubb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xtr03036
]
101730558 (tubb1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xtr04812
]
101730558 (tubb1)
04147 Exosome [BR:
xtr04147
]
101730558 (tubb1)
Chromosome and associated proteins [BR:
xtr03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
101730558 (tubb1)
Cytoskeleton proteins [BR:
xtr04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
101730558 (tubb1)
Exosome [BR:
xtr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
101730558 (tubb1)
Exosomal proteins of colorectal cancer cells
101730558 (tubb1)
Exosomal proteins of bladder cancer cells
101730558 (tubb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Misat_Tub_SegII
Tubulin_2
Tubulin_3
Motif
Other DBs
NCBI-GeneID:
101730558
NCBI-ProteinID:
XP_031750537
UniProt:
A0A803JKJ4
LinkDB
All DBs
Position
10:3081489..3088283
Genome browser
AA seq
458 aa
AA seq
DB search
MREIVHLQIGQCGNQIGSKFWEVISDEHGINNQGSYHGDSAVQLERINVYFNEAHSHKYV
PRAVLVDLEPGTMDSLRSSSIGPLFRPDSFIHGNSGAGNNWAKGHYTEGAELIESVMDVV
RTESESCDCLQGFQLVHSLGGGTGSGMGTLLINKIREEYPDRIMNTFSIMPSPKVSDTVV
EPYNAILSIHQLIENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSMTMSGVTTSL
RFPGQLNADLRKLAVNMVPFPRLHFFMTGCAPLTSRRSQQYKALTVPELTQQMFDARTMM
TACDPHHGRYLTVAGIFRGQMSTKEVDEQMLSVQSKNSAYFVEWIPNNVKVAVCDIPPRG
LKLASTFIGNNTAIQEIFRRIADQFSAMYRRKAFLHWYTGEGMDEMEFTEAECNTHDLIA
EYQQYQEATAEMEEYFEEEEEEVVEGIRITETIEKVIK
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgaaatagtccatctacaaataggccaatgtggcaaccagattggctcaaagttc
tgggaagtgatcagcgatgaacatgggatcaataaccagggcagttaccatggagactcg
gcggtacagctggagaggatcaacgtctacttcaacgaggcccattcccacaagtacgtg
cccagagccgtgttggtggatctggaacccgggaccatggacagtctccgctccagcagc
atcggacctctgttccgccccgacagctttatccatggaaattctggcgctgggaacaac
tgggccaagggccactacacagaaggagcagagctgatcgaatcggtaatggatgtggtg
agaacggaaagcgaaagctgcgactgtctgcaagggttccagctggtccattcccttggg
gggggcaccggttccgggatgggcacgctgctcattaataagatccgggaggagtacccc
gacaggatcatgaacacgttcagcatcatgccctcgcccaaggtctccgacacggtggtg
gagccgtacaacgccatcctgtccatccaccagttgatagagaacacggacgagaccttc
tgcatcgataacgaagccctgtacgacatctgcttccgcaccctgaagttgaccaccccg
acctacggagacctcaatcatttggtttccatgacgatgagcggggtgaccacatctctt
cgcttccccgggcagctcaacgccgatctgaggaagttagcggtcaacatggtgcccttt
ccgcgcctccatttctttatgacgggctgcgctcccctgacatctcgccgaagccaacag
tacaaggcgctgaccgtgcccgagctcacccagcagatgtttgacgccaggaccatgatg
accgcctgtgacccccaccatggccgctacctgaccgtggccggtatcttccggggtcag
atgtccaccaaagaagtggacgagcaaatgctatcggtgcagtccaagaacagcgcctac
tttgtagagtggatcccgaacaacgtcaaggtggccgtctgcgacatcccaccccgcggc
ctcaagctggcgtccacgttcatcggcaacaacacggccattcaggagatcttcaggcgg
atcgccgaccagttctcggctatgtaccgccggaaagcgttcctgcactggtacaccggc
gagggcatggacgagatggagtttaccgaagccgagtgcaacacccacgacctcattgcc
gaataccaacagtaccaggaggccacggccgaaatggaagaatacttcgaagaggaggag
gaggaagtggttgaaggaatacggatcacagaaacgatagagaaagtcatcaagtag
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