Xenopus tropicalis (tropical clawed frog): 101730566
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Entry
101730566 CDS
T01011
Symbol
nphp4
Name
(RefSeq) LOW QUALITY PROTEIN: nephrocystin-4
KO
K16478
nephrocystin-4
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
xtr03037
]
101730566 (nphp4)
Cilium and associated proteins [BR:
xtr03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
101730566 (nphp4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LMBR1
Bacillus_HBL
DUF2205
GnHR_trans
Tnp_22_dsRBD
AICARFT_IMPCHas
DUF4715
Motif
Other DBs
NCBI-GeneID:
101730566
NCBI-ProteinID:
XP_031762377
UniProt:
A0A8J1JWV7
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All DBs
Position
7:98063706..98120029
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AA seq
1030 aa
AA seq
DB search
MPTENDVSPLCLKPSKLIQAFFRAFRSMKVHEINEVAEVVDPSNPVNFNLQREEVDYLLC
NEIVLQFLAFTSYYWLPMGTTPLDIIDCSPGYQIKYRVDPGFLKPGERKLFLRYLALQTL
QIDIWDGESLLLIGSAAVEMKKIKTISAWHIIYVWGGAWLAVCLHGRTLAELRGQIHPDN
TVHPVNKMKKQGKTPAQTAKLKQSKIAKDLEEPTEYFDNNTELRVKSKMAPARKRMLDKD
TESQQELSESESDCEEDIRSYLKCLPSKAEIKNMLQELTTAIRDEMRDLKKDVISLSART
DTMEKNHEKLIKHNTYLHKTVHNQAEKIDELERQMEDFENRSRRINIRIRGIPETVSQGE
LKGSLQQIFNNILSKDLNNEIKMDRYHRVAKTKNAPPDSPRDVLCALHDYTTKETILMKA
REMKNITFEDSRIILFQDLSWRTLNKRRQLKPLTDLLKEKGIQFKWGFPFSLSVRNNGQL
FILRNPKDTDDFCKRLDIERIALPGWDIIPSSDANIPKATEFWKHNVCQAQKLADLDSEL
AAMLCSRMKEVGIAYQQTNSETNTIERRKKERMMAVRQQESQENAYLRKSLILAQHEERT
QHTRDLQIIEAYRERTKPECISSMLNQAITSNYTVYATLGTAEFFEFELKNPYKIANTLS
ITSNFKMFYFSCILGFVLNSMVSFKTSDGKVIAILQVSIEPQPHVVDQTFRFYHXELTFL
KKSIRLPPWYTLPGAPVGTPGGEPDLHVCCSDINIICDSKKWRLSSVMFAEKGPGEPQDV
FIKVAGGPSPQIXFFIALYIDPWLAAPIQIWQIYVHSLKRIDVSCITGQLTQLSLVLRGT
QVVRKVRSYSSHPEELKVDPDRGFVFPPNGIQDLHIGVRPQKAGSKFIYLNLVDVDQHQL
VASWLVCVSCRKPVISKAFEILLPVGGEKGSNKRISYRNPYPTKKTYSLHKNRIDLPQFK
ENYCILRTSSSKECESPRLHTFSPWLVCDRETYSIGLCFAPSQTRGLEEILIFINNREDK
NEETFHVKVR
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgcctacagaaaatgatgtcagcccactgtgcctaaaaccatccaagctaatccaagct
ttcttcagagctttcagaagcatgaaggttcatgaaattaatgaagttgcagaagtggtt
gatccatcaaacccagtgaactttaatcttcagagggaagaagtggattatcttctatgt
aatgaaattgttctgcagttcctcgctttcaccagttattattggctgcccatgggcaca
acacccttagatatcattgattgttctcctggttatcaaatcaagtacagagttgatcct
ggatttctgaagccaggtgaacggaaattgtttttacgttatttggctctccagacattg
caaattgacatttgggatggagaatctttgcttctaataggatcagctgcagtggaaatg
aagaaaattaaaaccatctctgcttggcacataatatatgtttgggggggggcgtggctt
gctgtctgcctgcatggtcgcacactagcagagctccgtggccagattcaccctgacaac
acagtacaccctgttaacaaaatgaaaaagcaaggtaagacacctgcacaaacggctaaa
ctaaaacaaagtaaaatcgctaaagatttagaagaacctaccgagtattttgataataat
actgagctgcgtgtaaaatccaagatggcgcccgctcgaaaacgcatgctagataaagac
acagaaagtcagcaagaactttcagagtcagaaagcgattgtgaggaagacataagatct
tacctaaaatgcttaccatctaaagcagaaattaaaaatatgttgcaggaacttaccaca
gccataagagatgaaatgagagatctcaaaaaagatgtaataagcctaagtgctagaact
gacactatggaaaaaaaccatgaaaaactgatcaaacacaatacctatttacacaaaact
gtacataatcaagctgaaaaaatagatgagcttgaaagacaaatggaggattttgaaaat
agaagcagaaggataaacataagaataagaggaatcccagaaacagtttcacagggagaa
ctcaaagggtcactacagcaaatctttaataacatccttagtaaagatctaaacaacgaa
ataaaaatggacagataccacagagtggcaaaaacaaaaaatgctcctccagattctcca
agagacgttttatgtgcattacatgactatactactaaggaaaccattctgatgaaagca
agagaaatgaaaaacattacatttgaagatagcagaattatacttttccaggatctatca
tggagaacactaaacaagagaagacaactaaaaccactcacggatctactaaaagaaaaa
ggaatacaattcaaatggggatttccattcagcctttcagtaagaaataatggccagctt
tttatcctaagaaatccaaaagacactgatgacttctgtaaaagattggacattgagaga
atcgcactacctggatgggacattataccatcatcagacgctaatattcctaaagcaaca
gaattttggaaacacaatgtttgccaggctcagaagttggctgacttggatagtgaactg
gcagccatgttatgcagtcggatgaaagaggttggcatagcatatcagcaaacaaacagt
gagacgaacacaatagaaagacggaaaaaagagaggatgatggcagtgagacagcaggag
tcacaagagaatgcttatctaagaaaatctcttattctggctcaacatgaggagcgtact
cagcacacgagagatttgcagatcattgaagcatacagagaacgcaccaaaccagagtgt
atctctagtatgctgaatcaggccattacctcaaattacactgtctatgctacactgggc
actgcagagttctttgaatttgaactaaaaaatccttacaaaatagccaatacactatca
ataactagcaatttcaaaatgttctatttctcatgcattttgggatttgtgctaaatagc
atggtttctttcaagacatcagatggaaaagtcattgctattctccaagtgagcattgaa
cctcagccacatgttgttgatcagacatttcgattttatcacncagaactgacatttctg
aaaaagtccattcgtttgcctccgtggtacacacttccaggtgctccagttggtacacct
ggtggggaacctgatcttcacgtgtgctgtagtgacatcaatattatctgtgattccaaa
aaatggagattaagtagcgtaatgtttgctgaaaagggtccaggagagcctcaggatgtg
tttataaaagttgctggaggacccagcccacaaatcnnattcttcattgcactttacata
gatccttggcttgcggctcctattcagatctggcaaatttatgtgcactcactaaagaga
atagatgttagttgcataactggccagctgacccagctgtctcttgtccttcgaggaact
caagtggtacggaaagtcagatcttacagttcacatccagaggaactaaaggttgatcca
gacaggggatttgtgtttcctccaaatggaatacaagatcttcacattggtgtgcgccct
cagaaagcaggcagcaaatttatttacctcaatttagtagatgtggatcagcatcaactc
gtagcatcctggctggtttgtgtgtcttgcaggaagcctgttatttccaaggcttttgaa
attctacttccggttggtggagaaaaaggttctaacaagagaatttcatacagaaaccca
tatccaactaagaaaacatattctcttcacaaaaacagaattgatctcccgcaattcaaa
gaaaattactgtattttgagaacaagctcttctaaggaatgcgaatctcctaggttgcat
acattttctccatggctggtctgtgacagagaaacctacagtattggcctgtgttttgca
ccaagtcagaccagaggcctggaagaaatactgattttcatcaataaccgagaagacaaa
aatgaagagacattccatgtaaaagtcagatag
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