Xenopus tropicalis (tropical clawed frog): 101730579
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Entry
101730579 CDS
T01011
Symbol
nlrc5
Name
(RefSeq) protein NLRC5 isoform X3
KO
K22615
NLR family CARD domain containing 5
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
xtr04054
]
101730579 (nlrc5)
Pattern recognition receptors [BR:
xtr04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
101730579 (nlrc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_6
NACHT
NLRC4_HD2
LRR_4
Atypical_Card
LRR_8
nSTAND3
NOD2_WH
LRR_NXF1-5
AAA_16
AAA
NPHP3_N
Mg_chelatase
AAA_7
AAA_5
AAA_19
zf-C2H2_aberr
TsaE
AAA_22
AAA_25
Motif
Other DBs
NCBI-GeneID:
101730579
NCBI-ProteinID:
XP_017948978
UniProt:
A0A8J0T0E0
LinkDB
All DBs
Position
4:complement(51438876..51538539)
Genome browser
AA seq
1793 aa
AA seq
DB search
MYKMEGAEFHDVIANFLPRLEDYFCSDLAYFLQKIDVFLPNVDFSHIIQLPDIKMKVSSL
LRELLVRHTESLKNIIQSVCMDGVLPMDLEVELISMIGEGGEEETTDCWLSSEIAGIKRQ
KIDLIGRFKEKITNSLLQKYHFKSKEESSQDVRQMFVEPLIHKDDRTLKEKLKAKSDSGV
PSGTEEITDSMKILNLFEKHSTLETHTVLLVGMPGTGKTMLTRRICYEWATRELSQFTLT
FLFEFRQLNLIHRYVTLKELLFNLFLKPDGNPEEVYQYIIENPQHILIMFDGLDEFIGQI
SHDPPQVNPEADKPVSISELFTCLLHGVILSGCTVVVTCRSKILNNIPLKTIDLVAEVLG
FNQGRVEKYVKLFFCNDYLREKVLLHLRENTKLMHMCFVPALCHIVCICLEYLLQAPSSA
QLPQTITQFYVVMLNIFIAKEQKSSKTEKALLKKFKPLITELCDLALKGLDEKKTVFYVE
DISKGLQGFAPCHGLLSVFDVKNIDSSNDTGYSFIHLSSQEFFAALYLMISRTVTEAALN
KKLSLKSKWNLKSKTKNEITENFHIFLSGLSSKECQSFLYDLAEQSEAFVQKKQQTIIEC
LVKLAETQLTGPKLIELCHCTYETQDLDLARRIGEHLKSKYELRNFRIAPVDMTALSFIV
NHGTCLVCLDFAGCPMELDCLDVLGKCKNLNSLSFRNKKYGDSFAQALSKNIAGMKTLQN
LRLIAGRLTAVGAASLIQSFLDCPELKEISLQDNRLKTEDMNMFLELFFKMKQLKKLDLS
KNDINVSGVLALAKVAAKCHNITDINIRCDNSTAIFLSESTLPSSRPALSEDTLRKKKIS
LTHCDLTSSDIQHVVQILQDLSQISDINLSDNPLGDVGCMELVNSLPGIEISGQLSLHRT
KLSVEGLCYLVSSMVSCPRVEKVDIRFLQQTADIHFLPQCATEHREIRIIGSRHLDKVFE
KLCSIFQKCSHLTSLDLSENNLENSGIKRITEVLPDLKSLRFLNLNGNKISMDGVIYLVK
SFNSIDNMTDVSISFVGTQKVEVTFQDKESHKSLMTSAKGAAELPELSKTFSLTECRITV
QMLKKLFRALEPCIELTKINLSNNSLSYQMIENLLTYLPVFPNLTLLNISNNDLSPNSVL
LLVNSVNLCNRIKEVDIRSSENMCLHLEKQHKANEVIYRLTNCKIGRNDFEGLMKVFRRI
ENLTEVNMRINNIMEEGILEMLIFLINFRTVTKIDACSQPKDAVHLMFAPDKDLPKKMRL
AEFSFQADHLRKICYLLEGFSNLTQFISKNININLDVLGDFLGVLARKSHDFIISIDEQW
VRGQNVISLIDKITKMCANVGAIHICINKVKIELKGSGNYQRSSVTCFKELVSVRLNHCE
LEKQHVPLLSSIIMQCTNLLELDFSHNRMGDEGIHIFSDLLVSLPLLNTILLESVSMSYV
GIFYITESLRNCRSLHSINLSGNNIGEEGAIALANLLPEKRNLRFINVSHCFSVTCDGGR
RFIQELTKCPAVQEIYLDSVELDHTSLLMLFQGMLQMPLLQILSLSCSPIKDVGAEILSA
VLPSMKNLREINLSQTKIGPLGALTVAKALGSCGSVEKLLLAENKFENEAADQLAVALPV
MRSLKVLNVQSCSLGANESSAFLTALVSCQQIEDICLSGNIFGETCLLEFAKRLQHFTQL
RKINLKFCKISDSVSRSLAVGFGGCKNLEEIILSWNSIGDSGSFALAQALKGMRKLKKLD
LERNQITEQGAEAIAQVLSGCTGIKVICLWSNQIPKTIEEKLHNEDSRLNFSF
NT seq
5382 nt
NT seq
+upstream
nt +downstream
nt
atgtataaaatggagggagcggaatttcatgatgtcatagctaattttttgcccaggttg
gaggattatttttgcagtgatttggcctattttctgcaaaaaatagatgtttttctaccc
aatgttgattttagccacattattcagttaccggatatcaaaatgaaagtatcctcactt
ctccgtgaattgttggtgaggcacaccgagagtttaaagaacattatacagagtgtttgc
atggatggtgtcctaccaatggacctggaggtagaactaataagcatgataggggaagga
ggggaagaagagactactgattgttggctttccagtgaaattgcaggaattaaacgacag
aaaatagatttaattggaagattcaaagagaaaataaccaattctttgttacagaagtat
catttcaaatctaaggaagaatccagtcaagatgttaggcagatgtttgttgagccatta
atccataaagatgacaggactctaaaagaaaagctgaaagctaaaagtgactcaggggta
ccttctggcacagaagaaattactgatagtatgaaaatactgaatctgtttgaaaagcac
agtaccttggaaacacatactgttttacttgtggggatgccaggtactggtaaaaccatg
ctaacacgacggatctgctatgaatgggcaacgagggaactcagtcaatttacattaaca
tttctttttgaatttcgacagctaaacttaatacatagatatgtgactcttaaagaactt
ttgttcaatttgttcctcaaacctgatggaaatccagaggaagtgtatcaatatatcatt
gaaaatccacaacatatccttatcatgtttgatgggcttgatgaatttattggccagatt
tcacatgatcctcctcaagtaaaccctgaagctgataagccagtgtccatctcagagcta
ttcacttgtctcttacatggtgtgattttatctgggtgcactgttgtggtcacctgcagg
tcaaaaatattaaacaacatccccctgaaaaccattgaccttgttgcggaagttttaggg
tttaatcagggaagagttgagaaatatgtaaaattattcttctgcaatgattatcttagg
gagaaagttttattacatttaagagaaaacactaaactcatgcacatgtgctttgtacca
gcgttatgccatatagtatgcatttgtttggaatatttactacaagctccttcgagtgca
caacttcctcaaacaataacacagttttatgtggtaatgctgaatatttttattgcaaaa
gagcaaaaatcttccaaaacagaaaaagctctgctcaagaaatttaagccattgatcacc
gaattatgtgatcttgcccttaaaggacttgatgaaaaaaagacagtgttttatgttgag
gatatttcaaaaggcttgcagggttttgccccctgccacggcctactttctgtttttgat
gttaagaacattgacagcagcaacgataccgggtactcctttattcatctaagctcgcaa
gagttttttgctgctttatacctaatgataagccgcacagtgacagaggctgcacttaat
aaaaaactctctcttaagtcaaagtggaatttgaagtctaaaacaaaaaatgaaatcaca
gaaaacttccatatatttttgtctgggttgtcatccaaagaatgccagtcatttctgtac
gacttagcggaacagagcgaggcgtttgttcaaaagaaacagcaaactatcattgaatgt
cttgtaaagctggcagagacccaacttacagggccaaagcttattgaactatgtcactgt
acatatgaaacacaagatctggatcttgcccgacgtattggggaacaccttaagtcaaag
tatgaactgagaaacttcaggatagcaccagtggatatgacagctttaagttttattgtc
aaccatggaacgtgcttggtttgtttggattttgcagggtgcccaatggagttggattgc
ttagatgttcttggcaaatgcaaaaatttaaatagtttaagtttcagaaacaaaaaatat
ggagattcatttgctcaagcactttccaaaaacatagctggcatgaaaaccttacaaaac
ctcagattgattgctggacggcttacagctgtgggggctgcttcgcttattcagtcattc
ctcgattgtccagaacttaaagagatcagtttgcaagataaccgcctaaagacagaagat
atgaatatgtttcttgaattattttttaagatgaaacagttaaaaaaacttgacttgagt
aaaaatgatattaatgtcagtggtgtgcttgctttggcaaaggtagctgcaaagtgccac
aacatcacagatattaacataaggtgtgataattctacagccatctttttatcagaaagt
accctaccatcaagtaggcctgcactgtctgaagacacactaagaaagaagaaaataagc
cttacacactgtgacctgacttcatctgacatacagcatgttgtacagattctccaagac
ctctcacagatctcagatatcaatttatcagataatcctcttggagacgttggctgtatg
gagctagttaacagcttaccaggaatagagatttctggccagttgagtcttcacaggacc
aagttatctgttgaaggcctgtgttacctggtcagctctatggtctcttgtccaagagta
gaaaaagtggacatcaggtttctacagcagactgcagacattcatttcctaccacagtgt
gctacagaacacagagagatcaggataattggcagtcgacatcttgataaagtttttgag
aaactttgctctatattccaaaagtgcagccatttaacaagcctggacttgtctgaaaac
aacttggaaaattctgggatcaagcgcataacagaggttctccctgatctaaaaagtctg
cgttttcttaatttgaatggaaataaaatctccatggatggagtgatttaccttgtgaag
tcttttaattccatagacaacatgacagatgtttcaattagttttgtgggaacccagaaa
gtggaagttacttttcaggataaggagagtcataaaagcctcatgacttctgctaaagga
gcagctgaattgcctgagttgtccaaaacattcagcctcacagaatgtcgcataactgtc
cagatgttgaagaagctttttcgtgctctagaaccatgcatagagctcaccaagatcaac
ctgtccaacaattcattaagttaccagatgattgaaaaccttctcacatacttgccagtg
ttccccaatctgacacttctaaacatcagtaataatgacctgtctccaaactctgtttta
ctgctggttaattcagtaaatctttgtaaccgaattaaagaagttgatatcaggtcctca
gaaaacatgtgcttgcatttagagaaacaacataaagccaatgaagtcatctacaggttg
accaactgtaaaattggcaggaatgactttgaagggcttatgaaagtattcagaaggatt
gagaacttgactgaagtgaacatgcgaattaataatatcatggaagaaggaatccttgag
atgcttatctttctgatcaatttcaggactgttactaaaattgatgcctgttcacagcca
aaagatgcagtccacctcatgtttgcccctgataaggacttaccgaagaaaatgaggtta
gcagagttcagttttcaagccgatcaccttcggaaaatctgttatttacttgaagggttc
agcaatctcacacaattcatatcaaagaacatcaacattaaccttgatgtcctgggggac
ttcctaggagtccttgcaagaaagtcccatgattttatcataagtattgatgaacagtgg
gtgagaggacagaatgttatttcactgatagataaaattactaagatgtgtgccaatgtt
ggagcaattcacatatgcataaacaaagtgaaaatagagttaaaaggaagtggaaactac
cagagaagttctgttacatgttttaaagagctggtgtcagtaaggcttaatcactgtgaa
ctggaaaaacaacatgtcccactcctcagttcaataataatgcaatgtacaaacctcttg
gaactggatttctcacataaccgtatgggggatgaagggatccatatattttctgatttg
ctggtttcacttcccctactgaatactattttgttagaatctgtaagtatgtcatatgtt
ggcatattctacattactgaaagtctaaggaactgcagatctcttcatagtatcaattta
tcaggaaataatattggggaggagggggcaattgctttggcaaatctgctgcctgagaaa
aggaatctccgcttcataaacgtctcacattgtttttctgtaacttgtgatggaggacgt
cgatttatccaggaacttacaaaatgccccgcagtacaagagatatatttagattcggtg
gaacttgatcatacatctcttctgatgttatttcaaggcatgctacaaatgcctttattg
caaatattgagtttaagctgcagtcccattaaggatgtcggagctgaaatactttctgca
gttttacccagcatgaagaacttaagagaaatcaacctttctcagaccaagattggccct
ttgggagcattaacagttgcaaaagcgctaggaagctgtgggtctgtggaaaaattactt
ttagcagaaaataagtttgaaaatgaagctgcagatcagctagcagtggcgttaccagtg
atgcgctctctaaaggtcctgaacgtgcagtcctgcagtctgggagcaaatgaaagcagt
gcattcttgacggctttggtatcttgccagcagatagaagacatttgtctctcaggaaac
atatttggggaaacatgtctactggagtttgccaaaagacttcaacattttacccaactt
aggaagattaacttgaagttttgtaaaatatccgacagcgtttccagatccctggcggtt
ggctttggaggctgtaaaaaccttgaagaaatcatattatcatggaacagcattggtgat
agtggatcgtttgccctggcccaggctttaaaaggaatgagaaaactaaagaagttggat
ctagagagaaaccagattactgaacaaggggccgaggcaatagctcaagttctgagcggc
tgtactgggataaaagtaatctgtttatggagcaatcaaattccaaagaccattgaagag
aaactacataatgaagattcaagactaaatttctctttttga
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integrated database retrieval system
