Xenopus tropicalis (tropical clawed frog): 101731206
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Entry
101731206 CDS
T01011
Symbol
cspg5
Name
(RefSeq) chondroitin sulfate proteoglycan 5 isoform X1
KO
K08116
chondroitin sulfate proteoglycan 5
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
xtr00535
]
101731206 (cspg5)
Proteoglycans [BR:
xtr00535
]
Cell surface proteoglycans
Others
101731206 (cspg5)
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Gene cluster
GFIT
Motif
Pfam:
Neural_ProG_Cyt
Chon_Sulph_att
Reovirus_L2_MT2
Motif
Other DBs
NCBI-GeneID:
101731206
NCBI-ProteinID:
XP_031759656
Xenbase:
XB-GENE-22068312
UniProt:
A0A803JXD8
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Position
6:complement(7027968..7072722)
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AA seq
719 aa
AA seq
DB search
MDSRLRCWSLAALLCPLLLLLRAEPQTGTGTENLGPEADNSYSQPAAGISEGVVAGVKAV
ERELKSGGEDFVGGRSPWSPTTAGKSQENLSTEAEGFAGRATGSPVATTDSPYTPHPSGP
ATGNNKSSTCADCRGEDIDRKPPVRSLLAQSNGEEEEEPVTGMVWPFSREALDLEIRKRL
LKSGIVSATESQEDAGSGDRGQGQQGAYESPPGKDWDLGEFLDKTTASPSQATVTPSKGL
VNPTAKAISPDSAEIDHLLQVSRETVLQSPSSSDTDPHGQGGQRPEKAPELVPEGATNPL
AAQGAQGGTDVAMVTDKTESPVGPSVAPVGQDKASEAPPDHAVDDLINFDYYDLFNIDGH
GGLGRFPGSSVPGGDSTKKKHDKKVPWPMPELYDDFTPFDESDFYPTTSFYADGDDDGGI
EDDDDDDDIEDTDDIDDDDTGARDVANVPKAATLTPKVQTAMVDEKPTGRQHNPHQTFIL
YGGDGHPKFHPDSSKDLSQAGMNDSGGTGGECRNGYVRRNNSCRSLCDIYPTYCYNGGQC
YIVENTGAFCRCNTQDYIWHKGIRCESIVTDFQVMCVAVGTAALVVLLLFMMTVFFAKKL
YLLKTENYKLRKRNRYRTPSELHNDNFSLSTIAEGSHPNVRKLCDTPSNLSPHARALAYY
DNVICQEDPNAPQKVQDLPKACLKDEEPFNIQNSLSPKHDSGKGDPDIADVNCVLNNLT
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atggattcccgcctgagatgctggagcctggcagccctgctgtgccctctcctcctcctc
ctccgggcagaacctcaaactggaacagggacggagaaccttggcccagaggcggataat
tcctacagccaaccagccgcaggcatttccgagggggtcgtggcgggtgtaaaagcggtg
gagagagaattaaagtctggtggagaagactttgtaggtgggagaagtccttggagtcca
accacggctggaaagtcacaggagaacctttcaactgaagcagagggctttgctggaagg
gcaacaggtagcccagtggccactacagacagcccttataccccccatcccagtgggccg
gctactgggaacaataagtcatcaacctgtgccgactgcaggggggaagacattgatcgg
aagccgccggtgaggtccttgctggcacagagcaatggggaggaggaggaggaacccgtt
accggaatggtttggccctttagccgggaagctttggacttggaaattagaaagagatta
ctgaaaagcggaattgtttcagccacagaaagccaagaggatgctgggagtggagaccga
gggcaaggtcagcagggggcgtacgagagccccccggggaaagactgggatttgggggag
tttttggacaagacgactgcctctccctcccaggcaactgttacgcccagcaaggggctt
gtcaatccaacggccaaagccatcagccccgactcggccgaaatcgaccatctcctccaa
gtgtccagggaaaccgttctccagtctccttcatcttcagatactgacccccacggccaa
ggcggccaaagaccagaaaaggctccagaattggttccagagggagcgaccaatccgttg
gctgcacagggagctcaggggggcacagacgtcgccatggttactgataaaacagaaagt
cccgttggccccagtgtggcaccggtcggccaagacaaggcctcggaggcccccccagat
cacgccgtcgatgaccttatcaactttgactactacgacctgttcaatatagacggacac
ggtggtctcggccgcttccccggttcctccgtccccggcggggactccaccaagaagaaa
cacgacaagaaggttccgtggccaatgccggaactttacgacgattttacgccctttgac
gaatctgatttctacccaacgacgtctttctacgcggacggagatgacgatgggggaatc
gaggacgacgacgatgacgatgatatcgaggatacggacgacatagacgatgacgatact
ggggcgagggatgtggccaatgtgcccaaagccgccactcttacgccaaaggtacagacg
gcgatggtggacgagaagccgacgggaaggcaacacaatccgcatcaaacctttatcctg
tacgggggggacgggcaccccaagttccacccagacagcagtaaggatttgtctcaggcg
ggaatgaacgacagcggcggcaccggcggggagtgcaggaatggatacgtgcggcgcaac
aactcctgcaggtctctgtgcgacatctaccccacctactgctacaacggggggcagtgc
tacattgtggagaatacgggggcattttgcaggtgcaacacacaggactacatttggcac
aagggcatacgctgcgagtccatcgtgacggatttccaggtgatgtgcgtggcggttggc
acggcggcgctggtggtcctcctcctcttcatgatgaccgtcttctttgccaagaagctc
tacctgcttaaaactgagaactacaaactgaggaaaagaaacaggtacaggactccttcc
gagctccacaacgataacttttctctgtccaccattgccgaaggctcgcacccaaatgta
aggaaactatgcgacactccatctaacctctccccccatgcccgcgcattggcttactat
gataacgttatttgtcaggaggaccccaatgccccccagaaggtgcaggatctccccaaa
gcctgcctgaaggatgaggagccattcaacatccaaaattctctctctcccaagcacgac
agcggcaaaggggaccccgatattgcggacgttaactgcgtcctgaacaacttgacatga
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