Xenopus tropicalis (tropical clawed frog): 101731232
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Entry
101731232 CDS
T01011
Name
(RefSeq) zinc finger protein Xfin-like
KO
K09228
KRAB domain-containing zinc finger protein
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
101731232
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
101731232
Transcription factors [BR:
xtr03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
101731232
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_6
zf-C2H2_jaz
KRAB
C1_4
zf-H2C2_5
Zn-ribbon_8
zf-C2HC_2
zinc_ribbon_9
Motif
Other DBs
NCBI-GeneID:
101731232
NCBI-ProteinID:
XP_004919616
UniProt:
A0A803KFW8
LinkDB
All DBs
Position
6:complement(6583674..6610802)
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AA seq
1375 aa
AA seq
DB search
MAGPLAPLQVAPTFDDVAVYFSWSEWESLSPSQRDMYKSVMAENYECVLSLGYPIGKPEI
VSKIEAGEDLWSRSDARPERKEKDGETPKDSDWAAEDYKEVLYLGTLAAVKSEPVEEPVV
EGSNSAKKSHICSHCGKLFSCYAAAARHQRMHRLQKAHQCPHCKKGFVQKSDLIKHHRTH
TGERPYQCAECQKNFTERSALVNHQRTHTGERPYRCPDCLKSFNQRSALTKHRRTHTGER
PYHCSVCAKSFIQNSDLVKHVRTHTGEKPYECPLCGKRFAESSALMKHKRTHNAQRPFRC
SECSRSFAQNSDLAAHMRKHTESQNVPDPDSVVGTGPLSSQNEVITAAESPFSCAKCRKT
FKQWTSLLNHQQAHCGEKPYLCSYCNKGFVQNSDLVKHLRTHTGERPYQCADCHKGFIQK
SDLVKHLRTHTGEKPFKCTHCDKKFTEKSALAKHQRTHTGEKPYKCSTCEKAFTQRSNLI
LHQRIHTGERPYKCTTCLRSFIQNSDLVKHQKVHTRSSLSDPRAPAVTSPYQCSECDRTF
SHWSTFMKHSKLHSGEKFQCMECKKGFVQKSDLVKHLRVHTGEKPFKCLVCKKSFSQKSD
LHKHWRIHTGEKPFPCHTCDKSFTERSALIKHHRTHTGERPHKCSVCEKGFIQKSALTKH
MRSHTGEKPYACAQCGKSFIQNSDLVKHQRIHTGEKPYHCTECNKCFTEGSSLVKHRRTH
SGEKPYPCTQCEKTFTQSSDLVKHTMVHNGDTPPAATAFHEILIKQETGSEGLRSRLVSY
PCPECDKVFCQRPALVKHQRTHKAEKRYPCNECDKSFFQTSDLVKHLRTHTGERPYHCSE
CNKGFIQNSDLVKHQRTHTGERPYTCAECNKGFVQRSALTKHMRTHTGEKPYKCEQCQKC
FIQNSDLVKHQRIHTGEKPYHCPDCGKRFTEGSSLIKHQRIHSRIKPYPCNVCGKSFSQS
CNLLKHLKCHSEQNPPVVLGSGPGLVSKTQPDPPDNMVYGDTAENTNYVSPEAARERLFK
CNDCGKCFAHRSVLIKHIRIHTGERPYKCTQCARSFIQKSDLVKHYRTHTGERPYKCGLC
ERSFVEKSALSRHQRVHNNKSPVPDSAAEQHQVTYWGESEDDPKSLVPQLHVVKEEDPRV
MYGPLSLLQSCCPPAIKAKLTPPYMCSECGKSFTHRSVFLKHWRSHTGEQPYTCKECGKG
FSQSSALVKHVRIHTGERPYACPTCGKSFIQNSDLAKHQRIHTGEKPYRCTTCGKKFIDR
SSVVKHSRTHTGERPYPCKECGKGFVQRSDLVKHTRTHTGEKPYACNGCERSFSTHSASV
RHQRLCNMGRPCRYQNSLFYSADITWQEQYAELVQVPMNSEEPMNAIGWISEVVL
NT seq
4128 nt
NT seq
+upstream
nt +downstream
nt
atggccgggccgctggcccctctacaggtggcgccgacgttcgatgacgttgcggtttat
ttctcgtggagcgagtgggaaagcctgagcccctcccagagggacatgtacaagagcgtc
atggcggagaactacgaatgcgtgctttccctgggttatccaatcggaaagccagaaatt
gtatcaaagatcgaggcgggagaagatctgtggtcgaggagcgatgcccgtcccgaacgc
aaggagaaggacggtgaaacgcccaaggattctgattgggcagcagaggactataaggag
gtgctgtacctcggtactttggccgcagtaaagtcggagccggtggaggagcctgtggtg
gagggaagcaactcggccaagaagagccacatctgcagccattgcggcaagctgtttagc
tgctatgcagccgcggcccggcaccaaaggatgcacagactgcagaaggcgcatcagtgt
ccccactgcaaaaagggcttcgtgcagaagtcggatctcattaagcaccataggacccac
accggagagaggccgtatcagtgcgcagagtgccagaagaatttcaccgagcgctcggcc
ctcgtcaaccaccagaggacgcatacgggcgagagaccttacaggtgcccggactgtctg
aaaagctttaatcagagatcggcgctaaccaagcaccgccggacgcacacaggggagagg
ccgtatcactgctcggtgtgtgccaagagcttcatccagaactcggacctggtgaaacac
gtaaggacgcacaccggggagaaaccgtacgaatgccctctgtgcggcaaaaggtttgcc
gagagctcggctttgatgaagcacaagaggacgcacaatgcccaaagaccctttaggtgc
tccgagtgcagcagaagtttcgcccaaaattctgatctcgccgcgcatatgagaaaacat
acagagtcccaaaacgttccagatccagactcggtagtcggaactggcccattaagctcc
cagaatgaggtgataacagctgcagagagtccgttctcctgtgccaaatgcaggaagaca
ttcaagcagtggacatctttgctcaaccaccagcaggcgcactgcggggagaaaccctat
ctgtgctcctactgcaacaaaggcttcgttcagaactccgacttggtgaagcacttgcgc
acccacaccggggagaggccgtatcagtgtgccgactgccacaaaggcttcatccagaaa
tctgacctcgtcaaacacttaagaactcacacaggggagaaacccttcaaatgcacccac
tgcgacaaaaaattcacagagaaatccgctctggctaagcatcaaaggactcacactggg
gagaaaccatacaagtgcagcacctgcgagaaagccttcactcaacgctcaaacctcatc
ttgcaccagaggatccacaccggcgagcggccttataaatgcaccacgtgtctccgaagt
ttcatccagaactctgacttggtgaagcatcagaaggtgcacacaaggtcgtcgctctcc
gatcctcgtgccccagccgtgacttccccttaccagtgttctgaatgcgaccggactttt
agccactggtcgacctttatgaagcactcaaagctgcacagtggagagaagttccagtgc
atggagtgcaaaaaaggcttcgtacagaagtctgatttggtgaagcacctccgcgtccac
accggagagaaaccgttcaaatgcctcgtgtgtaagaaaagcttctcccagaaatccgac
ctgcacaaacactggagaattcacactggggagaagccgttcccgtgtcacacgtgcgac
aaaagcttcaccgaaagatcggctctcattaaacaccacaggacccacaccggggagcgg
ccgcacaagtgcagtgtctgcgagaaaggcttcatccagaaatctgcgctcaccaagcac
atgaggagccacacgggagagaaaccatacgcctgcgcccagtgcggcaagagtttcatc
cagaactccgacttggtgaagcaccagagaatccacacgggggagaaaccatatcactgt
accgaatgtaacaagtgctttaccgaagggtcgtcgctggtgaagcaccggcgtacccac
tcaggggagaaaccatatccgtgcacacagtgtgaaaaaaccttcacccaaagctcagac
cttgttaaacacaccatggtccacaatggagacaccccaccggccgccacggcgttccat
gaaatcctcataaaacaggagactgggagcgaagggctgaggagtcggctggtttcctat
ccgtgtccggagtgtgacaaggtcttctgccagagacccgccctggtcaaacaccagaga
actcacaaggcagagaaacgatatccgtgcaacgagtgcgacaagagtttcttccagacg
tccgacttggttaaacacctgcgaacccacacgggggaacggccgtaccactgttccgag
tgcaacaagggtttcatccagaattcggacctggtgaagcaccagaggacccacacaggc
gagaggccctacacttgtgccgaatgcaacaaaggcttcgtgcagagatccgccctgacc
aaacacatgcgaactcacaccggggagaaaccatataagtgcgagcagtgccagaagtgt
tttattcagaactcggatctggtcaagcaccaaaggatccacaccggggagaaaccgtac
cactgccctgactgtggcaaacgcttcaccgaaggctcctcccttattaagcaccaaagg
attcacagcagaatcaaaccgtatccgtgcaacgtgtgcggcaaaagcttcagccaaagc
tgcaacctcctcaaacacttgaaatgccacagtgaacagaaccctcctgttgttcttggc
tccggaccgggccttgtatcgaagactcagcctgacccgccggataatatggtttatggt
gatacggccgagaacactaattacgtttcgcccgaggccgccagggagaggttgtttaaa
tgcaacgactgcggcaaatgttttgcccacaggtcggtacttatcaagcacattcggatc
cacacgggggagcggccgtacaagtgcacccagtgcgcccgaagcttcatccagaagtcg
gacctcgtcaagcattatcgcacccacaccggggagaggccgtacaagtgcgggctgtgc
gagaggagctttgtggaaaagtcggccctttccaggcaccagagagttcacaataacaag
agcccagttccggattctgccgcggaacagcaccaggttacgtactggggagagtctgaa
gatgatccgaagagtctggttccgcagctccatgttgttaaagaagaagatccacgtgta
atgtacggcccccttagtcttctccagagctgctgccctcctgcgataaaggccaagcta
accccgccatacatgtgctcggagtgcgggaagtccttcactcacaggtccgtcttcctg
aaacactggcggtcgcacacgggggaacaaccctacacgtgcaaggagtgcggcaagggc
ttcagtcagagttctgccctggtgaaacacgtgcggatacacaccggggagaggccctac
gcctgtcccacctgtgggaagagcttcatccagaactcggacctggccaaacaccagcgg
atccacacaggagagaagccgtacagatgcaccacgtgcggcaagaaattcatcgaccgc
tcgtccgtggtcaagcactcgagaacccacacgggggagaggccgtatccgtgcaaggag
tgtggcaaaggctttgtccagaggtcggatctggtgaaacacacgaggactcacacaggg
gagaaaccctatgcgtgcaacgggtgtgagcgcagctttagcacccactccgcctccgtc
cggcaccagcgcttgtgcaacatgggccgaccctgtcggtatcagaacagcttgttctat
agcgcggatatcacttggcaggaacagtatgcggagctggtccaagtaccaatgaactca
gaggaaccaatgaacgcaattggttggatttctgaagtcgttctgtga
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