Xenopus tropicalis (tropical clawed frog): 101731242
Help
Entry
101731242 CDS
T01011
Name
(RefSeq) oocyte zinc finger protein XlCOF7.1-like
KO
K09228
KRAB domain-containing zinc finger protein
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
101731242
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
101731242
Transcription factors [BR:
xtr03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
101731242
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
C2CH-3rd_BIRD-IDD
zf-C2H2_6
zf-met
KRAB
Motif
Other DBs
NCBI-GeneID:
101731242
NCBI-ProteinID:
XP_017952890
UniProt:
A0A8J0T707
LinkDB
All DBs
Position
9:4442676..4448198
Genome browser
AA seq
696 aa
AA seq
DB search
ILNLTLEIIYLLTGEGYVIPKKKSPTVGLGALHAPGSVIQKENDKKILELISNIIQLLTG
EVAIRCEDVSIYFSLEEWEYIKGNKALYREGIKEEEEEPQQLRPLDGEYEDKREIPADLG
GTLCYNNEPSKIGAEGADFCADRNLTNPEISPAEQPPLANGIKEEAASWEEGNQSDCSII
PLTEQRQGTDTPTPIMAHTFNKSSDVNHNRFDKNIHTNALHAAHLAKHPTQGTYNCPTCH
KPFTKSYDFIRHLRTHTGVKPFSCSECGKSFTRRFNLNVHRRTHSGNIPQGQQQTAADSV
KGATALHDGGNQSGCSLNSFMKQTWGTDTPTPVMGSSLGNSSADNSISSGMRGSAPALWK
EGNQSDCSINPLTEQIQGTDTPTPIMGCSLSNSSAETKTYECDKNINSNGSHESPVKNLK
STSDECHFAFTNRRDLVRHERTHTGEKPFPCPVCGKCFARCSDLNVHKGVHSGEKPFCCS
DCGKCFTHRANLAAHVKTHTDLKPFSCDKCGKCFKRRSHLKGHQIVHTGEKPFSCSECGK
SFAKRSNFTAHCSTHTDGKTFTCSDCGKGFKYRADFKVHQRLHLGENPFPCSECGKSFTR
RSHLIVHLKTHTGEKPFTCPECGKSFTQRSDMNIHRRLHTGERPFPCPECGKCFSQFSYL
NVHRRTHTGERPFSCDECGKCFKQRTHLNVHRKIHL
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atcctgaatctcacactggagattatctatctgctgactggagagggctacgtcatccct
aagaagaagagcccaactgtgggtttgggggccctgcatgcccctggctccgtcatacag
aaggaaaatgacaagaagatcctggaactcatctccaacatcatccagctgctgactgga
gaggttgccataaggtgtgaggatgtttccatctatttttccttggaggagtgggagtat
ataaaaggaaacaaggccctttacagggaagggataaaggaggaagaggaggagccccag
cagctccgcccactggacggtgaatatgaagataagagagagattccagctgatctggga
ggaacattatgttataataatgagccaagcaagattggggctgaaggggcagatttttgt
gccgacagaaatctcacaaaccctgaaatttctccagcggaacagcccccactggccaat
gggattaaagaggaggcggcttcatgggaagagggaaaccaatcagattgcagcattatt
ccccttacagaacagagacaaggaacagacacacctactcctatcatggcacacactttc
aataaaagctcagacgttaatcacaataggtttgataaaaacatacatacaaacgcccta
catgcggcccaccttgccaaacatcccacccaggggacctataactgccctacctgccat
aaacctttcactaaaagctatgattttatcaggcacctgagaactcacacaggggtgaaa
cccttttcgtgctcggaatgtggcaaatcttttacccggcgctttaacctgaatgtacat
cgtagaactcactctgggaatatcccacagggccaacagcaaacagcagccgatagtgtt
aaaggtgcaacagctttgcatgatggaggaaaccaatcaggttgcagtttgaattcattt
atgaaacagacatggggaacagacacacctacccctgtcatgggaagcagcttgggtaac
agctcggcagataattctatatcttctggaatgcgaggcagtgcaccggctttatggaaa
gagggaaaccaatcagattgcagcattaatccccttacagaacagatacagggaacagac
acccctactcctattatggggtgcagcctgagtaacagctcggccgaaacaaagacttat
gaatgtgataaaaacattaacagtaatggatcacatgaatctcccgtaaaaaatttaaaa
agtactagcgatgagtgtcattttgcttttaccaataggagggacctcgttaggcatgaa
agaacccacacaggggagaaaccatttccttgtcctgtatgtgggaaatgttttgcccgt
tgctcagatcttaatgtccacaagggagttcactcaggagagaagccattttgttgttct
gactgtgggaaatgtttcacacaccgcgcaaaccttgctgcgcacgtaaagactcacacg
gatctgaaaccgttttcttgtgataaatgcggcaaatgtttcaaacgccggtcgcacctt
aaagggcatcagatagttcacacaggggagaagcccttttcttgctccgaatgtgggaaa
tcctttgcaaagcgctcaaactttaccgcacattgcagtactcacacagacgggaaaacg
tttacctgctccgactgtgggaaaggtttcaagtatcgagctgattttaaagtccatcag
aggctgcacctaggggagaatccatttccctgttctgaatgcggcaaatcttttacacgt
cgctcgcacctcattgtgcacttgaaaactcacacaggggagaaaccctttacttgcccc
gaatgtgggaaaagttttacccaacgctcagacatgaacatccatcgtaggcttcacaca
ggggagaggccgtttccctgccccgaatgtgggaaatgtttttcgcagttctcctacctt
aatgtacatcgtagaactcacacgggagagagacccttttcctgtgatgaatgtgggaaa
tgttttaaacagcgcacacacctgaatgtacacaggaagattcatctgtaa
DBGET
integrated database retrieval system
