Xenopus tropicalis (tropical clawed frog): 101731631
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Entry
101731631 CDS
T01011
Name
(RefSeq) oocyte zinc finger protein XlCOF7.1
KO
K09228
KRAB domain-containing zinc finger protein
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
101731631
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
101731631
Transcription factors [BR:
xtr03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
101731631
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
C2CH-3rd_BIRD-IDD
zf-C2H2_6
zf-C2H2_jaz
Zn-ribbon_8
zf-C2H2_11
zf-met
HVO_2753_ZBP
zf-LYAR
zf-C2HE
Motif
Other DBs
NCBI-GeneID:
101731631
NCBI-ProteinID:
XP_017952893
UniProt:
A0A8J0SWW9
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All DBs
Position
9:2708214..2710767
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AA seq
444 aa
AA seq
DB search
MGCSLNNSSADNSILDDIKEEAASCEGGNQSDCSINPLTEQIQGTDTPTPIMGCSLSNVP
SETDCSENSKTLNTVPTSHQKSEALPVSYKHSSFSSTKKRNCRQERTCTGEKPYSCLECG
KCFRQKRSFMEHQRTHTGEKPFSCSECGKGFVRRADVTAHQRIHTGDKPFSCSDCGKRFT
FRSNFVTHQKSHSAEKPYSCSVCGKGYTQSTQLKIHLQSHTATLSFSSGEGFPNNAVIQS
VSERKTVSCPECGKCFMSRTSLNVHKRVHTGQTCPCSECGKIFLSRSNLKVHLRTHTGEK
PYSCSECGKCFTSYAILTAHMRIHTGERPFSCQECGKSFSYRSVFTEHQKIHTGEKPFSC
SECGKCFRYRSHFKAHNRAHTGERPYSCSECGKGFKRKLQLNLHQRIHTGVKPFSCPECG
KCFTQQSNLVVHRRKHAAGNTTLF
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggggtgcagcctgaataacagctcggcagataattctatattagatgatataaaagag
gaggcggcttcatgtgaaggggggaaccaatcagattgcagcattaatccccttacagaa
cagatacagggaacagacacgcctactcctatcatggggtgcagcctgagtaacgttccc
tcagaaaccgattgcagtgaaaatagcaaaacactaaacacagttcccacttcccaccaa
aaatcagaagccctaccggtgagttataaacattcttcattttccagcacaaagaagaga
aactgtagacaggagagaacttgcacaggggagaagccttattcttgcctggaatgtggg
aaatgtttccgacaaaaacgctcatttatggaacatcagagaactcacacaggggagaaa
cctttctcttgttctgaatgtgggaaaggttttgtgcgcagagcagatgtcaccgcgcac
cagagaatacacaccggggataaaccattttcctgttccgactgcggcaaacgctttaca
tttaggtctaacttcgttacacatcagaaatctcactcggctgagaaaccatattcttgc
tccgtatgtggcaaaggttacacacaaagtactcagctgaaaatccatctccagagccac
acagcgactctgtcctttagttccggcgaaggttttccgaataacgccgtgattcaaagt
gtcagtgaacgcaaaactgtttcctgccctgagtgtggaaagtgtttcatgagtcgcacc
tccctcaatgtgcataagagagttcacaccgggcagacgtgtccttgttcggagtgcggg
aaaattttcttaagccgatcaaacctcaaagtgcacctacggactcacacgggggagaaa
ccctattcctgctccgaatgcggcaaatgtttcaccagttacgccatcctcaccgcgcac
atgagaattcacacgggagagaggccattttcttgtcaggaatgcggcaaaagcttttcc
tatcgctccgtcttcaccgagcaccagaagattcacacgggggagaaaccattcagctgc
tccgagtgcgggaagtgcttcaggtatcgctcgcactttaaggcacacaacagagctcac
acgggcgaacgaccctactcttgttccgagtgcgggaaaggtttcaaacgcaaattgcaa
ctgaatttgcatcagcgaattcacacgggcgtgaaaccgttttcttgtcccgaatgcggc
aaatgttttacgcagcagtccaacctggtcgtgcatcggaggaaacacgccgccggaaat
acgactttattctga
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