Xenopus tropicalis (tropical clawed frog): 101731998
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Entry
101731998 CDS
T01011
Name
(RefSeq) sialic acid-binding Ig-like lectin 16
KO
K06749
sialic acid binding Ig-like lectin 10
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
101731998
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
xtr04091
]
101731998
Lectins [BR:
xtr04091
]
I-type lectins (Siglecs)
101731998
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GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
V-set
C2-set_2
Ig_4
Ig_CD22
SIT
Syndecan
Motif
Other DBs
NCBI-GeneID:
101731998
NCBI-ProteinID:
XP_031762296
UniProt:
A0A8J1K0R4
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Position
7:121215249..121278404
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AA seq
578 aa
AA seq
DB search
MACSFIAASTNNCIVSKRTKGRFTLTGKVHEGDCSFSISNAQPADQGEYEFRIEAGSLKY
SYSRYRLSVSVTDLPEPTISPVGELIAGKPITLTCTAHPAPQGCKGNITWGGRINIENIS
NYEREDQAGKVTSISDITVTPSQREHNSPLTCTVTYSGVSTNSSITLGVQFPPEMKITVS
GYNGTYENKSVTVIEGDTKLLRCEVNSNPVAEISWGRGDEILSETSGQGVTLALENVSVA
DTVTYTCLARNTHGSVSGTVSVTVAYAPRRPTISNCTSKGCRVEAIEGTSLSLLCSAESN
PPANLSWAKMGQNSTDPLNSSSGRFDVSHVTTDNGGDYMCRARNKHGNSTVSVTVVIIYA
PRRLTINYCTINDCFEEKNSSVEVLKSVEVLEGNSLYLQCDADSNPPANVSWIKPLQNIT
QPLLSAQLNVTNATSQNGGNYMCWATNRVGNESKSITVVIKSLTNDKIHREGLMFGGIFL
LLLAAIVIVTVLVMRYKKKRRPPELVEENTSSSPNNYEAVYANIDRRTAQEPSMGLSSPN
EGESPDEELQYVTLDISKLKPKSSPETQETLYTEVKRN
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atggcttgtagcttcattgcagcctcaacaaataactgtatagtttctaaacgaacaaaa
ggccgattcaccctgactgggaaagtacatgagggagactgctcattctctatcagcaat
gcccaaccagccgatcaaggagaatatgaattccgaattgaagccggatcccttaaatat
tcctatagtcggtacaggctcagtgtgagtgtgacagatctaccagaacctactatatcc
cctgtgggggagctgatcgctgggaagccaataacactgacttgtacggctcatccagca
cctcaagggtgcaagggaaacatcacatggggaggaaggataaacatagagaacatatct
aactatgagcgggaggatcaggctggtaaagtcacctccatatcagatatcactgttact
ccatcccagagagagcacaatagccccctaacatgtacagtgacttacagtggggtctcc
actaacagcagcatcaccctgggtgttcagtttcctccagaaatgaaaattacagtttca
ggatataatggaacttatgaaaacaaatcagtgactgtgatagagggagacacaaagctt
ctccgatgtgaagtaaacagcaacccagtggctgaaatttcctgggggagaggagatgag
attcttagtgaaacatctgggcagggtgtgactcttgcactggagaatgtatcagttgct
gatactgtaacctacacgtgcttagcaaggaatactcacgggtccgtctctgggactgtt
agtgtcactgtagcatatgccccaagaagaccaactatttcaaactgcacatcaaagggt
tgccgggttgaagccatagaaggaacctccctgtccctgctctgctctgctgaaagtaac
cctcctgccaacctgtcctgggcaaaaatgggtcagaacagcaccgaccccctaaattcc
tcaagtgggagatttgatgtttctcatgtaaccactgataatgggggagattatatgtgc
cgggcaaggaataaacatgggaattcaacagtatcagtcacagttgttatcatttatgct
ccaagaagactaactattaactactgcacaataaatgattgcttcgaggaaaaaaactct
tctgttgaagtcttaaagtctgttgaagtgttagaaggaaactccctgtacctgcagtgc
gatgctgacagtaaccctccggcaaatgtgtcctggataaaacctttacagaacatcacc
caaccgttactctcagcgcaactgaatgtgaccaatgcgacctctcaaaatggagggaat
tatatgtgctgggcaacaaacagagttggaaatgaaagtaaatctattactgtggttatc
aaatctctcacaaatgataagatccatcgtgaagggttaatgtttggtggaatttttctc
ctactcctcgctgccatagtaattgtaacagttctggttatgcgatacaagaaaaagagg
aggccaccagagctggttgaagaaaatacaagttcatcaccaaataattatgaagcggtt
tacgccaatatagacagaagaacagcccaggaacccagcatgggtctcagctctccaaat
gaaggtgaaagccctgatgaagaactgcaatacgtgacccttgatatctcaaagttaaaa
ccaaaaagttctccagaaacacaagagactttatatacagaagtcaaacggaactaa
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