Xenopus tropicalis (tropical clawed frog): 101732113
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Entry
101732113 CDS
T01011
Symbol
tmc4
Name
(RefSeq) transmembrane channel-like protein 4
KO
K21988
transmembrane channel-like protein
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xtr02000
]
101732113 (tmc4)
03037 Cilium and associated proteins [BR:
xtr03037
]
101732113 (tmc4)
Transporters [BR:
xtr02000
]
Other transporters
Pores ion channels [TC:
1
]
101732113 (tmc4)
Cilium and associated proteins [BR:
xtr03037
]
Other cilia and associated proteins
Stereociliary proteins
101732113 (tmc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
101732113
NCBI-ProteinID:
XP_004916295
Xenbase:
XB-GENE-991359
UniProt:
A0A6I8RKK5
LinkDB
All DBs
Position
7:104872862..104888064
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AA seq
700 aa
AA seq
DB search
MYYSEDGIINEDLHPLGTGSVWRTSESPVSNQFSEKGLRHRGNESHLETIDLQPMLQGRS
LQVWTELQDEDEDKPVKEFCCSMQRKREIRQKQEKLGAKKNNWESWKQDKSRSIQQFQSK
ASESLQFLVLWRRTINTIGGNFGTGIASYFTFLRFLILMNLVTFLLIGGFIVIPNIVFQE
LNVNQTSQSSNSNGLCLKYSPNPQGLERYYTFIMDILMGTGFMELTYMFYGFYKNTLVIL
AEFYYNLPLAYLTTTLFYFLLSLVWIVVRSVKGFKQSLVTENTQLSNYTSKIFVGWDFCI
KDPRIVKLKQKSIRYELQMDLEEENMKRKHAERTTSQRATIYTLRVFFNLVVICLTGAAF
YCIYLSTVNSQVLLTNSSVKENFILDLVVGYLPSIVITAANFFLPIVFGIIIQWEKYTLS
WEIRLTLIRCVFLRLASLGMLLYSLWDKITCSGTPQDAQCVTCGYNIDQYKCWETRVGQE
MYKLLIFDFLTVLVVILLVDFPRKMMVDHCSCKPIQFWGQQEFLVPQNVLDIVYGQTVCW
IGTFFCPLLPLLNTVKYFIIFYLKRLTLFANCRPADRTFRASSANFFFMLVLLLGLAISW
VPVLYSIFSMTPSKACGPFQGQNKIWETVPMTIETLPKTAAEFFMFIGSQAFVVPLFCLC
CILMFYLIALASSYGKLVMTLKDQLQMERSRKIFLRQVSY
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgtattattctgaagatggcatcataaatgaggacttacatccgctgggtacagggtcg
gtctggcggacctctgaatctccagtttcaaatcagttctctgaaaaaggactgcgtcac
cgtggcaatgagtctcacttggagacaattgaccttcagcccatgctgcagggccggtca
ttacaggtgtggacagaactacaagatgaggatgaggacaaacctgtgaaagagttttgc
tgctccatgcaaaggaaaagggaaatacgacaaaaacaggagaagctgggtgcaaagaaa
aacaattgggagtcatggaaacaggataaaagcagatctatccagcagttccaaagcaaa
gcatctgagtccctgcagttcctggtgctatggaggagaacaatcaataccataggaggg
aactttggcacagggatcgcctcctacttcacttttcttcgattcctgatcttgatgaac
cttgtgacatttctcttgattggaggatttattgtaattcccaacattgtcttccaagag
ctgaatgtcaaccaaacctcacaaagctccaactcaaacggattgtgtctgaaatacagt
ccaaaccctcaagggctcgagagatattacacattcatcatggacatcctgatgggaaca
ggtttcatggagctcacctatatgttctatggtttttacaagaataccttagtaatcctg
gctgaattttactacaacttgcccctggcatatctcactaccactctgttttactttcta
ctcagccttgtgtggatagtggtcagatctgtcaagggatttaagcaaagcctggtaact
gagaacacacagctaagcaactacaccagcaaaatatttgtgggttgggatttttgcatt
aaggaccccaggattgtaaaactgaaacaaaagagcatccggtatgagctgcagatggac
ctggaagaggaaaacatgaagcgtaagcatgctgagcgcaccacatctcagcgtgccact
atttatactctgcgggtcttcttcaacctggttgtgatctgtctcactggagcagcgttc
tactgcatctacctgtctactgtcaactctcaagtgctgctcacaaatagttcagtcaaa
gagaacttcatcctggatttagtggttggataccttccctccattgtcatcacagctgct
aacttcttccttcctattgtctttgggattattatccagtgggagaagtacacactcagc
tgggagatcaggctcacactgatcaggtgtgtattccttcgccttgccagcctgggaatg
ctgctctattctctctgggacaagatcacatgcagtggaacacctcaagatgctcaatgt
gtgacctgcgggtacaacattgatcagtacaaatgctgggagacacgtgtgggacaggag
atgtacaagttgctgatatttgattttctgactgttcttgtggtcattctgctggtggac
tttcccagaaagatgatggttgaccactgctcatgcaagcccattcagttctggggccag
caggagttcctggtgcctcagaacgtactggatattgtctatgggcagactgtctgctgg
atcggaaccttcttctgccctttacttcctcttctcaatacggtcaaatatttcatcatc
ttctacttgaagaggctgacactttttgccaactgtcgtccagctgatcgaacgttccga
gcatcgagtgccaactttttctttatgttggttctgctgctgggcctcgctatatcgtgg
gtgccagtcctgtacagtatattttcaatgacaccatcaaaagcctgtgggccattccaa
gggcagaacaaaatctgggaaacagtccccatgaccattgaaaccctccccaagacggcg
gcagaattctttatgttcattggatcgcaagctttcgttgtgcctttgttctgtttgtgc
tgcattttaatgttctacctcattgcactggcaagttcatatggcaaactggtgatgacc
ctgaaggatcagctacagatggaaagaagcaggaagatattcctgagacaagtgagttac
tga
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