Xenopus tropicalis (tropical clawed frog): 101732149
Help
Entry
101732149 CDS
T01011
Name
(RefSeq) gastrula zinc finger protein XlCGF57.1
KO
K09228
KRAB domain-containing zinc finger protein
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
101732149
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
101732149
Transcription factors [BR:
xtr03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
101732149
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-C2H2_6
Zn-ribbon_8
zf-met
zf-C2HE
zf-C2H2_11
ROS_MUCR
zf-HYPF
Motif
Other DBs
NCBI-GeneID:
101732149
NCBI-ProteinID:
XP_012821253
UniProt:
A0A8J0SS34
LinkDB
All DBs
Position
6:3915634..3918557
Genome browser
AA seq
428 aa
AA seq
DB search
MFQGEQKKIRTGRNSYPDTGTSLRKRSRTSEISKMKKIREDRSENIQANLSQTQTHKEFC
KTSSNDWPPMPPEFGADGKSPALRTQRLQDTDFRISFDCKECGESFGQQSKLEAHFLCHT
GEKPFVCVHCGKGFKNKYKLNLHLRIHTGEKLSVCPHCGKSYRDKTKLIVHLRIHTGEKP
FVCTECGKGFRDSSSLKSHLRIHTGEKPFVCTECGKGFRKNHELKLHLHIHTGVNPFVCT
ECGKCFRDKSELNIHINVHTGKTFPCTECGKSFAAKKNLKRHQMVHTGEKPHECTECGKR
FMEKSKLNIHYRSHSGVKPFSCCECGEQFGWKHQLKYHQLSHTGERPFVCTECGKNFKTK
AALTLHCYVHTGEKPLVCPECGKGCRDQTSLNSHVRKHTGEKPFVCAECGKSYKDSSTLR
HHLQTHIR
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgttccagggggaacagaaaaagatccggacaggaaggaattcttatccagacacagga
actagtctgagaaagagaagcagaacctcagagatctccaagatgaagaagatcagagaa
gacagaagtgaaaacattcaggccaacctcagccaaacccaaactcacaaagaattttgc
aaaacctccagtaatgattggcctccgatgcctccagagtttggtgctgatgggaaatct
cctgctctgagaacacaaaggttacaagatactgatttcagaatatcatttgactgcaaa
gagtgtggagaaagcttcgggcagcagtctaagcttgaagcgcattttctgtgccacaca
ggtgagaagccatttgtctgtgttcattgtgggaaaggtttcaagaataaatacaaactt
aatctccatctaaggattcacacaggagagaagctttctgtctgtcctcattgtgggaaa
agctacagagataagactaaactcattgttcatctaaggattcacacaggagagaaacca
tttgtctgcactgagtgtgggaaaggcttcagggattcgagctctctgaaatctcatcta
cggattcacacaggagagaaaccatttgtctgcactgagtgtgggaaaggcttcaggaaa
aaccatgaactcaaattgcaccttcatattcacaccggagtgaacccatttgtctgcact
gagtgtgggaaatgtttcagggataaaagtgaactgaacattcatattaacgtacacaca
ggaaagactttcccctgtacggagtgtggcaaatcctttgcagcaaagaagaatctgaaa
aggcaccaaatggttcacactggggagaaaccacacgagtgcacagagtgtgggaaacga
ttcatggagaaaagtaaactgaacatacattatcggagtcattcgggagtgaaaccattc
agctgctgtgagtgtggagaacagtttggatggaaacaccagctcaagtatcaccaactg
agtcacaccggggagaggccatttgtctgtactgagtgtgggaagaacttcaaaacaaag
gctgcactcactctgcactgttatgttcacacaggggagaaaccattagtgtgccctgag
tgtgggaaaggctgtagggaccagacgagcctcaatagtcatgttcggaaacacacggga
gaaaaaccttttgtgtgtgccgagtgtgggaagagttacaaggactccagtaccctgagg
caccatcttcagactcacattagatga
DBGET
integrated database retrieval system
