Xenopus tropicalis (tropical clawed frog): 101734246
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Entry
101734246 CDS
T01011
Symbol
itga10
Name
(RefSeq) integrin alpha-10
KO
K06586
integrin alpha 10
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04510
Focal adhesion
xtr04512
ECM-receptor interaction
xtr04810
Regulation of actin cytoskeleton
xtr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
101734246 (itga10)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
101734246 (itga10)
09142 Cell motility
04820 Cytoskeleton in muscle cells
101734246 (itga10)
04810 Regulation of actin cytoskeleton
101734246 (itga10)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xtr04515
]
101734246 (itga10)
Cell adhesion molecules [BR:
xtr04515
]
Integrins
Integrin alpha subunits
101734246 (itga10)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_2
Integrin_A_Ig_1
VWA_2
FG-GAP_3
ITGAX-like_Ig_3
Integrin_A_Ig_3
FG-GAP_2
CmlA_N
Motif
Other DBs
NCBI-GeneID:
101734246
NCBI-ProteinID:
XP_031747324
Xenbase:
XB-GENE-6049791
UniProt:
A0A6I8PVE3
LinkDB
All DBs
Position
8:141704576..141757438
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AA seq
1163 aa
AA seq
DB search
MESHRHLLILLSLLLEPGSISCFNIDTRRPRIFRGPEEAQFGYKVLQHEAEGQKWMLVGA
PWDGSEDNRQGDVYRCIVGDQSNSSCTKVNLGELALRNALAQMKNMHLGMALTPDSQGGF
VACAPLWSQECGTSMYSTGICASVDKAFRPSGTVAPTAQKCSTYLDIVIVLDGSNSIYPW
YEVQNFLSNILSKFFIGPNQIQVGVLQYGEVAVHEWSLKDYSTSQEVMKAAKNISRQEGR
ETRTAFAIHEACSEAFSQERGGREGASRLLIVVTDGESHDGDELPEALAECEKRAITRYA
IAVLGHYTRRQQDPDSFINEIKYIASDPDEKYFFNVTDEAALNDIVDALGDRIFILEGTH
GFNESSFELEMSQAGFSIHPLEDGLLFGMVGAYDWDGAVLKESSHGRVLPPRSAFQKEFP
VKMKNHAAYLGYTVSSITLRSGRSLYVAGAPRFKHKGKVILFEMPWNGGLSISQALVGEQ
IGSYFGSEVCPVDVNGDGATDVLLVAAPMFLGPQNKESGRVYMYRVGQMYLSHNGTLQPD
RRAQDSRFGYAMASALDLNHDGFNDVVVGAPLEDNHMGAVYIYHGYRSTILPTYKQRIDS
ASLQPGLRYFGRSVSAKMDLDGDGLVDVTVGSQGAAVMLRSRSIVRVNASLNVVPPSINM
IHKNCRRHDKESVCLNVTLCFSVTSRSPGNWDSRFGLHYNISLDDRKITPRAVFDENSQK
ALAKRIRVSVGKVTCMNLGFHVTETVDYLRPVGVLLRFNLSDSESSPVLDDRCPSSLKRL
VPFFKDCGEDDECITDLVLQARMDINGSREEPYIIRRERKKVAVEVTIENKRENAYNASL
RVWFSRNLLFSSVSRKGEAQKVECAALSGNTRSCSVSYPVLRSGSKVVFVLEFEFNCSHL
LNRVQIKLTTNSDNTELNETLHDNTASLLVPVRYSPEIYLLSESSLNRYELPSLRASYPL
GPEFRTTFKIHHTDCYPIYNVSMHIHSPAMAYGSSSFLAVSRIMADSATCVLSNPTRPTG
AAPFHPDNLLHTDILNCSNTWCETITCLFHSLHSNAELSVTLLRVIHNQFFSKTKFKSVR
VVSTFALDIREDGTLLTGDTGHRRESILEILQPRLLPLSLWILIGSIIGGLLLLALIIFI
LWKLGFFTRKTQGEEEEPEGQEQ
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atggagtcccaccggcacctcctcatcctcctctctctgctcctggaaccagggtcgatt
tcatgctttaatattgacaccaggaggccgcgtattttccgggggccagaagaagctcag
tttggctacaaggttctccaacatgaggctgaaggccagaaatggatgttggtgggggcc
ccgtgggacggctcggaggacaaccggcagggagatgtgtacagatgcattgtgggtgat
cagagcaactcctcctgcactaaagtcaacctgggggagctcgccctgcggaacgccttg
gcccagatgaagaacatgcacttgggaatggcgctgacacctgactcacaaggtggtttt
gtggcttgcgcccccttgtggtcccaggagtgcggcacttccatgtacagcactgggatt
tgcgccagtgtcgataaggctttccgcccctcggggaccgttgcacccaccgcccagaaa
tgctccacctatctggacattgtgattgtgctggacgggtccaacagtatctacccctgg
tacgaggtgcagaatttcctcagcaacatcctcagcaagttcttcattggcccaaatcag
atacaggtgggggtgctccagtacggagaagtggcagtacacgagtggtccctcaaagat
tacagcacctctcaggaagtgatgaaggccgccaagaacatcagtcggcaggaagggcgg
gagacaaggacggcatttgccatccatgaggcctgcagtgaggcgtttagccaggagagg
ggcgggagagagggggcaagtcgactcctcattgttgtaactgacggtgagtcccacgat
ggggatgaactcccggaggcactggctgaatgtgagaagagggccatcacgcgttacgcc
atagcggtgttgggtcactacacgaggcgccagcaggaccccgattcttttatcaatgag
attaagtacatcgccagcgacccggacgagaagtatttctttaatgtcaccgacgaggcg
gctctgaatgatatcgtggatgcccttggggatcggatcttcatcttggaagggacccac
ggcttcaacgagagttccttcgagctggaaatgtcgcaggccgggttttccattcatcca
ctagaggacggcctcctgtttgggatggtgggagcctatgactgggatggggcggtgctt
aaggagtccagccatggaagagtcctgcccccgaggtctgcatttcagaaggagttcccc
gtgaagatgaagaaccacgccgcctacctgggttacacggtgtcttccatcactctgcgc
agtgggaggagcctatatgtcgccggggccccaaggtttaaacacaagggcaaagttatc
ctgtttgagatgccctggaacggaggtttatccatttcccaagcactggtgggggagcag
attggctcctactttggcagtgaggtttgtcctgtggatgtgaatggagacggggccacg
gacgtcctgctcgtggctgcacccatgttcctgggaccccagaacaaagaatcagggcgt
gtatatatgtacagggtggggcagatgtacctgagccacaatgggaccctccagccggac
cgccgggcgcaagattcccgcttcgggtatgcgatggcctctgccctcgatctaaaccat
gatgggttcaatgacgtggtggtgggagcgcctttggaagacaaccacatgggggcagta
tatatttatcatgggtatcggagcactatcctgcccacctacaaacagagaatagactcc
gcctccctccagccggggctgcgctactttggccgcagtgtgagcgcaaagatggacctt
gatggggacggactggtggatgtgaccgttgggagccagggggccgccgtcatgttgagg
tccaggagtattgtccgagttaatgcctccctgaacgttgtgcccccctccattaatatg
atccacaagaactgccggcgccacgacaaggagtccgtctgtctcaacgtcaccctctgc
ttctccgtcacctccaggtcccccggcaactgggacagccgctttgggctacactataac
atctccttggatgacaggaagatcaccccacgggctgtgtttgatgaaaattcccagaag
gctttggcaaagcgcatccgagtgagcgtggggaaggttacctgcatgaacctcggcttc
catgttactgaaacagttgactatctgaggccggttggggtcctcttgcggtttaacctg
agtgattccgagtccagccctgtgctagacgataggtgcccctcatctctcaaaaggctg
gttccattctttaaagactgtggcgaggatgacgagtgcataacagatctagttctccag
gcgcgtatggacatcaatggctctagggaggagccctacattatccggagggagaggaag
aaagtggcggtggaggtgaccatagagaacaagagggagaatgcttacaacgccagcctc
cgagtctggttctccaggaatctactgttctccagcgtttccagaaagggagaagcccag
aaagtggagtgcgcggccctgtcggggaacaccaggtcctgcagtgtgagctaccctgtc
ctgaggtctgggagcaaggtggtgtttgttctggagttcgaattcaattgttcccactta
ctgaacagagtgcagatcaaactcaccaccaacagtgataacaccgagctgaacgagacc
cttcatgacaacacggcatctctcctggtcccggtccgatactcacccgaaatatatcta
ctgagcgagtccagtctgaaccgctacgagctgccctccctccgggcctcatacccgctg
ggcccagaattcagaacaacctttaagatccatcacactgactgttaccccatatacaac
gtttccatgcacattcactccccggcaatggcctatggcagctcctccttcctggcagtg
agcaggatcatggctgacagtgccacttgtgttctgtccaacccgacccgacccacaggc
gccgctcccttccaccctgacaacctgctgcacacagacatcctgaactgcagcaacact
tggtgtgagaccatcacctgcctgttccacagcctccatagcaacgccgagctctccgtc
accctcctgcgggtcattcacaaccagttcttctctaagacaaagttcaagtcggtgaga
gtggtcagtaccttcgctctggatataagagaggacggcacattgcttaccggggacacg
ggacatcggcgagagagcatcctggagatcttgcagcccagactcctccctctctcgctg
tggattctgattggcagcatcattggggggctcctcttgttggcgctgatcattttcatc
ctctggaagctgggattctttacccggaagacacaaggagaggaggaggagccagagggg
caggagcagtga
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