Xenopus tropicalis (tropical clawed frog): 101734303
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Entry
101734303 CDS
T01011
Symbol
ciita
Name
(RefSeq) MHC class II transactivator
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
xtr01001
]
101734303 (ciita)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
xtr04054
]
101734303 (ciita)
Enzymes [BR:
xtr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
101734303 (ciita)
Protein kinases [BR:
xtr01001
]
Serine/threonine kinases: Other
TAF1 family
101734303 (ciita)
Pattern recognition receptors [BR:
xtr04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
101734303 (ciita)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
LRR_4
NB-ARC
NPHP3_N
NLRC4_HD2
LRR_8
LRR_14
AAA
nSTAND3
Roc
AAA_22
ABC_tran
RsgA_GTPase
AAA_14
DUF87
AAA_16
TsaE
Motif
Other DBs
NCBI-GeneID:
101734303
NCBI-ProteinID:
XP_017952759
Xenbase:
XB-GENE-992718
UniProt:
A0A803JN44
LinkDB
All DBs
Position
9:complement(36954085..37023124)
Genome browser
AA seq
1256 aa
AA seq
DB search
MNYFKEILPFTTQIVSNSSSNDLRKLLSQLVETKIISMEYYVSLLSENDTDDLARKIALI
AVEKPEIRHKFPSLFCGPEREDYPLEAPAVSMDSRQENLQLPRKTVSNSFSNTITQFPNN
SLETQTTPLEYFLNSLSENNMDNLTLDMSLKFAERNEILHTCLPLMDELEEEYIFTDATS
FRENSMMDLSTIDSSVLNWSLESESELDLETLSTLDLSDIEKCFLDDPLDFELEDDNCSN
CIDNDEEYDKIARICNYICGEDHQMESLLDGESGNPAEAPNNETLSKKLKRKRKIGPVIP
KRKRINREKPTAPQCMEATEAQDTPDILPTSKSLSAPVHISSLPVIQVFGKLPPEFTPQH
IISLPPGANIIFYTAPSSVSPPFQAQPAPPVSTVTISEIPTVPMSIPCSPDKNCSFSPFT
PAAADLPNSPEATAMSQYPLKENETVTPQSLAPMENSFAEKEKNKYVDLFKAALTEKYKN
LWAFERDVLYTDIALVKSRIDPKPGKVTCKTAEKELVIYDLDEREKEAVDHFSLFADKER
KEMETNIIALLGQSGMGKTVLAKKICQDWSNGAYSQFSLVIFFEWSMLASCKKQYSLKDF
LFELSCCPHERNVEIYQYILRNPEKVLLIFDGVDEFQDSEGLMQASYTASPTKTHKIKEL
FTGLFQKKLLRGCTMLITARPKDKFNQYLTKVDQIVEMSGFSQQQVEWYVNEYFKGFQDF
TDVLKWMREYEYLFRYCYIPFMCRIMCLFAETNFRDERVESHFSLAEFMLTVLQRNEEFT
GQGSSGLSSDEHSNMKGDQAVQCASTPQPSLMENEMDLSNGVHTKHKLPVKKHHINNGNS
LVQHFRTAQSLMEHITDKHFVRYASLELKKKRNHDNCTDMVRRCLVGLLFRKDLNTDLLK
VILKKQKKMTDYFKAIQPETLCPQRLLELCHCVCETNDISLSQHTAQKLSNELSFVGTRL
TPPDVYVLKCILKHSHTKISLDLRRTGIDQQGLKELVKLKTIKSFRASLSDTVRLWKTLQ
TENNLRLLKLCVMKFRIDPFTAESIKDITDLTAIVSIQNEICSCLQELTDGISEIPAIKT
LKKIIFRLGKSHGQNGFMRLVDILPQLPSLQHLDLHSLIENHIGDKSVAKLAEKFPEMLS
LETLDLSQNTITDVGAAKLAMALPSLGSLHTLSLFNNFIQDDGAKKFAEILPEMSSLEKL
HLAYNKISDVGARNLTESLRKCPKMKSLMIYSSAIPHNILHHLQQQDPRISCQSFG
NT seq
3771 nt
NT seq
+upstream
nt +downstream
nt
atgaattactttaaggagatcctgccttttacgacacaaattgtctccaactcctcctct
aacgacctaagaaaacttcttagtcagcttgttgaaaccaagattatatccatggaatat
tatgttagtttgctaagtgaaaatgacacagatgatcttgcacggaaaattgctttgatt
gctgtagaaaaacctgaaattcgccataaattcccatcacttttctgtggacctgagagg
gaagactatccactagaggcacctgcagttagtatggattcaaggcaggagaacctacag
ttacccagaaagactgtctctaactcattctctaataccataactcaatttcccaataat
tctctggaaacacagaccacgccactggaatattttctaaattcactcagtgagaacaat
atggataatcttacattggatatgtccttaaaatttgcagaaagaaatgaaatacttcat
acatgtttaccacttatggatgaactagaagaagaatatattttcactgatgccacttca
tttagggaaaattcaatgatggatctgagcactatagatagtagtgtgctgaattggagt
ttggaatcggagtcagaattggacttggagacactgtccactttggatttatcagatatt
gaaaagtgttttttagatgaccctttggattttgaacttgaagatgataactgcagtaat
tgtattgataatgatgaagaatatgacaagattgccagaatatgcaattatatttgtggt
gaagatcatcagatggaaagtttattggatggagaatcagggaatcctgcagaagcccca
aacaacgaaacattatcaaagaaattaaaaagaaaaagaaaaattgggccagtgatacca
aagcgaaagaggataaaccgagaaaaaccgacagcccctcagtgtatggaggcaacagaa
gctcaggataccccagacattctcccaacatctaaaagtctcagtgcacccgtgcacata
tcttcactacctgtaatccaggtctttggtaaattgccaccagaattcacgccccagcat
ataatcagtttgcctcctggagcaaatattattttctacacagcaccttcttcagtgtcc
ccgccattccaagcacaacctgcgcctccagtttccacagttaccatttcagaaattcca
acagttcctatgagcatcccatgttcccccgacaaaaactgctcctttagtccattcact
cctgcagcagctgatttaccaaattccccagaagcaactgccatgagtcagtaccctctg
aaagaaaatgaaactgttaccccacagtcactagcacctatggagaattcatttgcagag
aaagaaaagaataaatatgtggacttgtttaaagctgcattgacagagaagtacaaaaac
ttatgggcctttgaaagagatgtattgtacactgacattgcacttgtgaaaagcaggatt
gaccccaaacctgggaaagttacatgtaaaacagcagagaaggaacttgtcatttatgat
ttagatgaacgggaaaaagaagcagtggatcatttcagtctttttgcagataaagaaagg
aaagagatggagacaaatataattgcactactgggacaatcaggaatggggaaaactgtt
cttgctaaaaaaatatgccaagactggtccaatggcgcttattcacagttcagtctagtg
attttttttgagtggagcatgcttgcttcttgtaaaaagcaatacagcttgaaagatttc
ctttttgaattgtcttgctgcccacatgaaagaaatgttgaaatctaccagtatatactg
agaaacccagagaaagtgctgcttatctttgatggtgttgatgagtttcaagactcagag
ggtctgatgcaggcttcttacaccgcatcacctacaaagacacataaaataaaggaatta
tttactggccttttccaaaagaagctgctacgggggtgcaccatgctaataactgcaaga
ccaaaagataaatttaatcagtacttaactaaggtagaccagattgtggaaatgtctgga
ttttctcagcagcaggtggaatggtatgtcaatgaatattttaaggggtttcaagatttt
actgacgtgctaaaatggatgagagaatatgaatacttattcagatattgttatatcccc
tttatgtgtaggataatgtgtctgtttgctgaaactaattttagggatgagagagtggaa
tctcatttttctttagcagaatttatgttgactgtgcttcagagaaacgaagagtttaca
ggccaaggttcctcaggtttgtcatctgatgagcattccaatatgaaaggtgatcaagct
gtacaatgtgcctcaacccctcagccttctttaatggaaaatgagatggatttatctaat
ggagttcatactaaacacaaacttccagtaaaaaaacaccatataaacaacgggaattca
ctggttcagcattttcgaacagctcaaagtcttatggaacatataacagacaagcatttt
gtcagatatgcttcactggagctcaaaaagaaacgaaatcatgataattgcactgatatg
gtacggaggtgcttggttggacttttatttcgtaaagatttaaatactgatctgctgaaa
gtcattctcaaaaaacaaaagaaaatgactgattacttcaaggcaatacagcctgaaaca
ctttgtccacaaagactacttgaactttgtcactgtgtctgtgagacaaatgacattagt
ctaagtcaacacacggctcaaaaacttagtaatgaactttcatttgtgggtaccagactt
acgcccccagatgtttatgtgttaaaatgcattttgaagcattcacacacaaaaatatcc
ttggacctaaggagaacaggaattgatcaacaaggattaaaggaattggtaaaactaaaa
accatcaagtcattcagggcatctctcagtgacacggtcagactctggaagaccttacaa
actgagaacaacctcagactgttaaagctgtgtgttatgaaattcagaatcgatccattc
acagcagaaagcataaaagatataactgatcttacagccattgtcagtattcagaatgaa
atttgcagttgccttcaagaattaacagatgggatctctgaaattccagctatcaaaaca
cttaaaaagatcatatttagacttggaaagagtcatggacaaaatgggttcatgaggctt
gttgatatccttccacagcttccatctctccaacatttagatttacattctcttattgag
aatcacatcggtgataaatctgttgcaaagctggccgagaaattcccagaaatgctgtct
cttgagacactggacttatcacaaaacaccataaccgatgtcggtgcagcaaagctggcc
atggctcttccttccttgggctcgctacatacacttagtttattcaacaactttatccag
gatgatggagccaagaaatttgctgagatacttcctgaaatgtcttccctggaaaagcta
catctagcatacaacaagatcagtgatgttggtgccaggaatctcacagagagtcttagg
aaatgtcccaaaatgaagagtttgatgatatacagttccgcaattcctcataatattttg
catcatctccaacagcaggacccaaggatcagttgccagtcgtttggctga
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