Xenopus tropicalis (tropical clawed frog): 101734753
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Entry
101734753 CDS
T01011
Symbol
hmbox1
Name
(RefSeq) homeobox-containing protein 1 isoform X1
KO
K24885
homeobox-containing protein 1
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
101734753 (hmbox1)
Transcription factors [BR:
xtr03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
101734753 (hmbox1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HNF-1_N
Homeodomain
Homeobox_KN
HTH_3
AbiJ_NTD3
DUF494
CUT
HTH_24
HTH_31
HTH_26
HTH_37
NOC3p
HTH_23
Motif
Other DBs
NCBI-GeneID:
101734753
NCBI-ProteinID:
XP_031758944
Xenbase:
XB-GENE-992373
UniProt:
A0A8J1JM42
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All DBs
Position
5:complement(151825791..151883587)
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AA seq
424 aa
AA seq
DB search
MRPSADSSAVSLTETMSHYTDEPRFTIEQIDLLQRLRRTGMTKHEILHALETLERLDQEH
SDKFGRRSTYGSSSYSNSTNNVPASSSTATASTQTLHCGMSPSPSNSCDTSPQPCTTNQN
GRESSERVATSNGKLSPTRYHANSIGPRSYSFEASEEDLDVDDKVEELMRRDSSVIKEEI
KAFLANRRISQAVVAQVTGISQSRISHWLLQQGSDLSEQKKRAFYRWYQLEKTNPGATLS
MRPAPIPIDTDAEWRQTPPPVTATSGTFRLRRGSRFTWRKECLAVMESYFNENQYPDEAK
REEIANACNAVIQKPGKKLSDLERVTSLKVYNWFANRRKEIKRRANIEAAILESHGIDVQ
SPGGHSNSDDVDGNDYSEQDDSTSHSDHQDPISLAVEMAAVNHTILALARQGTNEIKTEA
LDDD
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgcgtccttcagcagacagcagtgctgtgagcctgacagagaccatgtcacattacaca
gatgagcctcgatttaccatagagcagatagacctgctacagcgccttcgacgcacggga
atgaccaagcatgagatcctccatgcgctggagacgttagagaggctcgaccaagagcac
agtgataaatttggcaggaggtccacgtacgggagcagttcctatagcaacagtaccaac
aacgtcccagcctcttcctctacagccaccgcttccacgcagactcttcattgtgggatg
tctccctcgccgagcaacagctgcgacacctctccgcaaccttgcactaccaatcagaac
gggagggaaagcagcgagagggtggcgacgtccaatggcaagttgtccccaacacggtac
catgctaacagcatcggcccgaggtcgtacagcttcgaggcctccgaggaagatctagac
gtggacgacaaagtggaagaacttatgaggagggatagcagcgtcattaaagaagaaatc
aaggcgtttcttgccaacaggagaatatcccaagcagtcgttgcccaagtgactggtatc
agtcagagtcgcatctcacactggctgctgcagcagggatccgacctgagcgagcagaag
aaaagggctttttaccgatggtaccagctggagaagaccaaccctggtgcaacactaagc
atgcgacctgcccctatccccatagacacagacgcagaatggagacagaccccgcctcct
gtcaccgccacttccggcaccttccggttacgaaggggaagtcggttcacctggaggaag
gaatgcttggctgtgatggaaagctattttaatgagaaccagtacccggacgaggccaag
cgcgaggagattgccaacgcctgcaacgccgtcatacagaaaccaggcaagaagctgtcg
gacctggagcgggtcacctcgctgaaagtctacaactggttcgctaataggaggaaggag
atcaagagacgagccaacattgaagcagcaatcctggagagtcatgggatcgatgtacag
agccccgggggtcattccaacagcgacgacgtggatggaaatgattattcggaacaggat
gacagtacgagccatagcgaccatcaagacccaatctcattagcagtggaaatggcagcc
gtcaaccacaccatcttggcgctggcccggcaaggaaccaacgagatcaagacagaggct
ctggacgacgactga
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