Xenopus tropicalis (tropical clawed frog): 101735168
Help
Entry
101735168 CDS
T01011
Name
(RefSeq) interferon-induced protein with tetratricopeptide repeats 5
KO
K24850
interferon-induced protein with tetratricopeptide repeats 5
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xtr03016
]
101735168
Transfer RNA biogenesis [BR:
xtr03016
]
Eukaryotic type
tRNA degradation factors
Other tRNA degradation factors
101735168
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_19
TPR_11
TPR_12
TPR_CcmH_CycH
TPR_17
TPR_14
TPR_1
TPR_8
CFAP70_TPR_C
RMD1-3
TPR_Psidin_N
TPR_9
TPR_7
TPR_15
CFAP70_mid_TPR
ARM_TT21_C
CNOT10_TPR
TPR_MalT
TPR_YpiA_C
Iml2-TPR_39
PRP6_TPR
HAT_Syf1_CNRKL1_C
Motif
Other DBs
NCBI-GeneID:
101735168
NCBI-ProteinID:
XP_031762352
UniProt:
A0A8J1JWT2
LinkDB
All DBs
Position
7:36200508..36203186
Genome browser
AA seq
493 aa
AA seq
DB search
MSDLLEESLKSHLLQLECHFTWTVDMEEVTDIDNMKDRLHDQIAFSPSTPKHRLHNLLAY
TSYLKGDNQEAIRQLQKAEEHLQGTQTAHLDIKRAVTYSNYAWLYYHSNQFSKAQSYLER
VEAIYQKCESSPEHDILLTERYGEQAWALLTLYGKYCERAKECFEKALVLDPDNPELNSG
YATVMYRLESQDLILYETSKYKSLEILKRAVTLNENDTVIKALLALKYVYLGQAEEGGKI
MEEALRQTPDSPYLLRHAGKFYRIVGKIDDAITILKKALNQTPTSCSLHHQIGLCYKMKV
NKLISSAKIAKSLCQPTNAYTRDIKEAISSAVFHFEKTIALEETFIIAYIDLADMYTKGT
QIDKAEDLFQKVLHLGYLTWGEKQQIHFSYAVFKQHTIKSESKAIRHYKEALLIPNKTRY
RAYAEQNLAHLANCKISKNPSDATGFELLGFINQQDGKIREAIDSYEKALELDPDNEDYL
SALCCMRLSLSKE
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacctactagaggaatcattgaagagtcatctgcttcaactggaatgccatttc
acatggactgtggatatggaagaagtgactgatattgacaatatgaaagacaggcttcat
gatcaaattgcattttcaccttcaacacccaaacataggcttcataatttattggcctat
acaagttatttgaaaggagacaaccaagaagcaatcagacagcttcagaaagcagaagag
cacctgcaaggaacacagactgctcatctggatatcaaaagagccgtgacctacagtaat
tatgcctggctgtactaccattccaaccagtttagcaaagctcagtcttacttagaaagg
gtggaagccatttaccaaaaatgtgagtcttctccagaacatgatattcttcttactgag
agatatggagaacaggcctgggctttgttaacattatatgggaagtactgtgaaagagct
aaagagtgttttgagaaagcgctagtgctagatcctgacaatcccgagctcaactcagga
tatgccacagtgatgtatcgcttagaaagtcaagatttaatactttatgagaccagtaaa
tataaatctttagagattttgaaacgtgctgtaacattgaatgaaaatgatactgtgatt
aaggctcttctagctttgaaatatgtatatttgggtcaagctgaggagggaggaaagatt
atggaggaggctctcagacaaactccagactccccatatttacttcgccatgctggcaaa
ttttacagaattgtaggaaagattgatgatgctattaccattctgaaaaaagctctaaac
caaactcccacttcatgttctcttcaccaccagattggactttgttacaaaatgaaggtc
aacaagttaatcagctctgcaaagattgcaaagtcattgtgtcagcctaccaatgcctat
acacgggacataaaggaagcaatttcctctgctgtctttcattttgaaaaaactattgca
ttggaagaaacatttattattgcatatattgatttggctgatatgtacactaaaggaact
cagattgataaagctgaagatttgtttcaaaaagtgttacatttaggatatttaacatgg
ggagagaaacagcagattcactttagctatgcagtttttaagcaacacacaataaaatct
gaatctaaagccataaggcattacaaggaagcattattgataccgaataaaacaaggtat
agagcttatgctgaacaaaatttagcccatttggcaaattgtaaaataagcaaaaaccca
tcagatgcaactggatttgaactgttagggttcattaatcagcaggatggaaaaatcaga
gaagcaattgattcctatgagaaagcactggaactggatccagataatgaggattatttg
agtgcattgtgttgcatgaggctcagtttgagtaaggagtaa
DBGET
integrated database retrieval system
