Xenopus tropicalis (tropical clawed frog): 105945440
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Entry
105945440 CDS
T01011
Name
(RefSeq) gastrula zinc finger protein XlCGF17.1-like
KO
K09228
KRAB domain-containing zinc finger protein
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
105945440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
105945440
Transcription factors [BR:
xtr03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
105945440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf_UBZ
zf-C2H2_11
zf-C2H2_jaz
C2CH-3rd_BIRD-IDD
zf-C2H2_6
BDHCT_assoc
Fer4_17
DUF3268
Fer4_9
Motif
Other DBs
NCBI-GeneID:
105945440
NCBI-ProteinID:
XP_012808902
UniProt:
A0A803K3L5
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All DBs
Position
9:3336980..3338631
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AA seq
318 aa
AA seq
DB search
MGCSLNNSSAVNNISTDIKKEAASWEGENQSDCRINPPTIQIQGKDTPTPIMGCSLGSRP
LKMQCKKYNENASMPPHEYHIAKSTLRKKHSRNECRKHSSQKRDFDKHQRTHKSEKTFSC
SECGKCFSRRSNLDRHHRTHTGEKPFICSDCARCFASSAELTVHRRRNHTGEKPFSCSEC
GKCFASSSELTVHRRTHTGEKPYSCSECQKCFVSSSDFTVHRRTHTGEKPFACSECGKCF
TTSSELTSHRRRTHTGEKPFYCSKCGKSFASSSERTVHQRTHTGEKPFLCSDCGKCFTRS
SALNSHRLQIHTECGKCL
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggggtgcagcctgaataacagctcggcagttaataatatatcaactgatattaaaaaa
gaagcagcttcatgggaaggggaaaaccaatcagattgcagaattaatccccctacaata
cagatacagggaaaagacacacctactcctatcatggggtgcagcctgggtagccgcccc
ttaaaaatgcagtgtaaaaaatataatgaaaatgcctctatgcctccacatgaatatcac
atagcaaaaagtacattacgtaagaaacacagccgcaatgagtgtcgtaaacattccagt
caaaagagagactttgacaaacatcaaagaacacacaaaagtgagaaaactttttcctgc
tctgaatgtggtaaatgtttttcaagacgatcaaaccttgatcgtcatcacagaacccac
acaggggagaaaccattcatctgttctgattgtgcgagatgttttgccagttcagcagaa
cttactgtccatcgacggcgaaaccacacaggggagaaacctttttcctgttctgagtgt
gggaaatgttttgccagttcatctgaacttactgtgcatcgacgaacccacacaggggag
aaaccttattcttgttctgaatgtcagaaatgttttgtctcttcatcggactttactgtc
catcggagaacccacacaggggagaaaccatttgcctgttctgaatgtggaaaatgtttt
actacatcatctgaacttacttcccatcgacgacgaacccacacaggggagaaacctttc
tattgttccaagtgcgggaaatcttttgcctcttcgtcagaacgtactgtccatcagaga
actcacacaggggagaaaccatttttatgttctgattgtgggaaatgttttactagatca
tcggcgcttaattcccatcgactgcaaatccacactgaatgtgggaaatgtttataa
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integrated database retrieval system
