Xenopus tropicalis (tropical clawed frog): 105945546
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Entry
105945546 CDS
T01011
Name
(RefSeq) zinc finger protein 883
KO
K09228
KRAB domain-containing zinc finger protein
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
105945546
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
105945546
Transcription factors [BR:
xtr03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
105945546
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_6
zf-C2H2_jaz
KRAB
C2CH-3rd_BIRD-IDD
Zn-ribbon_8
zf-met
XPA_N
Zn_ribbon_SprT
Cwf_Cwc_15
Motif
Other DBs
NCBI-GeneID:
105945546
NCBI-ProteinID:
XP_017952545
UniProt:
A0A8J0T5X7
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Position
1:105313345..105320846
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AA seq
622 aa
AA seq
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MEEITLMKFCTWNKDEMETEILAAKDLASEELPPKRRRGRPKGSKNRGSYRKGPIKFEDV
AVYFSEDEWNYLEDGQKNLYKNVMMENYYTVSSVGCANEKPKIIVKIEQGEKTYLGHTPE
KTKYVSMLRNARRDQPLELQSSNLNLKNVQTHRREKRLNVPKQLPQECESSHNPQVTDAK
SNHPDVCTVAKLTHQKKGFNAKTPVTYQNTQGNEDKGFTDDDNDDDDDDEVKEEDDDNDD
KDYVINSSTKIKRHYICSQCGKSFGRSSVLRRHQRAHSGVKPYLCTECGRDFVQKSQLIE
HQRTHTGEKPYACPECNRTFSLSSHLVQHRRIHTGERPYICSECGKSFIRGSDLVQHRRT
HTGERLFACTECEKRFTHKSALRQHRRIHSGERPYCCDKCEKSFNHSSHLVRHMRTHTGE
KPYKCTECGKTFTDSSHLVNHQRTHTGEKPYICNECGKSFTYNAGLILHRRTHTGERPYI
CNKCGKSFKGSTHLLRHMRIHTGERPYACSECGKTYTDSSHLVSHKRKHTGEKPYSCSIC
GKCFAMKAHLTQHHIIHTGKRPYECSECGKNFTWYTALIQHQRIHVGERPYECSECGKGF
AQKSTLSVHKRTHREQLAMCSI
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggaggagattactttgatgaaattctgcacatggaacaaggatgagatggaaactgaa
atattagctgccaaggatcttgcttcagaagagcttcctccaaaacgacgaagaggaagg
ccaaaaggaagcaaaaataggggttcctacagaaagggacccataaagtttgaggatgtg
gcagtttatttcagtgaggatgagtggaattatttggaagatggacaaaagaacctttat
aaaaatgtcatgatggaaaattattataccgtcagctcagttggttgtgcaaatgaaaag
ccaaagattattgttaaaattgagcaaggagagaaaacttatttaggtcatacacctgaa
aaaacaaaatatgtttccatgctgcgaaatgctagaagagatcagcctttagaattacaa
tcctcaaacttgaatttaaaaaatgttcagacgcatagacgagagaaaagattaaatgtt
ccaaaacagttaccacaggaatgtgaatcttctcataatcctcaagtgacagatgccaaa
tcaaaccatcctgatgtatgtactgtggctaaattgactcatcagaagaaaggatttaat
gcaaaaactccagtaacctaccaaaatactcaaggaaatgaagacaaaggttttactgat
gatgataatgatgatgatgatgatgatgaagtgaaggaggaagatgatgataatgatgat
aaagattatgtgattaactcaagtaccaaaataaaaagacattatatatgtagtcagtgt
gggaaaagctttggtcgcagctcagtccttcggagacatcaaagagctcactcaggtgta
aaaccatacctctgtactgaatgtggaagagactttgtccaaaaatcccagcttattgaa
caccaacgaactcacacaggggaaaaaccatatgcatgccctgaatgcaacagaacattt
agcctcagttcacatcttgtccaacacagaagaattcacacaggagaaaggccttacatt
tgctcagaatgtgggaaaagttttattcggggttccgatcttgtccaacaccggaggacc
catacaggtgaaaggctgtttgcttgtacagaatgtgaaaaaaggtttacccataaatca
gcccttcgccaacaccgtagaatccactcgggggagaggccatattgctgcgataaatgt
gagaagagctttaatcacagctcacacttagtaagacatatgagaactcacactggagag
aagccatacaaatgcacagaatgtgggaaaaccttcactgatagttcacatttggttaat
caccagagaacacacaccggtgagaaaccatatatttgcaatgaatgcggaaaaagtttt
acatacaatgcaggtcttatactacacagaagaactcatactggagagagaccatatata
tgtaacaagtgtgggaaaagttttaaaggaagcacacaccttttaaggcatatgagaatt
cacacaggcgaaaggccatatgcatgttccgagtgtgggaaaacgtacactgacagttct
catttggtcagtcataagagaaaacatacaggagaaaaaccttactcttgttccatatgc
ggaaagtgttttgctatgaaagcacaccttacacaacaccacattattcacactgggaag
agaccatacgaatgtagcgagtgtggaaaaaacttcacttggtacactgcattaatccag
catcagcgaattcatgttggagagagaccatatgaatgcagtgaatgtggaaaaggattt
gctcagaaatccactctttctgttcataaaaggactcaccgggaacagttggccatgtgc
agtatttaa
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