Xenopus tropicalis (tropical clawed frog): 105946662
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Entry
105946662 CDS
T01011
Symbol
dmd.3
Name
(RefSeq) dystrophin isoform X1
KO
K10366
dystrophin
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
105946662 (dmd.3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xtr04812
]
105946662 (dmd.3)
Cytoskeleton proteins [BR:
xtr04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
105946662 (dmd.3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
EF-hand_2
EF-hand_3
ZZ
Spectrin_SYNE1
WW
FliT
AalphaY_MDB
Motif
Other DBs
NCBI-GeneID:
105946662
NCBI-ProteinID:
XP_031752857
Xenbase:
XB-GENE-5813243
UniProt:
A0A8J1J4R0
LinkDB
All DBs
Position
2:107316535..108410442
Genome browser
AA seq
2375 aa
AA seq
DB search
MKHPEDNRNQIRELAQTLTDGGVMDELINEKLEKFNTHWEEVQQEAVRRQKVLEQSIQSA
QETDKAIRMIQEALNTTDRQLTAYIADRIDAAQVPQEAQKIQSDLMSHEISLDEMKKRNQ
GKEMSKKVLSQIEIAQKKFQEVSTKFRLFQKPANFEQRLIESKRILDEVTFELPVLEIKS
IEQEVVQTQLDQCMKLYKILSEVKSEVETVIKTGRQIVQKQQTENPKDLDERLTALKMQY
NELGAKVTEGKQNLEKCLKLSRKLRKEMNSLTDWLAATDVEVTKRSAVEGMPSNLAEEIG
WSKSTQKEMEKRQQQLKNVHDIGDSLRTVLGGEHNLVDDKLSLLHSNWVAVTSRAEEWFR
LLLQYHSEMESFDQDVATIKTWMNQAESLLDESEKQKPQQREETLKVIKSELNDMQPKKD
SMHENAEELMTNRGAHCRKMVETKLSDLDKRFNAISQRIKSGKALVSSKELEQFNSDMQK
LLEPLEAEIQLGVNPTEEDFNKDMSEDNEEPVKELLLRGNNLQQKITDEKKCEEIKLKQQ
LLQSKHNTLKILRTQRRKKALEISHQWYQYKRQADDLLKCLDDIERKIASLPDPKDNQKL
KEIDGELEKKKEELISVHRQAESLSKEGAGKAVEPTLIQLNKRWKEIESKFAPFRRLHYA
QIQTVPEETTYSMSEGIRVETVHVPSSYLAEIARLLQSIAEVGLLLDSSCLNKKDCEDLA
KQQECLKNIKDSLGRLSGQMEVIQNKKKAVMQCASPRENERIQDKLSDLNFEWENVNKLY
KDRQMKHDRCMEKWMTLQDNMNHFNHWLNEAELILSDIPGDGKDSEKFKHQVKELEDGIG
QQQTFVRALNVSGGEIISQSSPTETADIRDKLESLNSRWHIVNRKINERRRRLEEEKKKL
YGLQEDLNKFCIWLEDAEGIARQPTEPGNELQLNELYEKVKFTAEELLPRKEFLKQLNEA
GGTALGSTTISPKEKKKIESGLKEANQRWIKVSKDLHDKQKEIEDELKNLSLFELQLNQL
TLWVSSVKDQLQFYNQVGRPGAFDIKETEEAILAKQPHVEGILSKGHHLYTKEPAPYVLK
QKLDDLQTEWNTVNLLLQELKRRPAVAAPGGGQTVSVVTQTLVTGSTVPSADMPSSLLLE
VPALAEFNRTCAELTDWLTLLDRVLKAQIVTVGDVEEINEMIIKQKTTLQDLEKRRPHLE
ERITAAQNLKNKTSNPEARAVITDRIDKIQNQWEEVQCHLQNRRLQLQEMLKDSNQWIEA
RHEADQVIEKAKNRTDSWKEISYTVEALKNQNSDLKQFSKELQQWQINVDAANDLALKLL
RDYSTDDTRKVELMKDNINATWARINKRVTERDAALEAALRLLQQFYLDLEKFLAWLTEA
ETTANVLQDATHKDGVLEDTRGLRELMNQWQNLQEEIDGHTEVFHSLDENGQKMLRSLEG
SDDGVLLQRRLDNMNIRWNELRKKSLNIRSHLEASTEHWKRLHVSLQELLAWLQMKNEEL
KQQAPIGGDVPKVQTQIENHRAFKREIKTKEPVIMNAIDTVRIFLDDQPSETMERMHQEP
KEAQTEEQFRNISRVLQKQVDDVSTEWDKLNLRSTDWQKKLDEALQRLQELQEAMDELDH
KLHQAEALKGSWQPVGDLLIDSLQDHLGKIKTFKAEIAPIKNNVNQVNDLAHQFDSTVIQ
LSPYNFSRLEDLNTRWKLLQVSIDERIRQLHEAHRDFGPTSQHFLSTSVQGPWERAISPN
KVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLGLSA
ACEALDQHNLKQNDQLMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDT
GRTGRIRVLSFKTGVISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDAIQIPRQL
GEVASFGGSNIEPSVRSCFQYANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAK
HQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGED
VRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPVTLINFWPVDSAPASSPQL
SHDDTHSRIEHYASRLAEMENTNGSYLNDSISPNESIDDEHLLIQHYCQSLNQESPLSQP
RSPAQILISLESEERGELERILADLEEENKNLQSEYDRLKEQHDHKGLSPLPSPPEMMPS
SPQSQRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNG
TTYSSPTSSLQRSESSQPMLLRVVGSQTSESMGEDDLLSPPHDSSTGLEDVMEQLNNSFP
TARGTNVGSLFHMADDLGRAMETLVTVMTDDEVLE
NT seq
7128 nt
NT seq
+upstream
nt +downstream
nt
atgaaacacccagaagacaatcgcaatcagattagggagcttgctcagaccttaactgat
ggaggtgtgatggatgaactgatcaacgagaagctggagaaatttaatactcattgggaa
gaagtgcaacaagaggccgtaaggagacaaaaggttcttgaacaaagtatacagtctgcc
caggagactgacaaagctattcgcatgatacaggaggctctcaatacaactgacagacaa
ctgacggcctacattgcagacagaattgatgctgcccaggttccacaggaagcacagaaa
atacagtctgatctgatgagtcatgaaattagtttggatgaaatgaaaaaaagaaatcag
ggtaaagaaatgtccaaaaaagttctctcacagattgaaatagcacagaaaaagtttcag
gaggtatctactaaatttcgattgtttcagaagcctgctaattttgagcagcgtttaata
gaatcaaaaagaattcttgatgaggtgacattcgaattgccagttttggagataaaaagt
attgagcaggaagttgttcagacgcagcttgatcagtgtatgaaactgtataaaattttg
agtgaagtaaaatcagaagtggaaacagtgataaaaaccggccgccaaattgtacagaaa
cagcagactgagaacccaaaggatttggatgaaagactcactgcattaaaaatgcaatac
aatgaattgggagcaaaggtgacagaggggaaacagaacttggaaaagtgcctaaaactc
tctcgaaaactaagaaaagaaatgaacagtctgacagattggttagctgcaacagatgtg
gaagtaacaaagagatctgctgtggagggaatgccctcaaacctggctgaagagattgga
tggagcaaatcaacacagaaagagatggagaaaagacagcagcaactgaagaatgttcac
gatataggtgattcactaaggacagtgcttggaggagaacacaatcttgtggatgataaa
ctcagtcttctgcacagtaactgggtcgctgtaacatcaagggctgaagagtggttccgc
ttattattgcaatatcatagtgagatggaatcttttgaccaggatgttgctacaatcaaa
acttggatgaaccaagctgaaagtcttttggatgagtctgaaaaacagaaaccacagcag
agggaagaaactttaaaggtcatcaagtctgaactgaatgatatgcagccaaagaaagat
tccatgcatgaaaatgctgaagagttgatgacaaatcgtggtgcccactgcaggaagatg
gtagaaacaaagctgtctgatcttgacaaacggttcaatgcaatatctcaaaggatcaaa
agtggcaaggccttggtttcttcaaaggaattggagcaatttaattctgatatgcagaaa
ttgcttgaaccactggaggctgaaattcagctgggagtgaatcctacagaagaagacttc
aataaagatatgagtgaagataatgaagagcctgtgaaggaattgctgctaaggggaaat
aatcttcaacaaaaaattaccgatgagaaaaaatgtgaagaaataaaactaaagcaacag
cttttacaatcaaaacacaatactctaaagattttgagaactcaaagaagaaaaaaggca
ttggagatctcccatcaatggtatcagtataagaggcaggctgatgatttactaaagtgc
ttggatgacattgaaagaaaaattgcaagtcttccagatcccaaagataaccagaaactt
aaggagattgatggagaactggagaagaagaaagaagaactgatttcagtgcacaggcaa
gctgaaagtttgtctaaggaaggggctggcaaagcagtggagccaactctgatccagctc
aacaaacgctggaaagaaattgagagcaaatttgctccattccgaagactgcactatgca
caaattcaaactgttccagaagaaacaacttattcaatgtctgaaggaataagagtggaa
accgtccatgtgccttcctcatacctggcagagattgcacgccttctgcagtctattgcc
gaggtggggcttcttctggactcttcctgtctaaataagaaagactgtgaagatttagcc
aaacaacaggagtgcctaaagaatataaaagacagccttgggagactatcaggtcagatg
gaggtgattcaaaacaagaagaaagcagttatgcaatgtgcttcaccaagagaaaatgag
agaatccaagacaaattgtcagatcttaattttgaatgggaaaatgttaacaagctttac
aaggacaggcaaatgaagcatgacagatgtatggagaaatggatgactctacaggataat
atgaatcatttcaaccactggttaaacgaagctgaacttattctttctgatattccgggt
gatggaaaagactctgaaaagtttaaacatcaagtgaaggagcttgaagatggcatagga
cagcagcaaacttttgtccgagcgctgaatgtatctggtggagagataattagtcaatcc
tcccctactgagactgcagatattagggataaattggaatccttgaattctcgctggcat
attgttaacagaaagataaatgaaagaagaagaaggttagaggaagaaaagaagaagttg
tatggattacaagaagacctaaataaattctgcatttggttagaagatgcagagggcatt
gctagacaaccaacagaacctgggaatgaactgcaattgaatgagttatatgaaaaagta
aagtttacagcagaggaacttcttcctcgcaaagagttcttgaagcaactgaatgaagct
ggaggaacggcattaggaagtacaacgatatctccaaaggagaagaaaaaaattgaaagt
ggtttgaaagaggccaaccagcgctggataaaggtgtccaaagatcttcatgataagcaa
aaagagattgaggatgagttgaagaatttatcgctctttgagcttcagttgaatcagttg
actttgtgggtgtcttctgtaaaggatcagctgcagttctacaatcaagtgggcagaccc
ggtgcttttgacatcaaggaaacagaagaagcaattctagcaaaacagccacatgtagaa
ggaatcttgtctaagggacatcacttatacaccaaggaaccagctccatatgtactgaag
caaaagttagatgatctgcaaacagagtggaatactgtgaaccttttattgcaagaactg
aaaagaagaccagcagttgccgcacctggtggtggtcaaacagtctcggtggtaactcag
acattggtaacaggaagcactgtcccatcagcagatatgccatcatcacttctcttggaa
gtacctgccttggctgaattcaacaggacttgtgctgagctaactgattggcttactctg
ctagaccgtgtcttaaaggctcaaatagtgacagtaggtgacgtggaggaaatcaatgag
atgatcatcaaacaaaagacaactttgcaagatttagaaaagcggcgcccccatttggaa
gaacgtattactgcagcacaaaatctgaagaacaagacaagcaatccagaggctagagca
gtgattacagatcgcattgacaaaatacaaaatcaatgggaagaggttcagtgtcacctt
caaaacagaagactgcagctacaagaaatgctgaaggattccaaccaatggatagaggct
cgacatgaggcagatcaagttatagagaaagcaaaaaacaggactgattcatggaaagaa
atatcctacacagtagaagccctgaaaaaccagaattctgatctgaagcaattttccaag
gaactccagcaatggcagataaacgtcgacgcagcaaatgacttagctcttaagcttctg
cgtgactattctacagatgacacaaggaaagtggaactgatgaaagataacattaatgct
acttgggcaagaattaataagagggttacagaacgcgatgctgcgctggaagcagctctc
cggttactgcagcagttttatctggatttagaaaagttccttgcttggttgactgaagct
gagactactgccaatgttctccaagatgctacacataaagatggggtattagaggataca
cgtggtcttcgagaacttatgaaccagtggcagaacttgcaagaggaaattgatggacac
accgaggtttttcattccttggatgagaatggacagaaaatgctcagatccttggaagga
tcagatgatggggtcttgttacagagacgacttgataacatgaatattagatggaatgag
ctcaggaaaaaatcccttaacatcaggtctcatttagaagcaagcacagagcattggaaa
cgactgcatgtctccctgcaagagctgcttgcttggctacagatgaagaatgaggagctc
aagcagcaggcacccatcggaggagatgtccccaaagttcagactcagattgagaaccat
cgagccttcaagagggagataaaaacgaaagagcctgttatcatgaatgctattgatact
gtgagaattttcttagatgatcagccttctgaaaccatggagagaatgcaccaagaacca
aaagaagcacaaacagaagaacagttcaggaatattagcagagttctacaaaagcaagtt
gatgatgtgtcaactgaatgggacaagctgaacctgcgctctactgattggcagaaaaaa
ttagatgaggcacttcagagactgcaggagctccaagaagcaatggatgaactggaccat
aaactgcatcaagcagaggctttaaaagggtcttggcaaccagtaggagatttgttgatt
gactcacttcaggatcacttagggaaaattaagactttcaaagcagaaattgccccaata
aagaacaatgtaaaccaagtcaatgatcttgcccatcagtttgattcgactgttatccag
ctgtccccttataattttagtagacttgaagacttgaataccaggtggaaacttctgcag
gtgtccattgatgagcgcatcagacagttgcatgaagcccacagggattttggccccacg
tctcagcattttctttccacttctgtccagggtccctgggaaagggcaatctcaccaaat
aaagtgccatactacatcaaccatgagacacaaaccacctgctgggatcatcccaaaatg
acagaattataccaatctttagctgacctgaacaatgtgcgattctcagcatacagaact
gccatgaagctaaggagattgcaaaaggccttgtgcttggatttgctagggctgtctgca
gcttgtgaagccttggaccagcacaacctgaagcagaatgaccagctgatggacatcctg
cagattattaattgcttgaccacaatttatgatcgactggagcaagagcacaataatctg
gtgaacgttcctctctgcgtggacatgtgcctcaactggctgctgaatgtttatgacacg
ggtcgaacgggacgtatacgcgtcttatcttttaaaactggtgtaatttccctgtgtaaa
gcacatttggaagataagtacagatacttattcaagcaggtggcaagctccacgggattc
tgtgaccagcggagactgggcctgcttttacatgatgcaattcaaattccccgacagctg
ggagaagtggcctcttttggcggcagtaacattgaacccagtgtccgaagctgctttcag
tatgctaataacaaaccagaaatcgaagcagctctgtttctggattggatgaggctggaa
ccgcagtcaatggtgtggctgccggtgctccacagagtagctgctgctgagactgccaaa
caccaagccaagtgcaacatctgcaaggagtgtccgattattggattcaggtaccgaagt
ttaaagcactttaactatgacatctgccaaagctgcttcttttctggccgagttgcaaaa
ggtcacaaaatgcactacccaatggttgaatattgcacgcctaccacatctggagaagat
gttcgggattttgcaaaagttttgaagaataaattcagaacaaaaagatactttgctaag
cacccaaggatgggatatttgcctgttcaaactgtcctagaaggagataacatggaaact
cctgttactctgatcaacttctggccagtagattctgccccagcctcatctccccagctt
tcacatgatgatacacattcacgaattgaacattatgctagcaggctagcagaaatggaa
aataccaatggatcctacctaaacgatagcatttcacctaatgaaagcatagatgacgag
catttgctcatccagcactactgccaaagcttgaaccaagaatcccctctgagtcagcct
cgcagccctgctcagattcttatttctttggagagtgaggaacgaggagagcttgagagg
atccttgctgacctggaagaagaaaacaagaatttgcagtcggaatatgatagattgaag
gagcaacatgatcacaagggattgtctcctctgccttctcctcctgaaatgatgccatcc
tccccacagagccagcgggatgctgagctcattgctgaagccaagctactacgccagcac
aaggggcgcttggaagccaggatgcagatcttagaggatcacaacaaacaattagaatcc
cagttgcatcgactgagacagctgctggagcaaccgcaagcagaggcaaaggtgaatggt
acaacgtattcttctcctacttcctcgctgcagagatcagagagcagccagcctatgttg
cttcgtgtagttggcagtcagacatcagaaagcatgggtgaggatgatctcctcagccct
cctcatgactcaagcacaggcctagaagatgtgatggaacagctaaacaactccttccca
actgcaagaggaaccaatgtaggcagccttttccacatggcagacgacttgggcagagcg
atggaaaccttagttactgttatgaccgatgacgaggtgttagagtga
DBGET
integrated database retrieval system
