Xenopus tropicalis (tropical clawed frog): 105947166
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Entry
105947166 CDS
T01011
Symbol
nup160
Name
(RefSeq) nuclear pore complex protein Nup160 isoform X1
KO
K14303
nuclear pore complex protein Nup160
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105947166 (nup160)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xtr03019
]
105947166 (nup160)
03036 Chromosome and associated proteins [BR:
xtr03036
]
105947166 (nup160)
Messenger RNA biogenesis [BR:
xtr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
105947166 (nup160)
Chromosome and associated proteins [BR:
xtr03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
105947166 (nup160)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_NUP160_120_M
Beta-prop_Nup120_160
TPR_Nup160_C
NUP160_helical
HEAT_Nup120
TPR_2
Motif
Other DBs
NCBI-GeneID:
105947166
NCBI-ProteinID:
XP_031756356
UniProt:
A0A8J1JI67
LinkDB
All DBs
Position
4:15977665..16006762
Genome browser
AA seq
1439 aa
AA seq
DB search
MAAAESHMTSFQAEDWAGSNILPMVQRAGGSTRGIMAASVNLERSYMELIGAERETSRRN
FRDLSLRPDVSLVIGGPKYSDCAGGYCYNESGSLLSATRNRFIHWTSYADTLELVELSLD
INLLNNAVRLKILNCSILPGGVHICETQNNIIVLILTNQTVHRLILPHPSRMYRSEIISD
SHIQSIFTDIGKTNFHDPNNTYVIPAIPGRAPNSTASTAWLSSDGEALFALPSVSGGILV
IKMPPRDMEGLVTIAELKQSSVMQRLLTGWMPSSIRGDPGPAHLPVSLAVHTLDHDSYLF
ALCQDHKLRMWSYKDQMCLMVADMLEYVPVSKDIRQTAGTGHKLRLAYSDTLEILYLGVY
LHTPRQGQFCVFQLVCTESNRYSLEHTSSIFTNQETLIDFTFTLSSMNIWALWLDDDNQT
VMKHINFERNQAGHWNPVFVNPLPDDDLAIGDEQEPQEAYLECLFAPGRFTIAALQKAIQ
ILRKGSGRVLDLSWEELKKEVTLTVEKEIQNAVVDYDVSQEEFRQINIENWCKFYTCCLQ
YQETLSRPLALVVHPNTNMVCLLRKGFLSFLAPCSSVEHLYLVPGEHLLTVDESVICDDV
DGASDIVSLIQCLHMIADYITEDMAYQMESACCHPQSPERVAEQILEDLIANDIDNIMEN
IQNKLQDIRNPIQAISFLLQNMDYETNMDMEQSQHNVRLNLSTLYGSVTASSVVCQAIYK
ISATRFLICRDLLILQHLLLRLGDMALVGAGQLLHSQQELIPRAAQLLLSYYMIRWGSQC
LACAVPVDLLESNLQHLSVLELSDSQVEKRRYTSGIQTIVELFFEDVGRKHFPQVFAHLF
IQSGSSQVHRSLNWADLIHRITSYLLQLLWPSNPNFQFAECLMRNCQYTQLQEYVRLLLP
WCQVNVGSCHFMLAQCYLVAGEGHKALDCFSQAASEVEREDFLEKLIRVEEGESVSPRLQ
YYNRVLRLLEDVGLPELVIQLATIAISEASDDWRSQAALRTRIFKHHLDMGHNSQAYDAL
TQIPDTSRQLDCLRQLVVVLCERSQLQDLVEFPYVNLHNEVVGIIESRARAVDLMTHNYY
ELLYAFHIYRHNYRKAGTVMFEYGMRLGREVRTLRGLQKQVNSYLACLNCLRLIRPEYAW
IVQPVSGAVYERPGASPKRNYDGESSAVPSSSQIEILELRDLEKEYVLAQTRLTLAKHNP
STAAIAGSSAAEEMVALLVQAGLFDTAISLCQTFKLGLTSIFEGLACKCIRLQQGGEAAQ
AEAWEWLAANQLATVITTKESSATDEAWRLMISYLDKYESKNTLYHHCIINKLLSHGVPL
PNWLINRYKAMDAAELLRLYLKYDLLEEAAELVLEYVDALLGKGHQYFGIQAPLSATSQL
VWFPYSAIDHLRLALGENENNQHNQAILGKLQRKMDEYFQKLKKATDDYKKIVQKPVRA
NT seq
4320 nt
NT seq
+upstream
nt +downstream
nt
atggccgcggccgaaagtcacatgacatcttttcaagcagaagattgggcgggaagtaat
attcttcccatggtgcagcgcgctggcggctccacacggggaatcatggcggcctctgtg
aatctagagagaagttacatggaattgattggtgccgagcgggaaacgtcaaggaggaat
ttcagggatttgagtctgcgcccagatgttagtcttgtgattggaggcccaaaatacagt
gattgtgccggtggttattgctacaatgaaagtggcagtctcctgtcggctacaaggaac
aggttcatacattggacttcctatgctgatacattggagctggtggaactatcccttgat
attaaccttttgaataatgctgtccgtctcaaaatactcaactgcagcattttgcctgga
ggggttcatatttgtgaaacacaaaacaatattatcgtcttaattttaacaaaccaaaca
gttcacagattgattctgccacatccctcccgcatgtacagaagtgaaatcatttcagac
agccacattcaatcaatatttactgacattgggaagaccaatttccacgatcccaacaac
acctatgtgattccagctattcctggacgagcccccaattctactgcttccacggcatgg
ctaagcagcgatggagaggcactgtttgcgctcccctctgtttcaggaggaattcttgta
attaaaatgcctcctcgtgacatggaaggacttgtgaccattgcagaattgaaacaaagt
tctgtaatgcagcgacttctcacagggtggatgccttcatctatacgaggtgacccgggt
ccggcgcaccttcctgtaagccttgcagttcatacacttgatcatgattcctacctcttc
gctctgtgtcaggatcataaactccgcatgtggtcatacaaggatcaaatgtgccttatg
gtcgccgacatgttggaatatgtgccagttagcaaagatatccgtcaaacagctgggaca
ggacacaaactgcggcttgcctactcagatacattagaaatactttaccttggggtatat
ttgcacacacccagacaaggacagttctgtgtattccagttggtgtgcacggaaagcaat
cgctacagtttggagcatacttcctcaatattcactaatcaggaaactctcatcgacttc
acttttactttatcttctatgaacatttgggctttgtggctggacgatgacaaccaaaca
gtcatgaaacacataaattttgaacgaaaccaagcaggacattggaacccagtttttgta
aatccattgccagatgatgacttagccattggtgatgaacaagaaccccaggaagcctac
ctggagtgtttgtttgcaccaggacgattcactattgctgctctacagaaagcaattcag
atcctaaggaagggctctggaagggttctagatctctcctgggaagaactgaaaaaagag
gtcactttaactgttgagaaagagattcagaatgccgtggtagattatgacgtgtcacag
gaggaattccgccaaataaacatagagaactggtgtaaattttatacctgttgcctgcag
tatcaagagactctttcacgtccccttgcccttgtggtgcacccaaacactaacatggtg
tgccttctgagaaagggctttctatctttcttggctccttgttcttcggttgagcatctc
taccttgtaccaggagagcacttgctaacagtggatgaaagtgttatctgtgatgatgtg
gatggcgcgagtgacattgtcagcctgatacagtgccttcacatgatagcagattatatt
accgaagacatggcatatcagatggagagtgcgtgctgccacccacagtcaccagagaga
gttgcagagcagattttggaagatttgatagccaatgacatagacaacatcatggaaaat
attcagaataaactgcaggacatcaggaatccaatacaagctattagtttcttgcttcaa
aatatggattatgaaaccaacatggacatggaacagtcgcaacataatgtgagactgaat
ctttctactctttatgggagtgttactgcttccagtgtggtatgtcaagccatttacaaa
atctctgccacaagattcttaatatgtcgggacttgcttattcttcagcacctcttgctg
aggctaggggacatggcactggttggagcagggcagcttcttcattctcagcaggaactt
atccctcgcgccgctcaactgcttttgtcctattacatgatccgctgggggagccagtgt
ttggcctgtgctgtcccagtagatttattagagtccaacctgcagcacctctcagttttg
gagctttctgattctcaagtagagaagcgcagatacaccagtggaatccagaccattgtg
gaattgttttttgaagatgtaggaagaaaacatttccctcaagtttttgcccaccttttc
attcaatctggttcaagtcaggtgcacagatctttaaactgggccgatcttatacatcgc
attaccagctacctcctacaacttctatggcccagtaaccctaacttccagtttgcagaa
tgcctgatgagaaactgccaatacacacagctccaggaatatgtccggctgcttttacca
tggtgccaagttaatgttggttcctgccatttcatgttggcccagtgttacttggttgct
ggagaaggacacaaggctttagattgtttcagtcaagcagcctccgaagtggagagggaa
gactttttggaaaaattaatcagagttgaggagggggagtctgtgtcacctcgcctccaa
tattataacagagtgttgcgtctgctggaagatgtaggtttgccggagctggtgattcag
ttggctactattgcaataagtgaagccagtgatgactggaggagtcaggcagcattaagg
actcgaattttcaaacatcacttagatatgggacacaacagccaagcatatgacgcttta
actcaaatcccagatactagcaggcaacttgactgtttacggcagctggtggtggttctg
tgtgagcgctcccagctgcaggaccttgtagagtttccctatgtaaatctacataatgag
gttgtaggtatcattgaatcccgtgcccgtgctgttgatctgatgacccacaactactat
gaactcctatatgcgttccatatataccgacacaactaccgaaaagctggcacggtgatg
tttgaatatgggatgcgacttggcagggaagtccgtaccttacggggtctccaaaaacaa
gtgaactcttatctggcatgcctgaactgcttgcgccttatccgtccagaatacgcttgg
atagtgcagccggtatcgggagctgtgtatgaacgcccaggagcatcccccaagaggaac
tatgatggagaatcatctgctgttccaagcagtagtcagattgaaatcttggagctgcga
gatttagaaaaggaatacgttcttgcgcagacgcggctgactctggcaaagcataatccc
agtacagcagcgatcgcagggagttccgctgctgaagaaatggtggctcttcttgtacag
gccggcctgtttgacacagcaatatccctgtgccagacgttcaaacttggcctgacatca
atcttcgagggtcttgcttgcaaatgcatcaggttgcagcagggcggggaggcagctcag
gctgaggcatgggaatggctggcagccaatcaactggcgactgttattactaccaaggag
tccagtgctacagatgaagcatggcggttaatgatctcctatctggataaatacgagtca
aagaacacactgtatcatcactgtatcataaataaactgctgtctcacggagtccctctg
cccaactggttaataaaccgttacaaggctatggatgcagcagaactgctccggctttac
ctcaagtatgacctgctggaagaggctgcagagctggtgttagaatatgtagacgcactt
ctaggcaaaggccaccagtattttggaatacaggctcctctctctgcaacgtctcagttg
gtctggttcccttattcagctattgaccatctccgactggctctgggcgagaatgaaaat
aaccaacacaatcaggccattctgggcaaactccagaggaaaatggatgaatatttccag
aagctgaagaaagccaccgatgactacaaaaaaatagtgcagaagccggtacgggcgtaa
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integrated database retrieval system
