Xenopus tropicalis (tropical clawed frog): 105947355
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Entry
105947355 CDS
T01011
Name
(RefSeq) chitin synthase chs-2-like isoform X1
KO
K00698
chitin synthase [EC:
2.4.1.16
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr00520
Amino sugar and nucleotide sugar metabolism
xtr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
105947355
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
xtr01003
]
105947355
Enzymes [BR:
xtr01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.16 chitin synthase
105947355
Glycosyltransferases [BR:
xtr01003
]
Polysaccharide
Structural polysaccharide
105947355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Chitin_synth_2
Glyco_trans_2_3
Glyco_tranf_2_3
Motif
Other DBs
NCBI-GeneID:
105947355
NCBI-ProteinID:
XP_031758804
UniProt:
A0A6I8QD06
LinkDB
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Position
5:55363982..55386510
Genome browser
AA seq
1250 aa
AA seq
DB search
MNGNSETSQNKRHRLKKSWDPFLVTPVCEEEEKTGRCVLIFSMVVWALAGLLVLASGFFS
KVSLLFVVAMTNEDSLNLSNKPFGTLIIGIMLVIPSILTFIKSMWKLIFTHSPSPHKCDV
FTVCIIEALVALGSAMLVVVAMPHFNIISNLMILSSVYTIPSAVQIINRARSPNWKMSIP
IISLVLLIIGHILFCMGYLLETGYSLQIYVSIAIVATILVSLTWFENLLLLLQKTTFHHV
EPEHDTRNVLYICSSVVRIAVTAAVVGSCVPLSRHDWTQLKSIAPKDLQLLLILLAIQAV
TSATCHWFGVIACKMHYVKRGFAGPLIMTTPAVCIALFIVFIDQYRVAAENFGNSGDFNI
TIFCQNLKLSDKNSMVQNLLLEVGQSMCKTLMELNTPNIVMLFISGIAWYLGFVLCTLYV
WKLKVQRIERTTQLFVRRLYEAAYIDQSMLLNTRYKLESKEKFESKENQSSADKVMVYLC
ATMWHETFDEMLKILTSLFRLDKYKSNKKDTLNLEAHIFFDDAFTEDIDTQTGKKKRHVN
VYVEYLISAFEEVHRVFACNRTDVFSGNNISGCTQQKIMMTPYGGRLCYILPHGNLLYVH
LKDKQRIRHKKRWSQIMYMFYLLGWKLYRKYDNLAEKALNPIEKEQVYKELEKEKHNTYV
LALDGDTDFQPSSLLLLVDRLKRYPGVGAACGRIHPTGMGPMVWYQKFEYAVGHWLQKSS
EHVFGCVLCSPGCFSLFRASALMDDNVLKKYSTKAAEAAHYVQYDQGEDRWLCTLLLQQG
WRVEYNAASDAYTNAPQEFVEFYNQRRRWGPSTMANTLDLLHTGVQTAKKNPSLSLLYIL
YQTLFMGASILSPATVCLMIAGAFSFVFGLGTNLSLFLAVLPPAIYILICFVTKPNTQIT
VAAFLSVGYAFLMTATFLSIIGGIVENNTILTPTGIFLVSMGLIYIITALLHPKEFSLLI
YGLLYIICVPSGYLLLTIYSLVNMHIVSWGTRESAAPKTEKKEDNKKVKYQKTCNCFCCV
VEVQVHEKKSTDSEKTENKESDDSSLMAAQSQENKSLMTKQEEFVYEEGWITQLQEKSSY
NVLQKEDLPEEEIPFWEDVIKSYLEPLKEDKHKQDEIERDLKSLRSKVTFVFFMINLLWI
VATFFLQLIGSTVSIHYPKVYYNGTVSTTEFFMVEPVGLMFLLSFAMLLILQFLGLIYHR
IYTLIHFIAYTETEKHVKHKIQDPAGQDEIKTMETDLNVYENPGAIKEFV
NT seq
3753 nt
NT seq
+upstream
nt +downstream
nt
atgaatggaaattctgaaacatcccagaataaaagacataggttaaagaaaagttgggat
cctttccttgtaacaccagtgtgcgaggaagaagagaagactgggcgatgtgttcttatc
ttcagcatggtcgtctgggccttggctggacttctcgttctcgcatcgggattttttagt
aaagtatctctcttgtttgtggtggccatgacaaatgaagactcactgaatctttcaaac
aaaccatttggcacccttattattggtattatgctggtgataccaagcattctcacgttt
ataaagagcatgtggaagttgatcttcacacattcccccagtccccataaatgtgatgtg
tttacggtttgcattattgaagcccttgttgcacttggatctgcaatgctcgttgtggtg
gccatgcctcatttcaacattatcagcaatctcatgatactgagcagtgtttacacaata
ccctcggcagtgcaaattattaatcgggctagatctccaaattggaaaatgtcaattccg
ataatttctcttgttttactcataatcggccatatattgttctgcatggggtaccttttg
gagacaggttacagtttacaaatatacgtcagcattgccatagtggcaaccattttagtg
tcattaacctggtttgaaaatttacttctccttcttcaaaaaacaacatttcatcatgta
gaaccagaacatgatacaagaaatgtcctttacatatgcagtagtgttgttagaattgca
gtgacagcagctgtagtaggaagttgtgttcctctgtcacggcatgactggactcagcta
aagtccattgctcctaaagatctgcagttgttgctgatcctgctagctatacaggctgtg
acttctgcaacctgccactggtttggggttattgcatgcaaaatgcattatgttaaacga
ggttttgctgggcctttaattatgaccacacctgcagtttgcattgccttgtttattgtt
tttatagatcagtatagggtagctgcagagaactttggaaactcaggggattttaacata
accattttttgtcagaatctcaaacttagcgacaagaacagtatggtccaaaatctactt
ttggaggttggccagagtatgtgtaaaacattaatggaattaaacaccccaaatattgtt
atgttattcatatctgggatagcctggtacttggggtttgtcctgtgcacattgtatgtt
tggaaattgaaggtgcagcggatagaaagaacaacccagctgtttgttcggcgcctttac
gaagctgcttatattgatcagtcaatgctgctaaatacacgatataagttagagagtaaa
gaaaagttcgagagtaaagaaaatcaaagttcagctgacaaggtcatggtgtatttatgt
gctacaatgtggcatgagaccttcgatgaaatgctaaaaattctcacgtcgctattcaga
ttagacaaatacaaatcaaataagaaggatactctgaacttggaagcacatatttttttt
gatgatgcgtttactgaggatatagacacccaaactggcaaaaagaaaagacatgtcaac
gtgtatgtggaatatttaatctctgcatttgaagaagtccacagggtttttgcatgcaac
aggacagacgtgttttcaggaaataatatctctggctgcacacagcaaaagattatgatg
actccttatggtggaagactttgctacatccttccacatgggaatctcctttatgtacat
ctgaaggataaacaaagaattcggcataagaagagatggtctcagattatgtacatgttc
tatctactgggatggaaactatatcgtaaatatgataatttagctgagaaagccctgaac
cccattgagaaagagcaagtctataaggaactcgagaaagagaaacataatacttatgta
ttagctctggatggagacactgattttcaaccatcatccttactgttacttgtggatcgt
cttaaaaggtatcctggtgttggagctgcctgtggaagaatacatccaactggaatggga
cctatggtttggtaccagaaatttgagtacgctgttggacactggcttcaaaagtcctca
gaacatgtctttggttgtgtcctttgtagtccaggatgctttagtttattcagagcatct
gcattaatggatgataatgtactaaaaaagtacagtacaaaagccgcagaagctgcacat
tatgttcaatatgaccaaggagaggatcgatggctctgtacattgctcttacagcaaggc
tggcgtgtggaatataatgctgcgtcagatgcttacacaaatgctccacaagagtttgtg
gaattctacaatcaacgaagaagatggggaccctctaccatggcaaataccttggaccta
ctacatactggagtgcaaacagccaagaaaaatccatctctctcactcctgtatatcctg
taccagacattatttatgggagcatcaatattaagtcctgcaacagtttgtttgatgatt
gcaggggcattctcttttgtctttggacttggtacaaacttaagtttatttttagcagtt
ttgccaccggctatatatattttaatttgttttgtgacgaagcccaatacacaaataaca
gttgctgcatttctcagtgttggatatgcattcttaatgacagctactttcctaagcatt
ataggtggaatagtcgaaaacaatacaatcctgacacccacaggcatattccttgtatcc
atgggcctaatatacatcatcacagctttgctgcatccaaaagaattctccctgctcatc
tatgggcttctctatattatttgtgttcctagcggctaccttttgttaacgatatactct
ctcgttaacatgcacatagtgtcttggggtacaagagagtcagcagccccaaaaactgaa
aagaaagaagacaataaaaaggttaaatatcaaaagacatgtaattgcttttgttgcgtt
gttgaagtacaagtccatgagaagaagagtacagattctgaaaagacagagaataaagaa
agtgatgattcgtcactgatggctgcacaaagtcaagaaaataaaagtttgatgacaaag
caagaagagtttgtctatgaagaaggttggattacacaactgcaggagaaatcaagctac
aatgtgctgcaaaaagaggacctaccagaggaggaaattccgttttgggaagatgttata
aaaagttacttggagccactcaaggaagacaaacacaaacaggatgaaatcgagagagac
ctaaaatcattgagaagcaaagttacatttgttttcttcatgattaatttgctgtggatt
gttgcaacattcttccttcagctcattggatccactgtcagcattcattacccaaaagtt
tattacaatgggactgtttcaaccactgaattcttcatggtggaaccagttggattaatg
tttttgctgtcatttgccatgttgcttatactacagtttctgggacttatataccacagg
atctacaccctgattcacttcattgcctacacagaaacagaaaagcatgtaaaacacaag
atacaagaccctgcaggacaagatgaaattaaaaccatggaaacagacttaaacgtttat
gaaaaccctggtgcaataaaagaattcgtatag
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