Xenopus tropicalis (tropical clawed frog): 105947707
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Entry
105947707 CDS
T01011
Name
(RefSeq) oocyte zinc finger protein XlCOF6-like
KO
K09228
KRAB domain-containing zinc finger protein
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
105947707
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
105947707
Transcription factors [BR:
xtr03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
105947707
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_6
zf-C2H2_jaz
zf_UBZ
C2CH-3rd_BIRD-IDD
zf-C2H2_11
Zn-ribbon_8
Motif
Other DBs
NCBI-GeneID:
105947707
NCBI-ProteinID:
XP_031760215
UniProt:
A0A803JXW2
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Position
6:complement(6060275..6064968)
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AA seq
828 aa
AA seq
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MDKCRLSRGSRDPQLLGFPVVQLERIQFHSGKYKTMSEDFKRKEQQILIGLHLKNKEERR
RLSAAGYRLVPYGSGITEMNRERREGLGARKQTGSDTNRKFPTCNGFVARSAHSNQPPVL
QKPHAQEMNSAPKAQQNQMPQLCTVTGGKLIVTPKLTKHTQPDAEEKLHGSQKKINNNSG
KIQYSTVHQTRKALAQSTKQTVFPKPFGVINPFVCVKCKRRFGSNGNLLIHQRIHTERPF
SCTDCGKCFSQRTILREHRRAHMGKGPFPHSTGGNKIPSGKGNFQRHQGASAKGKPLTCT
ECGKSFKYKSELQKHERTHTGEKPYVCTQCGKGFSHKANLNTHSVIHSRKKPFTCTECGK
GFITKQPLLEHFLIHTGEKPFACPECGKCFRLKEFLTSHLLTHTGLKPYTCTECGKSFAN
RGNFYRHCHLHTGNKPYSCTECGNCFATKIELQRHRLVHTGEKPFVCRECNSSFARLVNL
RSHQQLHTGEKPYKCTECGKCFRMRSHLESHKKTHTGIKAFVCAECGKQFTHKHSLRHHQ
LMHTGEKPFVCNECGKSYRQKRSLNAHLRVHTGEKPFACTECNKTFQSISWLQSHKQTHT
GLKPYQCNECGKSFLMKGNLKVHQQRHIGEKPYTCAECGKSFTTKGSLHKHSDTHTGIKP
YTCTECGKCFGGKNELKCHQSIHTGEKPFECTECGKHFASRSKLNNHQKIHTGEKPFECT
ECGKHFASRSKLNNHQKIHTGEKPFECTECGKSFCYRWHLTAHQRIHTGIKAFVCTECGK
QFPAKHRLQQHQLIHTGEKPFVCTECGKSYRHKRNLNIHMNSHTGEKL
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atggacaaatgcagactcagccgtggctcccgggatccccagctgctgggtttcccagtg
gttcagttggagaggatacagttccattctgggaaatataagacaatgtctgaagatttt
aaaaggaaagagcaacaaatactgattgggcttcacctgaagaacaaggaggagaggagg
agactcagtgctgctggatacagactggttccatatggatcaggaatcacagagatgaac
agggagaggagagaagggcttggtgcaaggaagcagacaggaagtgacacaaacaggaag
ttccctacatgcaatggctttgttgccagatctgcccacagtaaccaacctccggtgctt
cagaaacctcacgcccaggagatgaattctgccccaaaagcccaacagaaccaaatgccc
caactttgcacagtaactggggggaagctgattgtaacccccaaattaacaaaacacaca
cagcctgatgctgaggaaaagctacatggaagtcagaaaaagataaacaataattcaggc
aaaatccaatattctactgtacatcagacaaggaaggcattagcccaaagcacaaagcaa
actgttttccctaaaccatttggggttataaatccgtttgtctgtgttaagtgcaagaga
aggttcggcagcaatgggaacctcctcatccatcagcgcattcacacagagagaccgttc
tcttgcactgattgtgggaaatgtttctcccagagaaccatcctccgagagcaccgccgg
gctcatatgggaaaggggcccttcccccacagcactgggggcaataaaatcccatcaggt
aagggcaactttcagaggcaccaaggggcgagtgctaaagggaaaccacttacctgcact
gagtgtgggaaatcattcaaatacaagtctgagttgcagaaacatgaacgcacacacacc
ggggagaaaccttatgtttgtacccaatgtggtaaaggcttttcccacaaggcgaatctt
aatacacattcagttattcattctagaaagaaaccatttacctgcactgagtgtgggaaa
ggatttataacaaaacagcctctgcttgagcacttcctgattcacacaggagagaaacca
tttgcctgtccagaatgtgggaaatgtttccgactaaaggagtttcttacaagccacctt
ctgactcacactggattaaagccatatacctgtactgaatgtgggaaaagttttgctaac
aggggaaatttttatcgacattgtcatcttcacactgggaataagccctattcctgtaca
gagtgtggaaactgttttgcaacaaagattgaactgcaaaggcaccgcctcgtacacact
ggggagaaaccatttgtctgtagagagtgtaattcaagctttgcaaggttagtaaacctt
agatcacaccaacagcttcatacaggagagaaaccatataaatgcactgagtgtgggaaa
tgtttccgtatgaggagccatctagaatctcataagaagactcacactgggattaaggct
ttcgtctgtgcagagtgtgggaaacagttcactcacaaacacagcctccgccatcaccag
ctgatgcacactggagagaaaccatttgtctgcaatgagtgtgggaaaagctacaggcag
aagaggagcctaaatgctcatctacgagttcacacaggagagaaaccctttgcctgtaca
gagtgcaataaaaccttccaatcaataagttggcttcaatcccacaaacagactcacact
ggcctgaagccctatcagtgtaatgagtgtggcaaatccttcttaatgaagggaaatctt
aaggttcatcagcagcgacatataggagaaaaaccttatacctgtgccgagtgtgggaaa
agttttaccacaaagggaagcttacacaaacacagtgacactcacactgggataaagcca
tacacctgtacagagtgcgggaaatgttttggaggaaagaatgaactgaaatgccaccaa
tctatccatactggggagaaaccatttgagtgtacagagtgtgggaaacattttgcatct
cgttcaaagctcaataaccatcaaaagattcatacaggggagaaaccatttgagtgtaca
gagtgtgggaaacattttgcatctcgttcaaagctcaataaccatcaaaagattcataca
ggggagaaaccatttgagtgtacagaatgtgggaaaagcttctgttatagatggcacctt
acagctcaccagcggattcacactgggattaaagcttttgtctgtaccgagtgtgggaaa
cagttcccggccaagcacagactccagcagcaccagctgattcacaccggtgagaagccg
tttgtctgtactgagtgtgggaaaagctacaggcacaagaggaacctaaatattcatatg
aattctcacacaggagagaaactttaa
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