Xenopus tropicalis (tropical clawed frog): 105948404
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Entry
105948404 CDS
T01011
Symbol
tdrd6
Name
(RefSeq) tudor domain-containing protein 6 isoform X3
KO
K18405
tudor domain-containing protein 1/4/6/7
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xtr03036
]
105948404 (tdrd6)
Chromosome and associated proteins [BR:
xtr03036
]
Eukaryotic type
Gene silencing
piRNA pathway
105948404 (tdrd6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
SMN_Tudor
Motif
Other DBs
NCBI-GeneID:
105948404
NCBI-ProteinID:
XP_017949976
Xenbase:
XB-GENE-5969988
UniProt:
F6PM47
LinkDB
All DBs
Position
5:complement(146957806..146991325)
Genome browser
AA seq
2418 aa
AA seq
DB search
MAARRRDTKAATVAPDVIMLPAPGLPVPGTVLKLSVSSLDVFAEVPFVRLWSGLVECRKE
YEALESEVQAAAVGGPLGAGDWSPAVGHWCLAEIDGRWHRCQLLHRKGFEYFAFLIDAGY
TVPARAHQLREAPQALFGLPGEVQGYLLSNLVPQEQRAWSGQALEYLSSLQGQQVEGVVE
ELILPHGLVLLEVSAISKRLLDLGLAKPFPAASFRSLIDTYFAGGHSSAQTKTFPSVQPS
AQSNPMAQVNPRRAWVLDYFYPQFQVGVIEPVLVTEVSNPHRIFCQLRSLSHEVQRLSDS
MHHFYELQSGCGERNYIQPLIPGQPCACRGSDGHWYRSLLQEYYPDKKLAMVIHVDWGRK
DIVSMNCLRTLAADYFRMPVVTFPCSLYGVSDGGVAWDPAIIMELRNMFQGKQFSAKIDF
YNSYEHMYVVTLYGDDGVNLNCVFGTRAQSFSFSQAQKPLSQDLGESQEDVKSLPQTPPE
AFYVPTVPVAELNISTFYDVLVEFVADPSNFWIRTGENATKYSEMMEQIAALYSKASKLD
GIMTTPMAGQLCCTKFKDDRFYRAEIVAIKGKMVEVYFIDHGNTELVDWYNVKKLPAELG
EMPGLAIYCSVADTYPLGDSWSPEAILAFKMAVVDKRLVIYVLSKEHNKYIIEVLDNSRI
EQRSVGKILSAVGHAKYEEVEPVAQHPGTTSDIDRKMQQQFSGHLNKDISLLKARQKEVV
CSVQENKSEPYSPFEDQFFEPGTTIEVVVSCIINPSLFWCQNALHSAKLEKLMAKIQDIC
LNAGCSYERGACACLAKSSCDGRWYRAFIVNEMPAGKASSDHVEVLFVDYGIRETVSLKD
LRCMESELFGLKAQAFKCSLYNIIAPDGENPFEWDAITTLSFNRFVDSFSKKTTEFKCTF
FATASFKKELFNVVDVFTPFASICKLLVEQGHAKQLSHRTLVPSVQLQTYYYSTHDIKIG
GEEEVYITYVNSSLEFYCQLSRNTETMDMIASATTRVCNEVKKFQLSPGSLCLAKFSDQQ
WYRCFTNFNKNSTDVFFVDYGNTEKLTKEELLPIPSDAYELLHFPMQAIKCSLSDIPDTI
PREVVLWFENLILDKPLKALIVAKETDGKLIVELYDGSQQINSSIKAKLGLKNPRTEGYF
GNAEKRHQLNDLDKGGRPDSAFKLYNQGSKFSSDLDNHSQNGFTHQKSASFVAKERDQFE
QKPNLRTSRPYIQDREVYSVRKNISQSGYAPHKTGEFRSKDREALEQRPNLKTSGMYSQG
REVSMSQNGSNSGFPPKKTGGFRSKEREVSEHKQNPDAFKGYNQESKMSPQLRNGSQMEA
SWSSESDRSSEHKPEINASQQRRSTFQECKSIPPLTKLSDLPKQNITPGFKSSVYISHTN
TLSDFYVQIAQDTELSNISEILNNEKKPSDRLDEKDVNLGDLICAFFEDDGLYYRAVITE
KHSDGLQVQYIDYGNTLTIPASQIYKLPPSLSSAPVMSIFCALDKCTTAACEQNMDDLMV
KFSERTGDLELSCEFVQCNNLKWNVILCDDQGCINDLFISASDPLLNPPSLEEPDVTSEQ
LNGVSHYVWNLPALGERVEAYASAVDSPEHFWCQLVTADVDSLAVKVQEAGERSVHDGKF
STEIEVGSPCNVIYSEDNHWYRAAVTKIEADQVTVRFVDYGNEEMLHLEQVRRLPADLAT
IPAQAFSCSLAGFNLSEGCWNSDANTFFYENVTEGLLVISVLHIQELGPCKIPQASVNVS
YNGENVNTKMRQFWQDSNEIPTPFLESLHAEEIIKDNTIPSQAVEDVADQSEQSEEPCAS
ELTETPTVPTMYSNADGEEVTAIDETKLEALPLSSTDEAAESTENTDVDLMRTECLLPEI
QKSSDLSCLELTLDEDVPGSAVTPLAPEDLCIDYDESNIKESYSDITAMDQGELHHTEDI
DLWTPAAHDQEIASSEIIDNVPIDKECDYSVQEPTEESSASTGLEEGPAPEKNAFTENND
GLEPEAANLQSKGEEYLVPEESTVAVCESEDFEPEVDVDLPRKENEDLPAYTYIPIPEDD
GDGLGSPKEATSHEIGDAEGLGEQNQELLDHTISECTNDDFDDLPSKEQEGIPLHSDADT
DFAGTEDVPRDMKGDIEATGSQNKEDVTLGEDPATETEYRSYFLKAEDVDRPSQEHKDFA
GQEENPVAEYINDISEPEFADLQSEEQGDTVTYTDTPFLEGGVDDFGSTEAKSRDNTYEH
VTEDVEDLNTENQESQVHDVSSDKLFKESGPTDLQDQVELQYTEPADSVCDVHQSEECEF
AAHFDEIIESHSPEHPVLVDSTVDACEREVADLCYLPDKVESECTVAEDSTKDMHQNKEY
QCVFDPVENIESQTQECPLPADTLDNEYTCTGNETESANMENIEFQEKPVVFGMEQPGSD
VYGQGVHVLESPTHYLPL
NT seq
7257 nt
NT seq
+upstream
nt +downstream
nt
atggccgccagacggcgcgatactaaagctgctactgttgcgcctgacgtcatcatgctc
ccggcccctgggctgccggtaccgggtacagttctcaagctaagcgtatcgtccctggac
gtgttcgccgaggtgccattcgtgcggctgtggtccggccttgtagagtgcaggaaggaa
tacgaagcgttggagagtgaggtacaagcggcggctgtaggggggcccctaggggcggga
gactggagcccggcggtaggccactggtgcctggctgagatagacggacgctggcaccgc
tgccaattgcttcaccgtaagggcttcgagtactttgccttcctgatagacgcgggttac
acggtgcctgcccgggcccatcagctgagggaagccccccaggccctgtttggccttccc
ggggaggtgcagggctacctgctgtccaacctggtcccccaggagcagagagcctggagt
gggcaggccctagagtacctcagctccctgcaaggccaacaggtggaaggagttgttgaa
gaacttatcttgccccatgggttggtgctattagaggtgtcggccatctccaagcgccta
ttggacctgggcttagccaagcctttcccagccgcttcattccgttctctcattgacact
tactttgccggcggccatagctcagcccagactaaaacattcccaagcgttcaaccgtct
gcccaatcaaatcccatggcgcaagtcaatccccgccgggcttgggttttggactatttc
tacccgcagttccaggttggcgtgatcgaacccgtgctggtcaccgaagtctccaatccc
caccggatattttgtcagctgaggagtctgtctcatgaagtgcagaggctttccgacagt
atgcatcatttttatgaattacagagcggttgtggggagcgcaactatatccagccgttg
attcccggccaaccctgtgcttgccgcggctctgacggtcactggtatcgctcactcctg
caagagtactacccggataagaagctcgctatggtcatccatgtagactggggtcgcaag
gatattgtttccatgaactgtttgcgcacgctggcagcagattacttccgtatgcctgtt
gtgactttcccttgctccctgtatggagtgtcggatggaggcgtggcttgggatcctgcc
ataataatggagctgcgcaatatgttccaaggcaagcagtttagtgccaaaatagacttc
tataattcatatgaacatatgtatgtggtcaccctgtacggagacgatggagtcaattta
aactgtgtctttggaacaagggctcagtctttcagtttttcccaagctcagaaaccccta
agccaggatttaggcgaaagccaagaagacgtaaagagtctccctcaaacacctccagaa
gctttttatgttcccactgtccctgttgctgaactaaatatttccactttctacgatgtc
cttgtggagtttgtggctgatccttccaacttctggatcaggactggagaaaacgccacc
aagtacagtgagatgatggaacagatagctgctttatactccaaagcatcaaagctggat
gggatcatgaccacccccatggcggggcagctttgctgcacaaagttcaaagatgaccga
ttttaccgagctgaaattgttgctattaaagggaagatggtggaagtgtattttattgac
catgggaacacagaattggtggactggtataatgtaaagaagttgccagcagaacttgga
gaaatgccaggcttggccatttattgtagcgttgcagacacctatccacttggagacagc
tggagtccagaagcaatacttgcctttaaaatggctgtggtcgataagaggcttgttatt
tatgtgctgtccaaagaacataataaatacattattgaagttttggacaattccagaata
gaacagagaagtgtgggtaaaatactatcggcagtgggtcatgctaaatatgaagaggtg
gaacctgtagcccagcatccaggaaccacgagtgacatagatcgtaaaatgcagcagcaa
ttctctggtcaccttaataaagatataagtttactgaaagctcggcagaaagaggttgtc
tgctcggtgcaagaaaacaaaagtgagccgtactctccatttgaagatcaattctttgaa
ccaggcactacaatagaagtggtagtgtcatgtattataaaccccagtttgttttggtgt
caaaatgccttgcacagcgccaagcttgaaaaactaatggccaaaatacaagacatttgt
ttaaatgcaggttgttcttatgaaagaggggcttgtgcatgtcttgcaaagagttcctgt
gacggcagatggtacagagcattcatagtcaatgaaatgccggctgggaaagcaagttca
gaccacgtagaagtcctttttgtggactatggcatcagagaaaccgtttccttgaaagat
ctccgctgcatggaaagtgagttgtttggtttaaaagcgcaagcctttaaatgtagtttg
tacaacattatcgccccagacggtgaaaacccttttgagtgggacgcaataacgactttg
tcttttaatcggtttgttgattctttctccaaaaaaacgacagagtttaaatgtacattt
tttgcaactgcttctttcaaaaaagaattgtttaacgttgtagatgttttcactcctttc
gccagcatttgcaaactgttagtagaacaaggccacgctaaacagttgtctcacagaaca
ctggtgccgtcagtccagctgcaaacatattattactccacgcatgatattaaaattggt
ggtgaggaagaagtttatattacctatgtcaacagttccttggagttttactgtcagctt
tcaagaaatactgaaacgatggatatgatagcatccgctactacacgtgtgtgcaatgaa
gtgaaaaaatttcaattgtctcctgggtctttgtgtcttgcaaaattcagcgatcagcag
tggtatcgttgctttactaatttcaataaaaacagcacagatgtattttttgtagattat
gggaatacagaaaaactgaccaaagaagaattgctccctataccaagtgatgcctacgaa
ctgctccatttcccaatgcaagcaattaaatgctctttatctgacatacctgacactata
cctagagaagtggtgttgtggtttgaaaaccttatacttgataaacccttgaaagcgtta
attgtcgccaaagaaactgatggtaaattaattgtagaattgtacgatggcagccaacaa
attaattcaagcatcaaagctaaattgggattgaagaatcctcgtacagaaggctatttt
gggaatgctgaaaaaagacaccagctaaatgatttagacaaaggtggaagaccagattct
gcatttaaattgtacaaccagggaagcaaattctcctcagatttagataatcattcccaa
aatggtttcactcatcagaaatctgcatcgtttgtggctaaagaaagggatcagtttgaa
caaaagccaaatctgagaacatctcggccctatatccaggacagagaagtgtattcagta
cgaaaaaatatatcccaaagtggttatgctcctcacaaaacaggagaatttagatctaaa
gatagagaagcattggagcaaagaccaaatctaaaaacctctgggatgtacagccaggga
agagaagtgtcaatgtcacagaatggttccaacagtggttttccacccaagaaaaccgga
ggctttaggtctaaagaaagagaagtgtctgaacacaagcagaatccagatgcttttaag
ggctacaaccaggaaagtaaaatgtctccgcagttacgtaatggttcacaaatggaagcg
tcttggtcttcagaaagtgatcggtcatctgagcacaagccagaaattaatgcatcgcag
cagagaaggtccacctttcaggagtgtaagtccataccgcctctaacaaaactaagtgac
ctgccgaagcaaaatattactccaggttttaaatcatctgtgtacatttcgcacacaaat
acacttagtgatttttatgtgcagattgcacaagacactgaactaagtaacatatctgag
atcttgaataatgaaaagaaaccctccgaccgactggatgaaaaagatgtgaatttggga
gacttgatttgtgctttttttgaagatgatgggctgtattatcgtgctgtcataacagaa
aaacactctgatggtttacaagtgcagtacatagattatggcaatactttaaccatacct
gccagccagatatataaacttccaccgagtttatcctctgctccagtaatgagtattttt
tgtgctttagacaaatgcactacagcagcgtgtgagcagaacatggatgatttgatggtt
aaattttctgaaagaactggtgatctagagttgagctgcgaatttgtgcaatgtaacaat
ctcaagtggaatgtgattttgtgtgatgatcaaggctgcataaacgacctctttatttct
gcctctgatcccttattaaatccaccttcactcgaagaacccgatgtaacttctgaacaa
ttaaatggtgtcagtcattatgtgtggaacctccctgcacttggtgagagggtagaggct
tatgcgagtgccgttgatagccctgaacatttttggtgccagctggtgacagccgatgtt
gactctttagcagttaaagttcaggaagctggagaacgttccgttcatgatggcaaattc
agtacagagatagaagttggttcaccttgtaatgtgatttacagtgaggataatcattgg
tacagagctgctgttactaagattgaagccgaccaagtgacagtacgattcgtcgactat
gggaacgaagaaatgcttcacctggaacaagtgcgaaggcttcccgctgatcttgccaca
attcctgctcaagcattttcatgttcccttgctggctttaatttatcagaggggtgctgg
aattcagatgcaaatacctttttctatgagaatgtcacagaaggacttttagtaatctct
gtgcttcatatacaagaacttgggccatgtaaaattccacaagcatctgtaaacgtaagt
tacaacggagaaaatgttaacactaaaatgagacagttttggcaggacagtaatgaaatt
cctaccccattcctggaatccttacatgcagaagaaattataaaagataataccatacct
tcccaagcagtagaggatgtggctgaccagtctgagcaaagtgaagagccttgtgccagc
gaattaacagagactccgacagtacccaccatgtactccaacgcagatggagaagaagtg
acggcaatcgatgaaacaaagcttgaagcccttcccttatcttccactgatgaagctgca
gagagcaccgaaaacacagatgttgacttaatgaggactgaatgtttactgcctgaaatc
cagaagagcagtgatctgtcctgtttagagctgaccctggatgaagatgttccaggttca
gctgttactcctttagccccagaagatctgtgcattgattatgatgaaagcaacatcaag
gagtcctactcagatattactgcaatggatcaaggagaattgcaccatactgaagatatc
gatctttggactccagctgctcatgatcaagaaattgccagttctgagataattgacaac
gtccctattgacaaagaatgtgactacagtgtgcaggaacccacagaagaaagctctgct
agcacaggactggaagagggtcctgcaccagagaaaaatgcattcactgagaacaatgat
ggtttagagccagaagctgccaatcttcaaagcaaaggagaagaatatctagtgccagag
gagagcacagttgctgtatgtgagagtgaggattttgagccagaagttgatgttgatctg
ccgagaaaggaaaatgaagacttacctgcatatacatatattccaataccggaggatgat
ggtgatggtttgggcagccccaaggaggcaaccagtcatgaaataggtgacgcagaaggc
ttgggagagcagaaccaagaactattggatcatacaatcagtgaatgcacaaatgatgat
tttgatgatctgccaagtaaagaacaagaaggtattcctttgcattcagatgctgatact
gattttgctgggactgaagatgtacctagggatatgaaaggtgacatagaggcaacgggg
agtcagaataaagaggatgtgacgctaggggaagacccagctactgaaaccgaatacagg
agttatttcttaaaggcagaagatgttgatcggccaagccaggaacataaagactttgca
gggcaagaggagaacccagttgctgaatacataaatgatatttctgagccagaatttgct
gatctgcaaagtgaagagcaaggagacacagtcacatatacagacactccgttcctagag
ggaggtgtggatgattttggcagcacagaagctaaatccagagataatacttatgaacat
gtaacggaggatgttgaagacctgaacacggaaaatcaagaaagccaagtacatgatgtt
agctctgacaaactctttaaagagtcagggcctactgacctacaagatcaagtggaatta
cagtatacagagcctgctgacagcgtttgtgatgtgcatcagagtgaggagtgtgaattt
gcagcacattttgatgagatcatagaaagccacagtccagagcacccagtactcgtggac
agcactgttgatgcgtgtgagcgagaggttgcagatctttgctatctgccagataaagtg
gaatcagaatgcacagtagcagaggacagcaccaaggacatgcaccagaataaagaatat
cagtgtgtgtttgatcctgtggaaaacatagaaagtcagactcaagaatgcccgctgcca
gcagacactttggataatgagtacacatgcactggtaatgagacagaatctgctaacatg
gaaaatatagaatttcaagagaaaccagtggtgtttggcatggagcagcctggcagtgat
gtatatgggcaaggtgtccatgtcctggaaagcccaacccattaccttcctttataa
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integrated database retrieval system
