Xenopus tropicalis (tropical clawed frog): 108644467
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Entry
108644467 CDS
T01011
Name
(RefSeq) gastrula zinc finger protein XlCGF57.1-like isoform X1
KO
K09228
KRAB domain-containing zinc finger protein
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
108644467
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
108644467
Transcription factors [BR:
xtr03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
108644467
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Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-C2H2_6
Zn-ribbon_8
zf-C2HE
C2CH-3rd_BIRD-IDD
zf-met
OSTMP1
zf-C2H2_11
ROS_MUCR
zf-HYPF
Motif
Other DBs
NCBI-GeneID:
108644467
NCBI-ProteinID:
XP_004915679
UniProt:
A0A8J0R4L8
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Position
6:3865964..3868939
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AA seq
394 aa
AA seq
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MKKIREDRSENIQANLSQTQTHKEFCKTSSNDWPPMPPEFGADGKSSVLRTQKLQDTGFR
ISFDCKECGESFGQQSKLEAHFLCHTGEKPFVCVHCGKGFKNKYKLNLHLRIHTGEKLSV
CPHCGKSYRDKTKLIVHLRIHTGEKPFVCTECGKGFRDSSSLKSHLRIHTGEKPFVCTEC
GKGFRKNHELKLHLHIHTGVNPFVCTECGKCFRDKSELNIHINVHTGKTFPCTECGKSFA
AKKNLKRHQKVHTGEKPHECTECGKRFLEKSKLDIHYRSHSGVKPFSCCECGEQFGWKHQ
LQYHQLSHTGERPFVCTECGKNFKTKAALTLHCYVHTGEKPLVCPECGKGCRDQTSLNSH
VRKHTGEKPFVCAECGKSYKDSSTLRHHLQTHIR
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagatcagagaagatagaagtgaaaacattcaggcgaacctcagccaaacccaa
actcacaaagaattttgcaaaacctccagtaatgattggcctccgatgcctccagagttt
ggtgctgatgggaaatcttctgttctgagaacacaaaagttacaagatactggtttcaga
atatcatttgactgcaaagagtgtggagaaagcttcgggcagcagtctaagcttgaagcc
cattttctgtgccacacaggtgagaagccatttgtctgtgttcattgtgggaaaggtttc
aagaataaatacaaacttaatctccatctaaggattcacacaggagagaagctttctgtc
tgtcctcattgtgggaaaagctacagagataagactaaactcattgttcatctaaggatt
cacacaggagagaaaccatttgtctgcactgagtgtgggaaaggcttcagggattcgagc
tctctgaaatctcacctccggattcacacaggagagaaaccgtttgtctgcactgagtgt
gggaaaggcttcaggaaaaaccatgaactcaaattgcaccttcatattcacaccggagtg
aacccatttgtctgcactgagtgtgggaaatgtttcagggataaaagtgaactgaacatt
catattaacgtacacacaggaaagactttcccctgtacggagtgtggcaaatcctttgca
gcaaagaagaatctgaaaaggcaccaaaaggttcacactggggagaaaccacatgagtgc
acagagtgtgggaaacgattcctggagaaaagtaaactggacatacattatcggagtcat
tcgggagtgaaaccattcagctgctgtgagtgtggagaacagtttggatggaaacaccag
ctccagtatcaccaactgagtcacaccggggagaggccatttgtctgtactgagtgtggg
aagaacttcaaaaccaaggctgcactcactctgcactgttatgttcacacaggggagaaa
ccattagtgtgccctgagtgtgggaaaggctgtagggaccagacgagcctcaatagtcat
gttcggaaacacacgggagagaaaccttttgtgtgcgccgagtgtgggaagagttacaag
gactccagtaccctgaggcaccaccttcagactcacattagatga
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