Xenopus tropicalis (tropical clawed frog): 108644777
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Entry
108644777 CDS
T01011
Name
(RefSeq) oocyte zinc finger protein XlCOF6.1-like
KO
K09228
KRAB domain-containing zinc finger protein
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
108644777
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
108644777
Transcription factors [BR:
xtr03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
108644777
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_11
C2CH-3rd_BIRD-IDD
zf_UBZ
zf-C2H2_jaz
Motif
Other DBs
NCBI-GeneID:
108644777
NCBI-ProteinID:
XP_017944996
UniProt:
A0A8J0SQC2
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All DBs
Position
9:3208585..3210099
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AA seq
422 aa
AA seq
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MGCSLNILKMKGNKNSLQSPHKSHATKTVGKYSCNECQKQFTYKRDYDKHHRTHKSKKPF
FSIRSNLKRHQITHTVETPFSCSECGKYFLSHSHLARHQRTHTGEKPFSCSECGKCFASK
SDLKGHQITHTGEKPFSCSECGKCFSKQSNLACHQRTHTGEKPFSCSECGKCFLTHSHLD
RHQRTHTGEKPFSCSECGKCLSSKSQLKIHYRTHTGEKPFSCSECGKCFSKQSDLKHHQI
THRGEKPFSCSECGKCFLNSSNLARHQRTHTGEKPFSCSECGKCFSKQSHLVCHQRTHTG
EKPFSCSECGKCFSNQFNLDRHQRIHTGEKPFSCSECGKCFSNQWYLKNHHRSHTGEAPF
TCECGKCFSNQSHLVCHQRTHTGEKPFSCSECSKCFPNRFNLDRHQRIHTREKPFSCSER
GK
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atggggtgcagcctgaacatcttaaaaatgaagggtaataaaaattccctccaatctcca
cataaatctcacgcaacaaaaactgtaggaaaatacagctgcaatgagtgtcagaaacaa
tttacttataagagagactatgataaacatcatagaacccacaaaagtaaaaaacccttt
ttttcaattcgatccaaccttaaacgccatcaaataacccacacagtggagacacctttt
tcttgttctgaatgtgggaaatattttttaagccattcacaccttgctcgtcatcaaagg
actcacacaggggagaaaccattctcttgttctgaatgtgggaaatgttttgcaagcaaa
tctgaccttaaaggccatcaaataacccacacaggggagaaaccattttcttgttctgaa
tgtggtaaatgtttttcaaagcaatctaaccttgcttgtcaccaaagaactcacacaggg
gagaaacctttttcttgttctgaatgtgggaaatgttttttaacccattcacaccttgat
cgtcatcaaaggactcacacaggggagaaaccattctcttgttctgaatgtgggaaatgt
ttgtcaagtaaatcacaacttaaaattcattatagaacccacacaggggagaaaccattt
tcttgttctgaatgtgggaaatgtttttcaaagcaatctgaccttaaacaccaccaaata
acccacagaggagagaaaccattttcttgttctgaatgtgggaaatgtttcttaaatagc
tctaaccttgctcgtcatcaaaggactcacacaggggagaaaccattctcttgttctgaa
tgtgggaaatgtttttcaaagcaatcccaccttgtttgtcatcaaaggactcacacaggg
gagaaaccattttcttgttctgaatgtggcaaatgtttttcaaatcaatttaaccttgat
cgtcatcagagaattcacacaggggagaaaccattttcttgttctgaatgtggcaaatgt
ttttcaaaccaatggtaccttaaaaatcatcatagaagccacacaggggaggcaccattt
acttgtgaatgtgggaaatgtttttcaaatcaatcccaccttgtttgtcatcaaaggact
cacacaggggagaaaccattttcttgttctgaatgtagcaaatgttttccaaatcgattt
aaccttgatcgtcatcagagaattcacacaagggagaaaccattttcttgttctgaacga
gggaaataa
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